RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	BAIAP2L2	Q6UXY1	529 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	FRRS1	Q6ZNA5	592 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF620	Q6ZNG0	422 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	C9orf40	Q8IXQ3	194 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF440	Q8IYI8	595 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR5W2	Q8NH69	310 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636		Q8WTZ3	238 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	RBP7	Q96R05	134 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR5B12	Q96R08	314 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	URM1	Q9BTM9	101 aa	Known RBP	4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR52D1	Q9H346	318 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	RERGL	Q9H628	205 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	WFDC1	Q9HC57	220 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	B3GAT2	Q9NPZ5	323 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	RBFOX1	Q9NWB1	397 aa	Known RBP	4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	TAS2R16	Q9NYV7	291 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	ABRACL	Q9P1F3	81 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	COPZ2	Q9P299	210 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	COMMD3	Q9UBI1	195 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	SLC7A7	Q9UM01	511 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	SLC7A11	Q9UPY5	501 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636	SLC35A3	Q9Y2D2	325 aa		4.08	□□□□□ -1.76
PABPC1-223	ENST00000523636		A0A0G2JMP0	313 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	TRBV5-5	A0A0J9YX44	114 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	CENPVL3	A0A0U1RRI6	287 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	C15orf65	H3BRN8	121 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	GABRP	O00591	440 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	PDCD5	O14737	125 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	LYRM1	O43325	122 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	HAND1	O96004	215 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	FGF2	P09038	288 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	SPN	P16150	400 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	TBP	P20226	339 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	C4BPB	P20851	252 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	HTR1D	P28221	377 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	GABRA3	P34903	492 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	RPL4	P36578	427 aa	Known RBP	4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	PTGDS	P41222	190 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	HCCS	P53701	268 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	GAS1	P54826	345 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	PAX9	P55771	341 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	DLX6	P56179	175 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	RAB38	P57729	211 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	RPS20	P60866	119 aa	Known RBP	4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	RPL27	P61353	136 aa	Known RBP	4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	RAP1A	P62834	184 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	RPS25	P62851	125 aa	Known RBP	4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	FABP5	Q01469	135 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	CD164	Q04900	197 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	CD300C	Q08708	224 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR2F1	Q13607	317 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	KLF9	Q13886	244 aa	Predicted RBP	4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	LAGE3	Q14657	143 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	GUCA2B	Q16661	112 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	DUSP5	Q16690	384 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	CEACAM21	Q3KPI0	293 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	DEFB134	Q4QY38	66 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	PAPPA-AS1	Q5QFB9	102 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF57	Q68EA5	555 aa	Predicted RBP	4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	HBM	Q6B0K9	141 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR8G2P	Q6IF36	304 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	C9orf139	Q6ZV77	190 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	CEACAM19	Q7Z692	300 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	OAF	Q86UD1	273 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	LRRC28	Q86X40	367 aa	Predicted RBP	4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	VKORC1L1	Q8N0U8	176 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	SMIM20	Q8N5G0	67 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	TEX45	Q8NA69	505 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR4F15	Q8NGB8	312 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR6F1	Q8NGZ6	308 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR2T27	Q8NH04	317 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR56B4	Q8NH76	319 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZFAND1	Q8TCF1	268 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF721	Q8TF20	911 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	ABHD3	Q8WU67	409 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	TMEM255B	Q8WV15	326 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	TNFAIP8L1	Q8WVP5	186 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	RASL10A	Q92737	203 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	TOMM40L	Q969M1	308 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	DUX3	Q96PT4	197 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	P2RX4	Q99571	388 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	SOST	Q9BQB4	213 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	WFDC6	Q9BQY6	131 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	CABLES2	Q9BTV7	478 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	TMEM59	Q9BXS4	323 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	AICDA	Q9GZX7	198 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	ARV1	Q9H2C2	271 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	CMC2	Q9NRP2	79 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	ING4	Q9UNL4	249 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	KCNE3	Q9Y6H6	103 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636		V9GYH0	126 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	LRP2	P98164	4655 aa		4.07	□□□□□ -1.76
PABPC1-223	ENST00000523636	TRAV1-2	A0A0B4J238	106 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	IGHV2-70D	A0A0C4DH43	119 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	IGLV5-39	A0A0G2JS06	123 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636		A0A0X1KG70	313 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR5B21	A6NL26	309 aa		4.06	□□□□□ -1.76
PABPC1-223	ENST00000523636	PPP5D1	E7EU14	171 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms