RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 ADIRFQ15847 76 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 ZSWIM7Q19AV6 140 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 TNFAIP8L2Q6P589 184 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-216ENST00000523088 TRIM40Q6P9F5 258 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 IQCF1Q8N6M8 205 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 ZNF433Q8N7K0 673 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-216ENST00000523088 C11orf44Q8N8P7 122 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 OR2T33Q8NG76 320 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 OR51A4Q8NGJ6 313 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 OR10G7Q8NGN6 311 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 NEUROG1Q92886 237 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 PSMG3-AS1Q96PY0 264 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 TSSK6Q9BXA6 273 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 OR2H1Q9GZK4 316 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 ZNF703Q9H7S9 590 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-216ENST00000523088 ST20Q9HBF5 79 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 NUDT4Q9NZJ9 180 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 GNG12Q9UBI6 72 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 OR5V1Q9UGF6 321 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 YTHDF2Q9Y5A9 579 aaKnown RBP6.32□□□□□ -1.4
HDAC3-216ENST00000523088 PCSK5Q92824 1860 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 SCN3AQ9NY46 2000 aa6.32□□□□□ -1.4
HDAC3-216ENST00000523088 IGHV1-45A0A0A0MS14 117 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 IGKV1-8A0A0C4DH67 115 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 LOC102723971A0A1B0GUV8 181 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 A0A1W2PP11 408 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 C7orf71A4D174 169 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 FAM90A27PA6NNH2 459 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 USP17L23D6RBM5 183 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 F8W1H4 67 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 RHODO00212 210 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 SFT2D2O95562 160 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 CYB5AP00167 134 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 GPX1P07203 203 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 PFN1P07737 140 aaKnown RBP6.31□□□□□ -1.4
HDAC3-216ENST00000523088 COX6A1P12074 109 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 CDAP32320 146 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 CA7P43166 264 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 HINT1P49773 126 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-216ENST00000523088 ZNF83P51522 516 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 TAS2R46P59540 309 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 CD164Q04900 197 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 PPP1R1AQ13522 171 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 PMCHL1Q16048 86 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 C4orf26Q17RF5 130 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 C1orf195Q5TG92 126 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 STAC2Q6ZMT1 411 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 ZNF66Q6ZN08 573 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 Q6ZSR3 168 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 OR4N5Q8IXE1 308 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 ABHD12Q8N2K0 398 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 DTWD1Q8N5C7 304 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 METTL27Q8N6F8 245 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-216ENST00000523088 TMEM229BQ8NBD8 167 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 ATP6V0E2Q8NHE4 81 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 SLC25A43Q8WUT9 341 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-216ENST00000523088 RNF166Q96A37 237 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-216ENST00000523088 ZNF488Q96MN9 340 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 SDF2Q99470 211 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 PRADC1Q9BSG0 188 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 MS4A6AQ9H2W1 248 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 SERTAD4Q9NUC0 356 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 KLHL13Q9P2N7 655 aa6.31□□□□□ -1.4
HDAC3-216ENST00000523088 TMEFF2Q9UIK5 374 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-216ENST00000523088 CHD3Q12873 2000 aaKnown RBP6.31□□□□□ -1.4
HDAC3-216ENST00000523088 ODAMA1E959 279 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 FNDC10F2Z333 226 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 H3BRM9 83 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 CHEK1O14757 476 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 FOXS1O43638 330 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 ENSAO43768 121 aaKnown RBP6.3□□□□□ -1.4
HDAC3-216ENST00000523088 ZIC3O60481 467 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 NKX2-2O95096 273 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 HLA-DRB1P01911 266 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 ZNF37AP17032 561 aaPredicted RBP6.3□□□□□ -1.4
HDAC3-216ENST00000523088 NTF3P20783 257 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 TACR1P25103 407 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 CRYBB3P26998 211 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 POLR2JP52435 117 aaKnown RBP6.3□□□□□ -1.4
HDAC3-216ENST00000523088 RPL31P62899 125 aaKnown RBP6.3□□□□□ -1.4
HDAC3-216ENST00000523088 EWSR1Q01844 656 aaKnown RBP eCLIP6.3□□□□□ -1.4
HDAC3-216ENST00000523088 CD69Q07108 199 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 SLC25A35Q3KQZ1 300 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 ZNF672Q499Z4 452 aaPredicted RBP6.3□□□□□ -1.4
HDAC3-216ENST00000523088 SPATA45Q537H7 98 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 SFXN4Q6P4A7 337 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 ZNF841Q6ZN19 808 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 SHISA6Q6ZSJ9 500 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 FAM19A1Q7Z5A9 133 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 MDS2Q8NDY4 140 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 OR8B12Q8NGG6 310 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 OR8S1Q8NH09 359 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 OR1L1Q8NH94 360 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 FNDC9Q8TBE3 224 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.3□□□□□ -1.4
HDAC3-216ENST00000523088 BORCS7Q96B45 105 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 AP1S3Q96PC3 154 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 TMEM70Q9BUB7 260 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 C19orf24Q9BVV8 132 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 PELI2Q9HAT8 420 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms