RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 STX12Q86Y82 276 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 OR5AN1Q8NGI8 311 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 OR4A16Q8NH70 328 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 GPR146Q96CH1 333 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 PHYHIPLQ96FC7 376 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 PCGF1Q9BSM1 259 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 RNF126Q9BV68 326 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 MRPL20Q9BYC9 149 aaKnown RBP6.9□□□□□ -1.3
VAPB-206ENST00000520497 SLC35D1Q9NTN3 355 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 OR5AC2Q9NZP5 309 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 U3KQ87 197 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 MARCH11A6NNE9 402 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 H0YJW9 148 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 H7C2Y5 167 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 SYNGR2O43760 224 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 ARG1P05089 322 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 P0C879 139 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 G6PCP35575 357 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 CAV2P51636 162 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 TAS2R30P59541 319 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 RPP30P78346 268 aaKnown RBP6.89□□□□□ -1.31
VAPB-206ENST00000520497 IFITM2Q01629 132 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 MINOS1Q5TGZ0 78 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 TGIF2LXQ8IUE1 241 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 OR2C3Q8N628 320 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 MAPK1IP1LQ8NDC0 245 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 ZNF680Q8NEM1 530 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 OSR1Q8TAX0 266 aaPredicted RBP6.89□□□□□ -1.31
VAPB-206ENST00000520497 LRRC20Q8TCA0 184 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 SCARB1Q8WTV0 552 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 AJUBAQ96IF1 538 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 NABP2Q9BQ15 211 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 HIF1ANQ9NWT6 349 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 DPM3Q9P2X0 92 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 TBL2Q9Y4P3 447 aaKnown RBP6.89□□□□□ -1.31
VAPB-206ENST00000520497 MINOS1-NBL1R4GNA1 71 aa6.89□□□□□ -1.31
VAPB-206ENST00000520497 IGHV1-3A0A0C4DH29 117 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 A0A0G2JRQ6 117 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 CENPVL3A0A0U1RRI6 287 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 A0A1W2PPI3 338 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 LEUTXA8MZ59 168 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 H0YIZ8 118 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 J3QLI3 93 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 PITX3O75364 302 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 DFFBO76075 338 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 JTBO76095 146 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 SPDEFO95238 335 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 CRYZL1O95825 349 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 IGKV1-5P01602 117 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 GAPDHP04406 335 aaKnown RBP6.88□□□□□ -1.31
VAPB-206ENST00000520497 HKR1P10072 659 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 HTR1DP28221 377 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 REG1BP48304 166 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 HBG1P69891 147 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 HBG2P69892 147 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 ID3Q02535 119 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 EXOSC2Q13868 293 aaKnown RBP6.88□□□□□ -1.31
VAPB-206ENST00000520497 HABP2Q14520 560 aaPredicted RBP6.88□□□□□ -1.31
VAPB-206ENST00000520497 ZNF266Q14584 549 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 MIDNQ504T8 468 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 TPTE2P1Q5T6R2 138 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 LHFPL4Q7Z7J7 247 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 PDPNQ86YL7 162 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 OR8H3Q8N146 312 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 VSTM2AQ8TAG5 236 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 STOML3Q8TAV4 291 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 ST8SIA2Q92186 375 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 LHX4Q969G2 390 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 ENY2Q9NPA8 101 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 LYRM2Q9NU23 88 aaPredicted RBP6.88□□□□□ -1.31
VAPB-206ENST00000520497 FKBP11Q9NYL4 201 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 NUP50Q9UKX7 468 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 WASHC3Q9Y3C0 194 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 AUP1Q9Y679 476 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 WSB1Q9Y6I7 421 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 MTORP42345 2549 aa6.88□□□□□ -1.31
VAPB-206ENST00000520497 TRAV40A0A0B4J280 105 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 LOC100996750A0A140TA64 210 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 CEBPZOSA8MTT3 80 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 OOSP1A8MZH6 123 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 SHOXO15266 292 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 TGFAP01135 160 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 AVPP01185 164 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 IFNA17P01571 189 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 IGKV1-16P04430 117 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 SAA4P35542 130 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 HTR2BP41595 481 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 POLR2GP62487 172 aaKnown RBP eCLIP6.87□□□□□ -1.31
VAPB-206ENST00000520497 EWSR1Q01844 656 aaKnown RBP eCLIP6.87□□□□□ -1.31
VAPB-206ENST00000520497 TNFRSF9Q07011 255 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 POU2AF1Q16633 256 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 VMA21Q3ZAQ7 101 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 TMEM177Q53S58 311 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 CXorf66Q5JRM2 361 aaPredicted RBP6.87□□□□□ -1.31
VAPB-206ENST00000520497 LCE2AQ5TA79 106 aaPredicted RBP6.87□□□□□ -1.31
VAPB-206ENST00000520497 MRPL41Q8IXM3 137 aaKnown RBP6.87□□□□□ -1.31
VAPB-206ENST00000520497 PDZD9Q8IXQ8 264 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 DYNAPQ8N1N2 210 aa6.87□□□□□ -1.31
VAPB-206ENST00000520497 CIARTQ8N365 385 aaPredicted RBP6.87□□□□□ -1.31
VAPB-206ENST00000520497 OR4C13Q8NGP0 309 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms