RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	PLA2G7	Q13093	441 aa		11.71	□□□□□ -0.53
LMNA-223	ENST00000515459	ARFRP1	Q13795	201 aa		11.71	□□□□□ -0.53
LMNA-223	ENST00000515459	LGALS9C	Q6DKI2	356 aa		11.71	□□□□□ -0.53
LMNA-223	ENST00000515459	SLC38A6	Q8IZM9	456 aa		11.71	□□□□□ -0.53
LMNA-223	ENST00000515459	VKORC1L1	Q8N0U8	176 aa		11.71	□□□□□ -0.53
LMNA-223	ENST00000515459	OR2C3	Q8N628	320 aa		11.71	□□□□□ -0.53
LMNA-223	ENST00000515459	TMEM217	Q8N7C4	229 aa		11.71	□□□□□ -0.53
LMNA-223	ENST00000515459	ZNF645	Q8N7E2	425 aa		11.71	□□□□□ -0.53
LMNA-223	ENST00000515459	OR10R2	Q8NGX6	335 aa		11.71	□□□□□ -0.53
LMNA-223	ENST00000515459	VSTM2A	Q8TAG5	236 aa		11.71	□□□□□ -0.53
LMNA-223	ENST00000515459	OR2A7	Q96R45	310 aa		11.71	□□□□□ -0.53
LMNA-223	ENST00000515459		V9GY05	133 aa		11.71	□□□□□ -0.53
LMNA-223	ENST00000515459	TRBV7-1	A0A0A6YYK4	115 aa		11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	PTGES3L	E9PB15	166 aa		11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	MFNG	O00587	321 aa		11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	CRYGC	P07315	174 aa		11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	ZNF735	P0CB33	412 aa		11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	C8orf88	P0DMB2	117 aa		11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	HIST1H1B	P16401	226 aa	Known RBP	11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	CD36	P16671	472 aa		11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	PSMB6	P28072	239 aa		11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	MAS1L	P35410	378 aa		11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	TALDO1	P37837	337 aa		11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	TRAM1	Q15629	374 aa		11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	ZNF585B	Q52M93	769 aa		11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	OR2B11	Q5JQS5	317 aa		11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	UNQ9165/PRO28630	Q6UXU0	137 aa		11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	TMEM167A	Q8TBQ9	72 aa		11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	MRPL27	Q9P0M9	148 aa	Known RBP	11.7	□□□□□ -0.54
LMNA-223	ENST00000515459	IGKV1D-8	A0A087WSZ0	117 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	KIR2DL5B	A0A0G2JN68	375 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	KIR2DL5B	A0A0G2JPC4	375 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459		J3QRK9	145 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	CLEC3B	P05452	202 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	AREG	P15514	252 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	HIST1H1D	P16402	221 aa	Known RBP	11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	GAL	P22466	123 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	CALR	P27797	417 aa	Known RBP	11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	PSMD7	P51665	324 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	RPS25	P62851	125 aa	Known RBP	11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	RPL30	P62888	115 aa	Known RBP	11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	KLK9	Q2XQG4	91 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	HES5	Q5TA89	166 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459		Q6ZS49	121 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	KIR2DL5A	Q8N109	375 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	STPG3	Q8N7X2	389 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	KIR2DL5B	Q8NHK3	375 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	RNF183	Q96D59	192 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	CXorf58	Q96LI9	332 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	SPAG8	Q99932	426 aa	Predicted RBP	11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	UBQLN2	Q9UHD9	624 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	KLK9	Q9UKQ9	250 aa		11.69	□□□□□ -0.54
LMNA-223	ENST00000515459	RBMX2	Q9Y388	322 aa	Known RBP	11.69	□□□□□ -0.54
LMNA-223	ENST00000515459		A0A1B0GW64	132 aa		11.68	□□□□□ -0.54
LMNA-223	ENST00000515459	RAB27B	O00194	218 aa		11.68	□□□□□ -0.54
LMNA-223	ENST00000515459	SLC22A5	O76082	557 aa		11.68	□□□□□ -0.54
LMNA-223	ENST00000515459	HSMCR30	P0CW71	290 aa		11.68	□□□□□ -0.54
LMNA-223	ENST00000515459	DEFA4	P12838	97 aa		11.68	□□□□□ -0.54
LMNA-223	ENST00000515459	CTRB1	P17538	263 aa		11.68	□□□□□ -0.54
LMNA-223	ENST00000515459	PSMA1	P25786	263 aa	Known RBP	11.68	□□□□□ -0.54
LMNA-223	ENST00000515459	ELL	P55199	621 aa	Predicted RBP	11.68	□□□□□ -0.54
LMNA-223	ENST00000515459	SSX1	Q16384	188 aa		11.68	□□□□□ -0.54
LMNA-223	ENST00000515459	CTRB2	Q6GPI1	263 aa		11.68	□□□□□ -0.54
LMNA-223	ENST00000515459	PUSL1	Q8N0Z8	303 aa	Known RBP	11.68	□□□□□ -0.54
LMNA-223	ENST00000515459	OR4S2	Q8NH73	311 aa		11.68	□□□□□ -0.54
LMNA-223	ENST00000515459	C5orf66	Q9H5L9	145 aa		11.68	□□□□□ -0.54
LMNA-223	ENST00000515459	UFC1	Q9Y3C8	167 aa		11.68	□□□□□ -0.54
LMNA-223	ENST00000515459	OR2W1	Q9Y3N9	320 aa		11.68	□□□□□ -0.54
LMNA-223	ENST00000515459	MFSD2B	A6NFX1	497 aa		11.67	□□□□□ -0.54
LMNA-223	ENST00000515459	HLA-DQB1	P01920	261 aa		11.67	□□□□□ -0.54
LMNA-223	ENST00000515459	MYOD1	P15172	320 aa		11.67	□□□□□ -0.54
LMNA-223	ENST00000515459	CRHBP	P24387	322 aa		11.67	□□□□□ -0.54
LMNA-223	ENST00000515459	HSD17B10	Q99714	261 aa	Known RBP	11.67	□□□□□ -0.54
LMNA-223	ENST00000515459	IGLV11-55	A0A075B6I3	123 aa		11.66	□□□□□ -0.54
LMNA-223	ENST00000515459	METTL21EP	A6NDL7	271 aa		11.66	□□□□□ -0.54
LMNA-223	ENST00000515459	TSPAN4	O14817	238 aa		11.66	□□□□□ -0.54
LMNA-223	ENST00000515459	IGLV2-14	P01704	120 aa		11.66	□□□□□ -0.54
LMNA-223	ENST00000515459	REG1A	P05451	166 aa		11.66	□□□□□ -0.54
LMNA-223	ENST00000515459	NFYA	P23511	347 aa	Predicted RBP	11.66	□□□□□ -0.54
LMNA-223	ENST00000515459	GPR183	P32249	361 aa		11.66	□□□□□ -0.54
LMNA-223	ENST00000515459	RPL8	P62917	257 aa	Known RBP	11.66	□□□□□ -0.54
LMNA-223	ENST00000515459	IRF3	Q14653	427 aa		11.66	□□□□□ -0.54
LMNA-223	ENST00000515459	PLET1	Q6UQ28	207 aa		11.66	□□□□□ -0.54
LMNA-223	ENST00000515459	TCTEX1D2	Q8WW35	142 aa		11.66	□□□□□ -0.54
LMNA-223	ENST00000515459	SCN3B	Q9NY72	215 aa		11.66	□□□□□ -0.54
LMNA-223	ENST00000515459	SPATA2	Q9UM82	520 aa		11.66	□□□□□ -0.54
LMNA-223	ENST00000515459	IGHV3-35	A0A0C4DH35	117 aa		11.65	□□□□□ -0.54
LMNA-223	ENST00000515459	HRAS	P01112	189 aa		11.65	□□□□□ -0.54
LMNA-223	ENST00000515459	CTXN2	P0C2S0	81 aa		11.65	□□□□□ -0.54
LMNA-223	ENST00000515459	RAB6A	P20340	208 aa		11.65	□□□□□ -0.54
LMNA-223	ENST00000515459	DTYMK	P23919	212 aa		11.65	□□□□□ -0.54
LMNA-223	ENST00000515459	FABP5	Q01469	135 aa		11.65	□□□□□ -0.54
LMNA-223	ENST00000515459	LAMTOR1	Q6IAA8	161 aa		11.65	□□□□□ -0.54
LMNA-223	ENST00000515459	SSX9	Q7RTT3	188 aa		11.65	□□□□□ -0.54
LMNA-223	ENST00000515459	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.65	□□□□□ -0.54
LMNA-223	ENST00000515459	HERC2	O95714	4834 aa		11.65	□□□□□ -0.55
LMNA-223	ENST00000515459	HLA-G	P17693	338 aa		11.64	□□□□□ -0.55
LMNA-223	ENST00000515459	RPL35A	P18077	110 aa	Known RBP	11.64	□□□□□ -0.55
LMNA-223	ENST00000515459	BRWD1-AS2	P59051	145 aa		11.64	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms