RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 CGB7P0DN87 165 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 GATA4P43694 442 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 C17orf58Q2M2W7 97 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 CST9LP1Q5W188 147 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 ABHD12Q8N2K0 398 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 LEAP2Q969E1 77 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 DMRT1Q9Y5R6 373 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 SVILO95425 2214 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 HCFC1P51610 2035 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 THBS3P49746 956 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 RTP5Q14D33 572 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 CT45A1Q5HYN5 189 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 OR4X1Q8NH49 305 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 CT45A3Q8NHU0 189 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 MS4A5Q9H3V2 200 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 PATZ1Q9HBE1 687 aaKnown RBP14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 KCNIP2Q9NS61 270 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 C15orf61A6NNL5 157 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 PRSS46E5RG02 174 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 UBE2G2P60604 165 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 FAM201AQ5SY85 155 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 FAM222BQ8WU58 562 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 NPVFQ9HCQ7 196 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 ENY2Q9NPA8 101 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 PXMP4Q9Y6I8 212 aa14.8□□□□□ -0.04
CCHCR1-228ENST00000509552 DSPP15924 2871 aaKnown RBP14.79□□□□□ -0.04
CCHCR1-228ENST00000509552 F6UZH7 168 aa14.79□□□□□ -0.04
CCHCR1-228ENST00000509552 SELLP14151 372 aa14.79□□□□□ -0.04
CCHCR1-228ENST00000509552 RPRMLQ8N4K4 120 aa14.79□□□□□ -0.04
CCHCR1-228ENST00000509552 SDSLQ96GA7 329 aa14.79□□□□□ -0.04
CCHCR1-228ENST00000509552 ADTRPQ96IZ2 230 aa14.79□□□□□ -0.04
CCHCR1-228ENST00000509552 RHOVQ96L33 236 aa14.79□□□□□ -0.04
CCHCR1-228ENST00000509552 MGST2Q99735 147 aa14.79□□□□□ -0.04
CCHCR1-228ENST00000509552 OTOGLQ3ZCN5 2332 aa14.79□□□□□ -0.04
CCHCR1-228ENST00000509552 SAA2-SAA4A0A096LPE2 208 aa14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 SAA2P0DJI9 122 aaPredicted RBP14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 FABP4P15090 132 aa14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 TIMP3P35625 211 aa14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 SRP14P37108 136 aaKnown RBP14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 FAM3BP58499 235 aaPredicted RBP14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 TNFAIP6P98066 277 aaPredicted RBP14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 PFDN5Q99471 154 aa14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 TXNDC17Q9BRA2 123 aa14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 GGTLC1Q9BX51 225 aa14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 IL19Q9UHD0 177 aa14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 A0A1W2PPQ1 181 aa14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 TNFSF4P23510 183 aa14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 NPPCP23582 126 aa14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 MRPS11P82912 194 aaKnown RBP14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 KCNIP4Q6PIL6 250 aa14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 Q6ZS92 163 aa14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 C1orf229Q6ZS94 237 aaPredicted RBP14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 LYG1Q8N1E2 194 aa14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 OR5T1Q8NG75 326 aa14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 SFXN3Q9BWM7 321 aa14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 GCM1Q9NP62 436 aa14.78□□□□□ -0.04
CCHCR1-228ENST00000509552 EP300Q09472 2414 aaPredicted RBP14.77□□□□□ -0.04
CCHCR1-228ENST00000509552 TRAV20A0A0B4J274 112 aa14.77□□□□□ -0.04
CCHCR1-228ENST00000509552 CXorf1O96002 111 aa14.77□□□□□ -0.04
CCHCR1-228ENST00000509552 ATP5G3P48201 142 aa14.77□□□□□ -0.04
CCHCR1-228ENST00000509552 HSPE1P61604 102 aaKnown RBP14.77□□□□□ -0.04
CCHCR1-228ENST00000509552 GNB1P62873 340 aa14.77□□□□□ -0.04
CCHCR1-228ENST00000509552 MIC13Q5XKP0 118 aa14.77□□□□□ -0.04
CCHCR1-228ENST00000509552 OR4A47Q6IF82 309 aa14.77□□□□□ -0.04
CCHCR1-228ENST00000509552 OR2T10Q8NGZ9 312 aa14.77□□□□□ -0.04
CCHCR1-228ENST00000509552 PCGF1Q9BSM1 259 aa14.77□□□□□ -0.04
CCHCR1-228ENST00000509552 ELOVL1Q9BW60 279 aa14.77□□□□□ -0.04
CCHCR1-228ENST00000509552 FOXA2Q9Y261 457 aaPredicted RBP14.77□□□□□ -0.04
CCHCR1-228ENST00000509552 STAG3L2P0CL84 134 aa14.77□□□□□ -0.05
CCHCR1-228ENST00000509552 STAG3L3P0CL85 134 aa14.77□□□□□ -0.05
CCHCR1-228ENST00000509552 NPY1RP25929 384 aa14.77□□□□□ -0.05
CCHCR1-228ENST00000509552 STUMQ69YW2 141 aa14.77□□□□□ -0.05
CCHCR1-228ENST00000509552 SLC24A4Q8NFF2 622 aa14.77□□□□□ -0.05
CCHCR1-228ENST00000509552 TMEM170AQ8WVE7 144 aa14.77□□□□□ -0.05
CCHCR1-228ENST00000509552 TMPRSS2O15393 492 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 NDUFB4O95168 129 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 IGHV1-46P01743 117 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 CRYABP02511 175 aaKnown RBP14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 ARL14EPLP0DKL9 152 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 BMP5P22003 454 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 RAB31Q13636 194 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 UTF1Q5T230 341 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 TMEM183AQ8IXX5 376 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 ZNF383Q8NA42 475 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 DEFB108BQ8NET1 73 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 TMEM14BQ9NUH8 114 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 CD99P14209 185 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 CLEC12BQ2HXU8 276 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 TEPPQ6URK8 271 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 LINC01551Q86U37 167 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 PACRGQ96M98 296 aaPredicted RBP14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 IDI2-AS1Q9NZ38 188 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 CADP27708 2225 aa14.76□□□□□ -0.05
CCHCR1-228ENST00000509552 ZNF729A6NN14 1252 aaPredicted RBP14.75□□□□□ -0.05
CCHCR1-228ENST00000509552 GGCTO75223 188 aaKnown RBP14.75□□□□□ -0.05
CCHCR1-228ENST00000509552 IRF2P14316 349 aa14.75□□□□□ -0.05
CCHCR1-228ENST00000509552 DUX4L9Q6RFH8 374 aaPredicted RBP14.75□□□□□ -0.05
CCHCR1-228ENST00000509552 GAFA1Q96PS6 74 aa14.75□□□□□ -0.05
CCHCR1-228ENST00000509552 LSM4Q9Y4Z0 139 aaKnown RBP14.75□□□□□ -0.05
CCHCR1-228ENST00000509552 SPENQ96T58 3664 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms