RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ARPC1BO15143 372 aaKnown RBP11.76□□□□□ -0.53
RNF4-210ENST00000508235 MPPED1O15442 326 aa11.76□□□□□ -0.53
RNF4-210ENST00000508235 CTSDP07339 412 aaPredicted RBP11.76□□□□□ -0.53
RNF4-210ENST00000508235 EGR2P11161 476 aaPredicted RBP11.76□□□□□ -0.53
RNF4-210ENST00000508235 RPL23AP62750 156 aaKnown RBP11.76□□□□□ -0.53
RNF4-210ENST00000508235 PJVKQ0ZLH3 352 aa11.76□□□□□ -0.53
RNF4-210ENST00000508235 FAAP20Q6NZ36 180 aa11.76□□□□□ -0.53
RNF4-210ENST00000508235 VKORC1L1Q8N0U8 176 aa11.76□□□□□ -0.53
RNF4-210ENST00000508235 RNF152Q8N8N0 203 aa11.76□□□□□ -0.53
RNF4-210ENST00000508235 DMBX1Q8NFW5 382 aa11.76□□□□□ -0.53
RNF4-210ENST00000508235 OR51S1Q8NGJ8 323 aa11.76□□□□□ -0.53
RNF4-210ENST00000508235 OR5M8Q8NGP6 311 aa11.76□□□□□ -0.53
RNF4-210ENST00000508235 OR13C8Q8NGS7 320 aa11.76□□□□□ -0.53
RNF4-210ENST00000508235 TMEM167AQ8TBQ9 72 aa11.76□□□□□ -0.53
RNF4-210ENST00000508235 MARCH1Q8TCQ1 289 aa11.76□□□□□ -0.53
RNF4-210ENST00000508235 PHB2Q99623 299 aa11.76□□□□□ -0.53
RNF4-210ENST00000508235 ZNF430Q9H8G1 570 aaPredicted RBP11.76□□□□□ -0.53
RNF4-210ENST00000508235 HRASLSQ9HDD0 168 aa11.76□□□□□ -0.53
RNF4-210ENST00000508235 FBXO7Q9Y3I1 522 aa11.76□□□□□ -0.53
RNF4-210ENST00000508235 A0A1W2PN81 502 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 A0A1W2PRX2 142 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 B3GALNT1O75752 331 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 S1PR2O95136 353 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 IGLV1-40P01703 118 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 SERPINE2P07093 398 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 FGF2P09038 288 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 PF4V1P10720 104 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 PSMB8P28062 276 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 CHRNA7P36544 502 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 LPAR6P43657 344 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 KLF9Q13886 244 aaPredicted RBP11.75□□□□□ -0.53
RNF4-210ENST00000508235 CNPY1Q3B7I2 92 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 C19orf54Q5BKX5 351 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 OR4A47Q6IF82 309 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 TREML4Q6UXN2 200 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 SSX9Q7RTT3 188 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 CADM3Q8N126 398 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 LFNGQ8NES3 379 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 R3HDM4Q96D70 268 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 SPIN2AQ99865 258 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 SPIN2BQ9BPZ2 258 aa11.75□□□□□ -0.53
RNF4-210ENST00000508235 FAM103A1Q9BTL3 118 aaKnown RBP11.75□□□□□ -0.53
RNF4-210ENST00000508235 MARCH11A6NNE9 402 aa11.74□□□□□ -0.53
RNF4-210ENST00000508235 ADARB2-AS1A8MUL3 147 aa11.74□□□□□ -0.53
RNF4-210ENST00000508235 H0Y980 276 aa11.74□□□□□ -0.53
RNF4-210ENST00000508235 TSPAN15O95858 294 aa11.74□□□□□ -0.53
RNF4-210ENST00000508235 RPA2P15927 270 aa11.74□□□□□ -0.53
RNF4-210ENST00000508235 PI3P19957 117 aa11.74□□□□□ -0.53
RNF4-210ENST00000508235 RPL8P62917 257 aaKnown RBP11.74□□□□□ -0.53
RNF4-210ENST00000508235 MRGPRG-AS1Q2M3A8 158 aa11.74□□□□□ -0.53
RNF4-210ENST00000508235 TRIQKQ629K1 86 aa11.74□□□□□ -0.53
RNF4-210ENST00000508235 ZNF57Q68EA5 555 aaPredicted RBP11.74□□□□□ -0.53
RNF4-210ENST00000508235 SRSF12Q8WXF0 261 aaKnown RBP11.74□□□□□ -0.53
RNF4-210ENST00000508235 SLA2Q9H6Q3 261 aa11.74□□□□□ -0.53
RNF4-210ENST00000508235 C3orf85A0A1B0GTC6 90 aa11.73□□□□□ -0.53
RNF4-210ENST00000508235 MSGN1A6NI15 193 aa11.73□□□□□ -0.53
RNF4-210ENST00000508235 NUDT19A8MXV4 375 aa11.73□□□□□ -0.53
RNF4-210ENST00000508235 H3BUA1 57 aa11.73□□□□□ -0.53
RNF4-210ENST00000508235 ATG12O94817 140 aa11.73□□□□□ -0.53
RNF4-210ENST00000508235 RPLP1P05386 114 aaKnown RBP11.73□□□□□ -0.53
RNF4-210ENST00000508235 CDX1P47902 265 aaPredicted RBP11.73□□□□□ -0.53
RNF4-210ENST00000508235 SSBP2P81877 361 aaPredicted RBP11.73□□□□□ -0.53
RNF4-210ENST00000508235 ZNF585BQ52M93 769 aa11.73□□□□□ -0.53
RNF4-210ENST00000508235 HIST2H2BDQ6DRA6 164 aa11.73□□□□□ -0.53
RNF4-210ENST00000508235 ZNF695Q8IW36 515 aa11.73□□□□□ -0.53
RNF4-210ENST00000508235 MRGPRFQ96AM1 343 aa11.73□□□□□ -0.53
RNF4-210ENST00000508235 TMEM140Q9NV12 185 aa11.73□□□□□ -0.53
RNF4-210ENST00000508235 GPR132Q9UNW8 380 aa11.73□□□□□ -0.53
RNF4-210ENST00000508235 TEX13DA0A0J9YY54 714 aaPredicted RBP11.72□□□□□ -0.53
RNF4-210ENST00000508235 UPK2O00526 184 aa11.72□□□□□ -0.53
RNF4-210ENST00000508235 SNAPC5O75971 98 aa11.72□□□□□ -0.53
RNF4-210ENST00000508235 KRASP01116 189 aa11.72□□□□□ -0.53
RNF4-210ENST00000508235 HLA-GP17693 338 aa11.72□□□□□ -0.53
RNF4-210ENST00000508235 RPL27AP46776 148 aaKnown RBP11.72□□□□□ -0.53
RNF4-210ENST00000508235 RAB9AP51151 201 aa11.72□□□□□ -0.53
RNF4-210ENST00000508235 KLHL30-AS1Q8NEE0 82 aa11.72□□□□□ -0.53
RNF4-210ENST00000508235 FAM110DQ8TAY7 271 aaPredicted RBP11.72□□□□□ -0.53
RNF4-210ENST00000508235 MYOZ3Q8TDC0 251 aa11.72□□□□□ -0.53
RNF4-210ENST00000508235 S100ZQ8WXG8 99 aa11.72□□□□□ -0.53
RNF4-210ENST00000508235 UBE2E2Q96LR5 201 aa11.72□□□□□ -0.53
RNF4-210ENST00000508235 TSC22D3Q99576 134 aa11.72□□□□□ -0.53
RNF4-210ENST00000508235 COMMD5Q9GZQ3 224 aa11.72□□□□□ -0.53
RNF4-210ENST00000508235 PTTG2Q9NZH5 202 aa11.72□□□□□ -0.53
RNF4-210ENST00000508235 TNCP24821 2201 aa11.71□□□□□ -0.53
RNF4-210ENST00000508235 NAP1L6A6NFF2 107 aa11.71□□□□□ -0.53
RNF4-210ENST00000508235 CENPXA8MT69 81 aa11.71□□□□□ -0.53
RNF4-210ENST00000508235 BRI3O95415 125 aa11.71□□□□□ -0.53
RNF4-210ENST00000508235 PF4P02776 101 aa11.71□□□□□ -0.53
RNF4-210ENST00000508235 IL6RP08887 468 aaPredicted RBP11.71□□□□□ -0.53
RNF4-210ENST00000508235 G6PCP35575 357 aa11.71□□□□□ -0.53
RNF4-210ENST00000508235 SLC25A42Q86VD7 318 aa11.71□□□□□ -0.53
RNF4-210ENST00000508235 C4orf3Q8WVX3 66 aa11.71□□□□□ -0.53
RNF4-210ENST00000508235 SLC25A21Q9BQT8 299 aaPredicted RBP11.71□□□□□ -0.53
RNF4-210ENST00000508235 RTBDNQ9BSG5 229 aaPredicted RBP11.71□□□□□ -0.53
RNF4-210ENST00000508235 C5orf66Q9H5L9 145 aa11.71□□□□□ -0.53
RNF4-210ENST00000508235 ZNF355PQ9NSJ1 428 aa11.71□□□□□ -0.53
RNF4-210ENST00000508235 SOX15O60248 233 aa11.7□□□□□ -0.54
RNF4-210ENST00000508235 OR9G9P0C7N8 305 aa11.7□□□□□ -0.54
RNF4-210ENST00000508235 BAK1Q16611 211 aa11.7□□□□□ -0.54
RNF4-210ENST00000508235 TRIM16LQ309B1 348 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms