RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 MUC5BQ9HC84 5762 aaPredicted RBP0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 TRAV7A0A075B6U4 112 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 TRAPPC13A5PLN9 417 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 MEIS3P1A6NDR6 274 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 GOLGA8MH3BSY2 632 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 H3BT86 120 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 NDUFS6O75380 124 aaKnown RBP0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 CIAO1O76071 339 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 APOMO95445 188 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 YEATS4O95619 227 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 TPM3P06753 285 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 MSMBP08118 114 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 LGALS1P09382 135 aaKnown RBP0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 TRGC1P0CF51 173 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 CXCL2P19875 107 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 CXCL3P19876 107 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 KRTAP10-4P60372 401 aaPredicted RBP0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 RAB14P61106 215 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 B2MP61769 119 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 RPS24P62847 133 aaKnown RBP0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 EMX1Q04741 257 aaPredicted RBP0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 PLCXD2Q0VAA5 305 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 CDK5R1Q15078 307 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 C4orf26Q17RF5 130 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 LRRC26Q2I0M4 334 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 DEFB115Q30KQ5 88 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 FAM78BQ5VT40 261 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 HIST2H3AQ71DI3 136 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 RPP25LQ8N5L8 163 aaKnown RBP0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 ACOT12Q8WYK0 555 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 CCL13Q99616 98 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 PARD6GQ9BYG4 376 aaPredicted RBP0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 CHST6Q9GZX3 395 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 UCK1Q9HA47 277 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 NAT8Q9UHE5 227 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 SNURFQ9Y675 71 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 DSCAMO60469 2012 aa0.67□□□□□ -2.3
AC008539.1-201ENST00000507653 COL6A6A6NMZ7 2263 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 FN1P02751 2386 aaKnown RBP0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 A0A0D9SEW6 157 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 TMEM269A0A1B0GVZ9 245 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 SDCBPO00560 298 aaPredicted RBP0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 ADAP1O75689 374 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 APOEP02649 317 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 NFYAP23511 347 aaPredicted RBP0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 RPL28P46779 137 aaKnown RBP0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 AQP4P55087 323 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 MAP3K7CLP57077 242 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 CXCR4P61073 352 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 POLR2GP62487 172 aaKnown RBP eCLIP0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 RPL30P62888 115 aaKnown RBP0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 JOSD1Q15040 202 aaPredicted RBP0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 ARHGAP11BQ3KRB8 267 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 PLEKHG7Q6ZR37 379 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 FAM19A5Q7Z5A7 132 aaPredicted RBP0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 KRT222Q8N1A0 295 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 Q8N402 240 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 CDC26Q8NHZ8 85 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 HAVCR2Q8TDQ0 301 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 DDI1Q8WTU0 396 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 GNPNAT1Q96EK6 184 aaPredicted RBP0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 C7orf50Q9BRJ6 194 aaKnown RBP0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 BBS2Q9BXC9 721 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 DERL2Q9GZP9 239 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 MS4A6AQ9H2W1 248 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 GPR84Q9NQS5 396 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 AK3Q9UIJ7 227 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 TIMM22Q9Y584 194 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 ADCY9O60503 1353 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 WDR90Q96KV7 1748 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 SIPA1L1O43166 1804 aa0.66□□□□□ -2.3
AC008539.1-201ENST00000507653 TMED7-TICAM2A0A0A6YYA0 188 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 IGHV1-69-2A0A0G2JMI3 117 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 LOC105371267A0A1B0GV96 52 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 FUOMA2VDF0 154 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 C21orf140B9A014 251 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 DISC1C4P0D8 188 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 COX7A2LO14548 114 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 ITGB1BP1O14713 200 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 SLC22A1O15245 554 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 CALUO43852 315 aaPredicted RBP0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 OR5F1O95221 314 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 PPBPP02775 128 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 METTL15P1P0C7V9 234 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 UGT2B7P16662 529 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 PSMB6P28072 239 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 PPP1R2P41236 205 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 CSN1S1P47710 185 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 RAB13P51153 203 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 MRPS15P82914 257 aaKnown RBP0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 FABP9Q0Z7S8 132 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 COTL1Q14019 142 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 SURF2Q15527 256 aaPredicted RBP0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 MOGQ16653 247 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 CDKL4Q5MAI5 379 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 PPP1R2P3Q6NXS1 205 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 C8orf74Q6P047 294 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 GPHB5Q86YW7 130 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 FUNDC1Q8IVP5 155 aa0.65□□□□□ -2.31
AC008539.1-201ENST00000507653 SLC22A24Q8N4F4 322 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms