RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ZNF615Q8N8J6 731 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 SPANXA2-OT1Q8N9U9 137 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZFP62Q8NB50 900 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 OR13C8Q8NGS7 320 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 OR13D1Q8NGV5 346 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 SGMS2Q8NHU3 365 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 GPR119Q8TDV5 335 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 RAB2BQ8WUD1 216 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 C11orf40Q8WZ69 217 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 GPR146Q96CH1 333 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 MALSU1Q96EH3 234 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 RNF5Q99942 180 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 TSSK6Q9BXA6 273 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 MAP1LC3BQ9GZQ8 125 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 GABARAPL1Q9H0R8 117 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 OR2D2Q9H210 308 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 SPANXCQ9NY87 97 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 RPUSD1Q9UJJ7 312 aaKnown RBP1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 COQ4Q9Y3A0 265 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 DOCK8Q8NF50 2099 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 TSPOAP1O95153 1857 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 AHDC1Q5TGY3 1603 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 TONSLQ96HA7 1378 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 TRBV20OR9-2A0A075B6H5 130 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 IGLV2-18A0A075B6J9 118 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 TRAV9-1A0A075B6T8 112 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 IGSF23A1L1A6 192 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 PRORSD1PA6NEY8 169 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 SIGLEC16A6NMB1 481 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 A8MUN3 132 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 C9JCJ5 164 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 E7EQ34 232 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 M0QZK8 103 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 LST1O00453 97 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 KPNA4O00629 521 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 HMGB3O15347 200 aaKnown RBP1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 MFSD11O43934 449 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 PIAS1O75925 651 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF682O95780 498 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 LHBP01229 141 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 SRP19P09132 144 aaKnown RBP1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 SMIM10L2AP0DMW4 78 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 SMIM10L2BP0DMW5 78 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 IGHV3-30-3P0DP02 117 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 CPMP14384 443 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 TGFBR1P36897 503 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF140P52738 457 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 TPI1P60174 286 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 NCALDP61601 193 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 TBPL1P62380 186 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 FKBP1AP62942 108 aaKnown RBP1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 FLI1Q01543 452 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 TNFAIP8L3Q5GJ75 292 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 WDR59Q6PJI9 974 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 Q6Q795 121 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 AMTNQ6UX39 209 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 Q6ZS49 121 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 HMGN2P46Q86SG4 172 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 GPHB5Q86YW7 130 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 SGPP2Q8IWX5 399 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 C12orf45Q8N5I9 185 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 EIF4E3Q8N5X7 224 aaKnown RBP1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 RNF182Q8N6D2 247 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 GRPEL2Q8TAA5 225 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF721Q8TF20 911 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 DEDD2Q8WXF8 326 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 LZICQ8WZA0 190 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 KLK6Q92876 244 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 BORCS5Q969J3 196 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 DNAJC30Q96LL9 226 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 C2orf50Q96LR7 162 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 IP6K3Q96PC2 410 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 PLA2G12AQ9BZM1 189 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 WDR61Q9GZS3 305 aaKnown RBP1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 CHST6Q9GZX3 395 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 PBOV1Q9GZY1 135 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 TMEM222Q9H0R3 208 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 FBXL12Q9NXK8 326 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 TVP23BQ9NYZ1 205 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 SS18L2Q9UHA2 77 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 LAMTOR3Q9UHA4 124 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF230Q9UIE0 474 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 ERGIC3Q9Y282 383 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 PHLDA3Q9Y5J5 127 aa1.37□□□□□ -2.19
HMGB1P35-201ENST00000503360 ANKRD12Q6UB98 2062 aa1.36□□□□□ -2.19
HMGB1P35-201ENST00000503360 CPDO75976 1380 aa1.36□□□□□ -2.19
HMGB1P35-201ENST00000503360 THSD7AQ9UPZ6 1657 aa1.36□□□□□ -2.19
HMGB1P35-201ENST00000503360 MYO5BQ9ULV0 1848 aa1.36□□□□□ -2.19
HMGB1P35-201ENST00000503360 TRBV19A0A075B6N1 114 aa1.36□□□□□ -2.19
HMGB1P35-201ENST00000503360 IGKV1-12A0A0C4DH73 117 aa1.36□□□□□ -2.19
HMGB1P35-201ENST00000503360 A0A0J9YY10 115 aa1.36□□□□□ -2.19
HMGB1P35-201ENST00000503360 TMEM269A0A1B0GVZ9 245 aa1.36□□□□□ -2.19
HMGB1P35-201ENST00000503360 A0A1B0GX78 115 aa1.36□□□□□ -2.19
HMGB1P35-201ENST00000503360 A0A1W2PRE2 83 aa1.36□□□□□ -2.19
HMGB1P35-201ENST00000503360 A6NED7 52 aa1.36□□□□□ -2.19
HMGB1P35-201ENST00000503360 EFCAB10A6NFE3 127 aa1.36□□□□□ -2.19
HMGB1P35-201ENST00000503360 J3QRK9 145 aa1.36□□□□□ -2.19
HMGB1P35-201ENST00000503360 SLC17A3O00476 420 aa1.36□□□□□ -2.19
HMGB1P35-201ENST00000503360 SH2D1AO60880 128 aa1.36□□□□□ -2.19
HMGB1P35-201ENST00000503360 NDUFB2O95178 105 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms