RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 C10orf55Q5SWW7 151 aa15.22■□□□□ 0.03
HDAC4-212ENST00000495497 TEX38Q6PEX7 206 aa15.22■□□□□ 0.03
HDAC4-212ENST00000495497 UNQ5815/PRO19632Q6UWF5 114 aa15.22■□□□□ 0.03
HDAC4-212ENST00000495497 TMEM167AQ8TBQ9 72 aa15.22■□□□□ 0.03
HDAC4-212ENST00000495497 ZNF580Q9UK33 172 aa15.22■□□□□ 0.03
HDAC4-212ENST00000495497 C14orf166Q9Y224 244 aaKnown RBP15.22■□□□□ 0.03
HDAC4-212ENST00000495497 VSIG4Q9Y279 399 aa15.22■□□□□ 0.03
HDAC4-212ENST00000495497 PLXNB1O43157 2135 aa15.22■□□□□ 0.03
HDAC4-212ENST00000495497 A0A1W2PN81 502 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 TSPAN15O95858 294 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 IGKV1-39P01597 117 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 IGKV1D-39P04432 117 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 RPLP1P05386 114 aaKnown RBP15.21■□□□□ 0.03
HDAC4-212ENST00000495497 APELAP0DMC3 54 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 IL7P13232 177 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 G6PCP35575 357 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 CHRNA7P36544 502 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 ECI1P42126 302 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 SURF2Q15527 256 aaPredicted RBP15.21■□□□□ 0.03
HDAC4-212ENST00000495497 SP6Q3SY56 376 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 C18orf65Q6ZTR6 163 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 MMD2Q8IY49 270 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 TCTEX1D1Q8N7M0 179 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 CCDC71LQ8N9Z2 235 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 MINDY2Q8NBR6 621 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 ADAD2Q8NCV1 583 aaKnown RBP15.21■□□□□ 0.03
HDAC4-212ENST00000495497 DMBX1Q8NFW5 382 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 VSTM2AQ8TAG5 236 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 CASTOR1Q8WTX7 329 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 TP53RKQ96S44 253 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 TMEM140Q9NV12 185 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 COMMD9Q9P000 198 aa15.21■□□□□ 0.03
HDAC4-212ENST00000495497 C3orf85A0A1B0GTC6 90 aa15.2■□□□□ 0.02
HDAC4-212ENST00000495497 MSGN1A6NI15 193 aa15.2■□□□□ 0.02
HDAC4-212ENST00000495497 M0QZ24 198 aa15.2■□□□□ 0.02
HDAC4-212ENST00000495497 SOX15O60248 233 aa15.2■□□□□ 0.02
HDAC4-212ENST00000495497 KRASP01116 189 aa15.2■□□□□ 0.02
HDAC4-212ENST00000495497 IGHG4P01861 327 aa15.2■□□□□ 0.02
HDAC4-212ENST00000495497 POU2AF1Q16633 256 aa15.2■□□□□ 0.02
HDAC4-212ENST00000495497 ASPHD1Q5U4P2 390 aa15.2■□□□□ 0.02
HDAC4-212ENST00000495497 NDUFA11Q86Y39 141 aa15.2■□□□□ 0.02
HDAC4-212ENST00000495497 SRSF12Q8WXF0 261 aaKnown RBP15.2■□□□□ 0.02
HDAC4-212ENST00000495497 KLK15Q9H2R5 256 aa15.2■□□□□ 0.02
HDAC4-212ENST00000495497 BET1LQ9NYM9 111 aa15.2■□□□□ 0.02
HDAC4-212ENST00000495497 TSSC4Q9Y5U2 329 aaPredicted RBP15.2■□□□□ 0.02
HDAC4-212ENST00000495497 MARCH11A6NNE9 402 aa15.19■□□□□ 0.02
HDAC4-212ENST00000495497 UPK2O00526 184 aa15.19■□□□□ 0.02
HDAC4-212ENST00000495497 OPN1MWP04001 364 aa15.19■□□□□ 0.02
HDAC4-212ENST00000495497 IL6RP08887 468 aaPredicted RBP15.19■□□□□ 0.02
HDAC4-212ENST00000495497 OPN1MW2P0DN77 364 aa15.19■□□□□ 0.02
HDAC4-212ENST00000495497 OPN1MW3P0DN78 364 aa15.19■□□□□ 0.02
HDAC4-212ENST00000495497 TMEM267Q0VDI3 215 aaPredicted RBP15.19■□□□□ 0.02
HDAC4-212ENST00000495497 FOXE3Q13461 319 aa15.19■□□□□ 0.02
HDAC4-212ENST00000495497 AKIRIN2Q53H80 203 aa15.19■□□□□ 0.02
HDAC4-212ENST00000495497 LINC00299Q6ZSB3 139 aa15.19■□□□□ 0.02
HDAC4-212ENST00000495497 COMMD1Q8N668 190 aa15.19■□□□□ 0.02
HDAC4-212ENST00000495497 PHB2Q99623 299 aa15.19■□□□□ 0.02
HDAC4-212ENST00000495497 AIFM2Q9BRQ8 373 aa15.19■□□□□ 0.02
HDAC4-212ENST00000495497 TET2Q6N021 2002 aaPredicted RBP15.18■□□□□ 0.02
HDAC4-212ENST00000495497 E7EUB6 86 aa15.18■□□□□ 0.02
HDAC4-212ENST00000495497 H0Y980 276 aa15.18■□□□□ 0.02
HDAC4-212ENST00000495497 ACTL6BO94805 426 aa15.18■□□□□ 0.02
HDAC4-212ENST00000495497 IGLV1-40P01703 118 aa15.18■□□□□ 0.02
HDAC4-212ENST00000495497 SERPINE2P07093 398 aa15.18■□□□□ 0.02
HDAC4-212ENST00000495497 ELANEP08246 267 aa15.18■□□□□ 0.02
HDAC4-212ENST00000495497 PF4V1P10720 104 aa15.18■□□□□ 0.02
HDAC4-212ENST00000495497 PSMB8P28062 276 aa15.18■□□□□ 0.02
HDAC4-212ENST00000495497 CCR6P51684 374 aa15.18■□□□□ 0.02
HDAC4-212ENST00000495497 ERVK-16P61578 105 aa15.18■□□□□ 0.02
HDAC4-212ENST00000495497 RPL8P62917 257 aaKnown RBP15.18■□□□□ 0.02
HDAC4-212ENST00000495497 C2orf68Q2NKX9 166 aa15.18■□□□□ 0.02
HDAC4-212ENST00000495497 CXorf66Q5JRM2 361 aaPredicted RBP15.18■□□□□ 0.02
HDAC4-212ENST00000495497 OR5T1Q8NG75 326 aa15.18■□□□□ 0.02
HDAC4-212ENST00000495497 OR4A5Q8NH83 315 aa15.18■□□□□ 0.02
HDAC4-212ENST00000495497 FAM110DQ8TAY7 271 aaPredicted RBP15.18■□□□□ 0.02
HDAC4-212ENST00000495497 TMEM230Q96A57 120 aa15.18■□□□□ 0.02
HDAC4-212ENST00000495497 NAA60Q9H7X0 242 aa15.18■□□□□ 0.02
HDAC4-212ENST00000495497 FAM212BQ9NTI7 297 aaPredicted RBP15.18■□□□□ 0.02
HDAC4-212ENST00000495497 FOXA2Q9Y261 457 aaPredicted RBP15.18■□□□□ 0.02
HDAC4-212ENST00000495497 NSG2Q9Y328 171 aa15.18■□□□□ 0.02
HDAC4-212ENST00000495497 TEX13DA0A0J9YY54 714 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-212ENST00000495497 CREBL2O60519 120 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-212ENST00000495497 OR5AC1P0C628 307 aa15.17■□□□□ 0.02
HDAC4-212ENST00000495497 OR9G9P0C7N8 305 aa15.17■□□□□ 0.02
HDAC4-212ENST00000495497 RPL23AP62750 156 aaKnown RBP15.17■□□□□ 0.02
HDAC4-212ENST00000495497 DEDD2Q8WXF8 326 aa15.17■□□□□ 0.02
HDAC4-212ENST00000495497 S100ZQ8WXG8 99 aa15.17■□□□□ 0.02
HDAC4-212ENST00000495497 SEC22AQ96IW7 307 aa15.17■□□□□ 0.02
HDAC4-212ENST00000495497 MS4A10Q96PG2 267 aa15.17■□□□□ 0.02
HDAC4-212ENST00000495497 A0A1B0GW64 132 aa15.16■□□□□ 0.02
HDAC4-212ENST00000495497 HMX3A6NHT5 357 aa15.16■□□□□ 0.02
HDAC4-212ENST00000495497 CRYM-AS1A6NIL9 109 aa15.16■□□□□ 0.02
HDAC4-212ENST00000495497 AKR1C4P17516 323 aa15.16■□□□□ 0.02
HDAC4-212ENST00000495497 HLA-GP17693 338 aa15.16■□□□□ 0.02
HDAC4-212ENST00000495497 RPL27AP46776 148 aaKnown RBP15.16■□□□□ 0.02
HDAC4-212ENST00000495497 TRIM16LQ309B1 348 aa15.16■□□□□ 0.02
HDAC4-212ENST00000495497 PRR31Q5SQ13 230 aa15.16■□□□□ 0.02
HDAC4-212ENST00000495497 TMEM65Q6PI78 240 aa15.16■□□□□ 0.02
HDAC4-212ENST00000495497 RNF152Q8N8N0 203 aa15.16■□□□□ 0.02
HDAC4-212ENST00000495497 SCGB3A2Q96PL1 93 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms