RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 NPPCP23582 126 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 CRHBPP24387 322 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 CA7P43166 264 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 CD151P48509 253 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 HINT1P49773 126 aaPredicted RBP0.82□□□□□ -2.28
ITGB1-216ENST00000493758 HERVK_113P63121 156 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 SKP1P63208 163 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 C4orf26Q17RF5 130 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 MESTQ5EB52 335 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.82□□□□□ -2.28
ITGB1-216ENST00000493758 LCN8Q6JVE9 175 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 DNM1P34Q6PK57 102 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 AGTRAPQ6RW13 159 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 AMTNQ6UX39 209 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 PLEKHG7Q6ZR37 379 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 C2orf91Q6ZV80 131 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 FUNDC1Q8IVP5 155 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 OR4X2Q8NGF9 303 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 OR2D3Q8NGH3 330 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 PPCDCQ96CD2 204 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 ZNF514Q96K75 400 aaPredicted RBP0.82□□□□□ -2.28
ITGB1-216ENST00000493758 MIEN1Q9BRT3 115 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 TIMM21Q9BVV7 248 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 TIPINQ9BVW5 301 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 NKX6-2Q9C056 277 aaPredicted RBP0.82□□□□□ -2.28
ITGB1-216ENST00000493758 NRBP2Q9NSY0 501 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 HDGFL3Q9Y3E1 203 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 DCHS2Q6V1P9 2916 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 FAM135AQ9P2D6 1515 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 PTPRZ1P23471 2315 aaPredicted RBP0.82□□□□□ -2.28
ITGB1-216ENST00000493758 TARBP1Q13395 1621 aaKnown RBP0.82□□□□□ -2.28
ITGB1-216ENST00000493758 USP32Q8NFA0 1604 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 GVINP1Q7Z2Y8 2422 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 CROCC2H7BZ55 1655 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 FSIP2Q5CZC0 6907 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 RGPD1P0DJD0 1748 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 TEX14Q8IWB6 1497 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 MXRA5Q9NR99 2828 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 TEX50A0A1B0GTY4 177 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 AZIN1O14977 448 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 ATP8B1O43520 1251 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 HPGDSO60760 199 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 IGHV1-69P01742 117 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 ATP5G1P05496 136 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 HIST1H1CP16403 213 aaKnown RBP0.81□□□□□ -2.28
ITGB1-216ENST00000493758 PSMB6P28072 239 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 CD40LGP29965 261 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 PEBP1P30086 187 aaKnown RBP0.81□□□□□ -2.28
ITGB1-216ENST00000493758 MIPP30301 263 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 OR10J1P30954 320 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 CD79BP40259 229 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 CDK9P50750 372 aaKnown RBP0.81□□□□□ -2.28
ITGB1-216ENST00000493758 CLDN12P56749 244 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 LINC00313P59037 77 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 HPCAP84074 193 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 GNA12Q03113 381 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 TMEM267Q0VDI3 215 aaPredicted RBP0.81□□□□□ -2.28
ITGB1-216ENST00000493758 EBPQ15125 230 aaKnown RBP0.81□□□□□ -2.28
ITGB1-216ENST00000493758 TMEM31Q5JXX7 168 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 PDPK2PQ6A1A2 396 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 DRAM2Q6UX65 266 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 GLT6D1Q7Z4J2 308 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 CD302Q8IX05 232 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 BAP18Q8IXM2 172 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 FAM9CQ8IZT9 166 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 SLC35F6Q8N357 371 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 OR10D3Q8NH80 312 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 C10orf105Q8TEF2 133 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 Q8WTZ3 238 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 DNAJB3Q8WWF6 145 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 FGF13Q92913 245 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 MS4A6EQ96DS6 147 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 PACRGQ96M98 296 aaPredicted RBP0.81□□□□□ -2.28
ITGB1-216ENST00000493758 DHRS9Q9BPW9 319 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 GNB1LQ9BYB4 327 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 UPF3BQ9BZI7 483 aaKnown RBP0.81□□□□□ -2.28
ITGB1-216ENST00000493758 SLC22A4Q9H015 551 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 NSRP1Q9H0G5 558 aaKnown RBP0.81□□□□□ -2.28
ITGB1-216ENST00000493758 WDR54Q9H977 334 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 SLC2A9Q9NRM0 540 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 EMC3Q9P0I2 261 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 TP53TG1Q9Y2A0 90 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 GLI3P10071 1580 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 CACNA1SQ13698 1873 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 TENM2Q9NT68 2774 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 ZNF638Q14966 1978 aaKnown RBP0.81□□□□□ -2.28
ITGB1-216ENST00000493758 KDM5AP29375 1690 aaKnown RBP0.81□□□□□ -2.28
ITGB1-216ENST00000493758 A0A1W2PP64 1363 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 POLR1AO95602 1720 aaPredicted RBP0.81□□□□□ -2.28
ITGB1-216ENST00000493758 RIMS2Q9UQ26 1411 aa0.81□□□□□ -2.28
ITGB1-216ENST00000493758 ARHGAP32A7KAX9 2087 aa0.8□□□□□ -2.28
ITGB1-216ENST00000493758 ITPR2Q14571 2701 aa0.8□□□□□ -2.28
ITGB1-216ENST00000493758 ATAD5Q96QE3 1844 aa0.8□□□□□ -2.28
ITGB1-216ENST00000493758 ARHGEF12Q9NZN5 1544 aa0.8□□□□□ -2.28
ITGB1-216ENST00000493758 FAT4Q6V0I7 4981 aa0.8□□□□□ -2.28
ITGB1-216ENST00000493758 ABCA8O94911 1581 aa0.8□□□□□ -2.28
ITGB1-216ENST00000493758 CEP295Q9C0D2 2601 aa0.8□□□□□ -2.28
ITGB1-216ENST00000493758 PREX2Q70Z35 1606 aa0.8□□□□□ -2.28
ITGB1-216ENST00000493758 C1orf232A0A0U1RR37 186 aa0.8□□□□□ -2.28
ITGB1-216ENST00000493758 TINCRA0A1B0GVN0 87 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms