RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 RHOGP84095 191 aa7.06□□□□□ -1.28
HDAC6-232ENST00000489053 KIAA0141Q14154 515 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-232ENST00000489053 RPEL1Q2QD12 228 aa7.06□□□□□ -1.28
HDAC6-232ENST00000489053 FAM209BQ5JX69 171 aa7.06□□□□□ -1.28
HDAC6-232ENST00000489053 FAM223AQ8IWN6 122 aa7.06□□□□□ -1.28
HDAC6-232ENST00000489053 OR6F1Q8NGZ6 308 aa7.06□□□□□ -1.28
HDAC6-232ENST00000489053 C15orf40Q8WUR7 153 aa7.06□□□□□ -1.28
HDAC6-232ENST00000489053 GIMAP1Q8WWP7 306 aa7.06□□□□□ -1.28
HDAC6-232ENST00000489053 SNAPC3Q92966 411 aa7.06□□□□□ -1.28
HDAC6-232ENST00000489053 ZNF2Q9BSG1 426 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-232ENST00000489053 MRPS26Q9BYN8 205 aaKnown RBP7.06□□□□□ -1.28
HDAC6-232ENST00000489053 COMMD5Q9GZQ3 224 aa7.06□□□□□ -1.28
HDAC6-232ENST00000489053 SCPEP1Q9HB40 452 aa7.06□□□□□ -1.28
HDAC6-232ENST00000489053 PEF1Q9UBV8 284 aaKnown RBP7.06□□□□□ -1.28
HDAC6-232ENST00000489053 RGS5O15539 181 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 HPRT1P00492 218 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 RLN1P04808 185 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 EIF4EP06730 217 aaKnown RBP7.05□□□□□ -1.28
HDAC6-232ENST00000489053 NQO2P16083 231 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 HLA-GP17693 338 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 RCVRNP35243 200 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 RFX2P48378 723 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 TAS2R31P59538 309 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 EXOSC2Q13868 293 aaKnown RBP7.05□□□□□ -1.28
HDAC6-232ENST00000489053 GPR107Q5VW38 600 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 LPCAT3Q6P1A2 487 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 NECAP1Q8NC96 275 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 OR4A5Q8NH83 315 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 TMEM167AQ8TBQ9 72 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 CMTM3Q96MX0 182 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 PEMTQ9UBM1 199 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 ADAM30Q9UKF2 790 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 ZNF257Q9Y2Q1 563 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 TENM3Q9P273 2699 aa7.05□□□□□ -1.28
HDAC6-232ENST00000489053 RBFOX2O43251 390 aaKnown RBP eCLIP7.04□□□□□ -1.28
HDAC6-232ENST00000489053 HPGDSO60760 199 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 SNAPC5O75971 98 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 PRH1P02810 166 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 HIST1H1BP16401 226 aaKnown RBP7.04□□□□□ -1.28
HDAC6-232ENST00000489053 ZNF182P17025 639 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-232ENST00000489053 HRH1P35367 487 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 DEFA5Q01523 94 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 DYRK1AQ13627 763 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 RNASE12Q5GAN4 147 aaKnown RBP7.04□□□□□ -1.28
HDAC6-232ENST00000489053 C10orf55Q5SWW7 151 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 ASPHD1Q5U4P2 390 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 OR4A47Q6IF82 309 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 ACSM6Q6P461 480 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 ZNF818PQ6ZRF7 136 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 ADAD2Q8NCV1 583 aaKnown RBP7.04□□□□□ -1.28
HDAC6-232ENST00000489053 MOB3AQ96BX8 217 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 GPHA2Q96T91 129 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 B9D2Q9BPU9 175 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 HINT2Q9BX68 163 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 COMMD9Q9P000 198 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 SCOCQ9UIL1 159 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 SMAD5-AS1Q9Y6J3 95 aa7.04□□□□□ -1.28
HDAC6-232ENST00000489053 HMX3A6NHT5 357 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 TRIM64CA6NLI5 447 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 H0Y980 276 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 GPR31O00270 319 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 RBMXL2O75526 392 aaKnown RBP7.03□□□□□ -1.28
HDAC6-232ENST00000489053 OR2J3O76001 311 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 GABARAPO95166 117 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 BRI3O95415 125 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 IGLV2-14P01704 120 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 NHLRC4P0CG21 123 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-232ENST00000489053 PGAM2P15259 253 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 RPA2P15927 270 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 ELK1P19419 428 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 MECP2P51608 486 aaKnown RBP7.03□□□□□ -1.28
HDAC6-232ENST00000489053 SYNJ2BPP57105 145 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 SSBP2P81877 361 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-232ENST00000489053 C15orf32Q32M92 178 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 RNASE10Q5GAN6 216 aaKnown RBP7.03□□□□□ -1.28
HDAC6-232ENST00000489053 VAX1Q5SQQ9 334 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 TTC9CQ8N5M4 171 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 OR9G4Q8NGQ1 327 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 DYNLRB2Q8TF09 96 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 PLEKHA2Q9HB19 425 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 AKIP1Q9NQ31 210 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 TMEM140Q9NV12 185 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 BET1LQ9NYM9 111 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 THYN1Q9P016 225 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 EXTL2Q9UBQ6 330 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 FBXL7Q9UJT9 491 aa7.03□□□□□ -1.28
HDAC6-232ENST00000489053 NPIPB5A8MRT5 1133 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 S1PR2O95136 353 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 SERPINE2P07093 398 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 GP9P14770 177 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 SPNP16150 400 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 F2RP25116 425 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 LPAR6P43657 344 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 PHLDA2Q53GA4 152 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 LCN12Q6JVE5 192 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 ZNF343Q6P1L6 599 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 DHRS11Q6UWP2 260 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 HSD17B13Q7Z5P4 300 aaPredicted RBP7.02□□□□□ -1.29
HDAC6-232ENST00000489053 GTSCR1Q86UQ5 136 aa7.02□□□□□ -1.29
HDAC6-232ENST00000489053 CLVS1Q8IUQ0 354 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms