RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 CA10Q9NS85 328 aa3.64□□□□□ -1.83
R3HDM1-216ENST00000483065 RPUSD1Q9UJJ7 312 aaKnown RBP3.64□□□□□ -1.83
R3HDM1-216ENST00000483065 COQ4Q9Y3A0 265 aa3.64□□□□□ -1.83
R3HDM1-216ENST00000483065 MED31Q9Y3C7 131 aa3.64□□□□□ -1.83
R3HDM1-216ENST00000483065 MRPS16Q9Y3D3 137 aaKnown RBP3.64□□□□□ -1.83
R3HDM1-216ENST00000483065 TMEM14AQ9Y6G1 99 aa3.64□□□□□ -1.83
R3HDM1-216ENST00000483065 THSD7AQ9UPZ6 1657 aa3.64□□□□□ -1.83
R3HDM1-216ENST00000483065 A2MP01023 1474 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 MEIS3P1A6NDR6 274 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 ZFP92A6NM28 416 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 H0YJW9 148 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 RBFOX2O43251 390 aaKnown RBP eCLIP3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 DPM2O94777 84 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 OR2H2O95918 312 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 S100A8P05109 93 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 UCHL1P09936 223 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 S100A7P31151 101 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 NDUFA6P56556 154 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 WNT4P56705 351 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 FGF12P61328 243 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 PLCXD2Q0VAA5 305 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 KRTAP15-1Q3LI76 137 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 RNASE13Q5GAN3 156 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 RNASE10Q5GAN6 216 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 C3orf62Q6ZUJ4 267 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 OR10D4PQ8NGN7 298 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 ZNF721Q8TF20 911 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 ARL11Q969Q4 196 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 C1orf147Q96MC9 270 aaPredicted RBP3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 NRTNQ99748 197 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 C11orf68Q9H3H3 251 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 TCEAL2Q9H3H9 227 aaPredicted RBP3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 TUBA4BQ9H853 241 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 POPDC3Q9HBV1 291 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 SND1-IT1Q9HBX3 110 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 GNG8Q9UK08 70 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 PRSS21Q9Y6M0 314 aa3.63□□□□□ -1.83
R3HDM1-216ENST00000483065 TMEM131Q92545 1883 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 OVOS2A0A0J9YW53 1432 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 OVOS2Q6IE36 1432 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 CD109Q6YHK3 1445 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 LRRK1Q38SD2 2015 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 A0A0J9YWU9 116 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 IRGMA1A4Y4 181 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 A8MUN3 132 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 IGLL5B9A064 214 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 C9JCJ5 164 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 CLDN25C9JDP6 229 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 OVOL1O14753 267 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 ZNF207O43670 478 aaKnown RBP3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 GGCTO75223 188 aaKnown RBP3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 LY6G6DO95868 133 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 IGKV1-39P01597 117 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 IGKV1D-39P04432 117 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 HTR1AP08908 422 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 RPL7P18124 248 aaKnown RBP3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 S100A4P26447 101 aaKnown RBP3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 CD200P41217 278 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 GABRA2P47869 451 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 YPEL3P61236 119 aaPredicted RBP3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 NCS1P62166 190 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 RPS11P62280 158 aaKnown RBP eCLIP3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 ENDOGQ14249 297 aaKnown RBP3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 TMEM69Q5SWH9 247 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 BCL2L15Q5TBC7 163 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 FAM104BQ5XKR9 115 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 WDR86Q86TI4 376 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 MARCH3Q86UD3 253 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 RPS4Y2Q8TD47 263 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 NARS2Q96I59 477 aaKnown RBP3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 PEBP4Q96S96 227 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 CACYBPQ9HB71 228 aaKnown RBP3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 SDF2L1Q9HCN8 221 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 ZNRD1Q9P1U0 126 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 TRAPPC2LQ9UL33 140 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 CYSLTR1Q9Y271 337 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 AMMECR1Q9Y4X0 333 aaPredicted RBP3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 HEY1Q9Y5J3 304 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 CSAG2Q9Y5P2 127 aa3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 EIF4G3O43432 1585 aaKnown RBP3.62□□□□□ -1.83
R3HDM1-216ENST00000483065 NEO1Q92859 1461 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 IGHV3-21A0A0B4J1V1 117 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 IGHV3-43A0A0B4J1X8 118 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 C9JAW5 83 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 TXNDC9O14530 226 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 RPS3P23396 243 aaKnown RBP eCLIP3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 HIST1H2BOP23527 126 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 HIST1H2BBP33778 126 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 DAPP51397 102 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 HIST1H2BDP58876 126 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 KRTAP10-6P60371 365 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 HIST1H2BCP62807 126 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 EIF3IQ13347 325 aaKnown RBP3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 TAF9Q16594 264 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 HIST2H2BEQ16778 126 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 RTL8BQ17RB0 113 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 FKBP1CQ5VVH2 108 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 SLC25A34Q6PIV7 304 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms