RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SPTBN1Q01082 2364 aaKnown RBP4.7□□□□□ -1.66
USF3-202ENST00000478658 OVOL1O14753 267 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 GYPBP06028 91 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 CGB7P0DN87 165 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 DRD3P35462 400 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 TIAL1Q01085 375 aaKnown RBP eCLIP4.7□□□□□ -1.66
USF3-202ENST00000478658 ZNF48Q96MX3 618 aaPredicted RBP4.7□□□□□ -1.66
USF3-202ENST00000478658 C21orf62Q9NYP8 219 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 ZNF729A6NN14 1252 aaPredicted RBP4.69□□□□□ -1.66
USF3-202ENST00000478658 PFN1P07737 140 aaKnown RBP4.69□□□□□ -1.66
USF3-202ENST00000478658 DCTDP32321 178 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 SAMD5Q5TGI4 173 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 FAM74A4Q5TZK3 123 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 FAM72BQ86X60 149 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 TRAV5A0A0B4J249 113 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 CTAG2O75638 210 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 B4GALT1P15291 398 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 HOXB4P17483 251 aaPredicted RBP4.69□□□□□ -1.66
USF3-202ENST00000478658 KISS1Q15726 138 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 C14orf177Q52M58 125 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 TEX38Q6PEX7 206 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 TTC9BQ8N6N2 239 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 NT5CQ8TCD5 201 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 DOCK1Q14185 1865 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 TMEM178BH3BS89 294 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 SBK3P0C264 359 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 OR11H6Q8NGC7 330 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 ITLN2Q8WWU7 325 aaPredicted RBP4.69□□□□□ -1.66
USF3-202ENST00000478658 R4GN57 208 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 IGKV3OR2-268A0A0C4DH90 116 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 A0A1B0GUT8 65 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 TAX1BP3O14907 124 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 CGB3P0DN86 165 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 BCL2P10415 239 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 ZNF137PP52743 207 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 METRNLQ641Q3 311 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 RNASEH2CQ8TDP1 164 aaKnown RBP4.69□□□□□ -1.66
USF3-202ENST00000478658 PCGF1Q9BSM1 259 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 ZNF275Q9NSD4 429 aaPredicted RBP4.69□□□□□ -1.66
USF3-202ENST00000478658 M0QZQ0 153 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 LPAL2Q16609 132 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 CEACAM16Q2WEN9 425 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 CEACAM21Q3KPI0 293 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 FRRS1LQ9P0K9 344 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 PLXNB2O15031 1838 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 PAX4O43316 350 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 TMEM25Q86YD3 366 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 SAXO1Q8IYX7 474 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 TEX45Q8NA69 505 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 GATD1Q8NB37 220 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 MFRPQ9BY79 579 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 WDR54Q9H977 334 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 DOCK4Q8N1I0 1966 aa4.69□□□□□ -1.66
USF3-202ENST00000478658 C15orf61A6NNL5 157 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 SSTR5P35346 364 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 TMEM160Q9NX00 188 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 IL36RNQ9UBH0 155 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 ECM29Q5VYK3 1845 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 A0A096LPE4 126 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 A0A1W2PPZ6 126 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 J3QT63 122 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 MGST3O14880 152 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 TRIP6Q15654 476 aaKnown RBP4.68□□□□□ -1.66
USF3-202ENST00000478658 CENPWQ5EE01 88 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 TCTN3Q6NUS6 607 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 FAM90A1Q86YD7 464 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 MRPL43Q8N983 215 aaKnown RBP4.68□□□□□ -1.66
USF3-202ENST00000478658 BAALCQ8WXS3 180 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 TNFRSF19Q9NS68 423 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 AJAP1Q9UKB5 411 aaPredicted RBP4.68□□□□□ -1.66
USF3-202ENST00000478658 ABCA4P78363 2273 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 IGKV3D-11A0A0A0MRZ8 115 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 PQLC2LA1A4F0 135 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 PLPP3O14495 311 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 IGKV3-11P04433 115 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 PTGDSP41222 190 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 CLECL1Q8IZS7 167 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 DOK4Q8TEW6 326 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 PAPPAQ13219 1627 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 PARP14Q460N5 1801 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 A0A1W2PPE3 182 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 TCRBV4S1A1TA0A5B7 111 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 PTP4A3O75365 173 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 PITX1P78337 314 aaPredicted RBP4.68□□□□□ -1.66
USF3-202ENST00000478658 CD200R1LQ6Q8B3 271 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 LYZL4Q96KX0 146 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 ZNF576Q9H609 170 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 TRAV13-2A0A0B4J235 113 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 TBX18O95935 607 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 ACYP1P07311 99 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 RNF224P0DH78 156 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 CSF2RBP32927 897 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 ATP5EP56381 51 aaPredicted RBP4.68□□□□□ -1.66
USF3-202ENST00000478658 ZIC4Q8N9L1 334 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 CHCHD1Q96BP2 118 aaKnown RBP4.68□□□□□ -1.66
USF3-202ENST00000478658 CHCHD5Q9BSY4 110 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 JPT1Q9UK76 154 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 ZNF257Q9Y2Q1 563 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 TRBV5-3A0A0A0MS03 114 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 CD28P10747 220 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms