RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 NPATQ14207 1427 aa2.08□□□□□ -2.08
SMNDC1-205ENST00000477763 IGHV3OR15-7A0A075B7D8 119 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 M0QZK8 103 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 FAM228BP0C875 321 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 CTSEP14091 401 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 SNAP25P60880 206 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 PRDX4Q13162 271 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 JOSD1Q15040 202 aaPredicted RBP2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 DEFB115Q30KQ5 88 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 C1orf194Q5T5A4 169 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 LPCAT3Q6P1A2 487 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 OR52L1Q8NGH7 329 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 OR51A2Q8NGJ7 313 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 OR13D1Q8NGV5 346 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 RMND5BQ96G75 393 aaPredicted RBP2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 ANKRD36BP1Q96IX9 119 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 OR52B2Q96RD2 323 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 CGREF1Q99674 301 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 ALX4Q9H161 411 aaPredicted RBP2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 LINC00527Q9UJ94 153 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 UTP11Q9Y3A2 253 aaKnown RBP2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 WASHC3Q9Y3C0 194 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 LINC00588Q9Y4M8 146 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 HSPB11Q9Y547 144 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 TMEM56-RWDD3S4R434 201 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 PRR14LQ5THK1 2151 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 DHX57Q6P158 1386 aaKnown RBP2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 NUP160Q12769 1436 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 NCAPD3P42695 1498 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 ARHGEF11O15085 1522 aa2.07□□□□□ -2.08
SMNDC1-205ENST00000477763 SYNMO15061 1565 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 TRAV8-1A0A0A6YYK1 113 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 PRORSD1PA6NEY8 169 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 SDHAF1A6NFY7 115 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 G3V3Q6 166 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 KPNA4O00629 521 aaPredicted RBP2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 TP53I11O14683 189 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 LTAP01374 205 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 SERPINA7P05543 415 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 OR12D1P0DN82 309 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 ZNF22P17026 224 aaPredicted RBP2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 MAP2K4P45985 399 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 GTF2A1P52655 376 aaPredicted RBP2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 CTBP2P56545 445 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 RUNX1Q01196 453 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 TMEM267Q0VDI3 215 aaPredicted RBP2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 NOXRED1Q6NXP6 359 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 TCF23Q7RTU1 214 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 FAM19A3Q7Z5A8 133 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 SLC35F6Q8N357 371 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 UBL4BQ8N7F7 174 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 ZNF439Q8NDP4 499 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 OR9I1Q8NGQ6 314 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 SKA2Q8WVK7 121 aaPredicted RBP2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 C11orf40Q8WZ69 217 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 GALMQ96C23 342 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 TCEAL4Q96EI5 215 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 PPP1R2P1Q96PQ5 205 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 RSL24D1Q9UHA3 163 aaKnown RBP2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 OR52A1Q9UKL2 312 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 FIS1Q9Y3D6 152 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 ARAP1Q96P48 1450 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 SMARCA2P51531 1590 aa2.06□□□□□ -2.08
SMNDC1-205ENST00000477763 hADV38S2A0JD32 116 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 IGSF23A1L1A6 192 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 H3BSA7 217 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 LECT2O14960 151 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 ARPC5O15511 151 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 SLC25A20O43772 301 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 ZNF73O43830 326 aaPredicted RBP2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 ORC5O43913 435 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 FGF6P10767 208 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 S100GP29377 79 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 FUSP35637 526 aaKnown RBP eCLIP2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 PSMB3P49720 205 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 RHOBP62745 196 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 BRMS1LQ5PSV4 323 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 TMEM78Q5T7P6 136 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 SBSNQ6UWP8 590 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 TOMM20LQ6UXN7 152 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 ATP5L2Q7Z4Y8 100 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 DHFR2Q86XF0 187 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 ZBTB8OSQ8IWT0 167 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 MSRB3Q8IXL7 192 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 ZNF567Q8N184 647 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 OR11H6Q8NGC7 330 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 ZNRF2Q8NHG8 242 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 GNPDA2Q8TDQ7 276 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 C12orf43Q96C57 262 aaKnown RBP2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 KLF6Q99612 283 aaPredicted RBP2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 CISHQ9NSE2 258 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 PKIGQ9Y2B9 76 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 PCYT1BQ9Y5K3 369 aaPredicted RBP2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 DCCP43146 1447 aa2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 WRNQ14191 1432 aaPredicted RBP eCLIP2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 YTHDC2Q9H6S0 1430 aaKnown RBP2.05□□□□□ -2.08
SMNDC1-205ENST00000477763 FAM236DA0A1B0GTK5 79 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 VWA8A3KMH1 1905 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 B4DEV8 164 aa2.04□□□□□ -2.08
SMNDC1-205ENST00000477763 INMT-MINDY4F8WBC2 141 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms