RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-215	ENST00000476664	NR2C2AP	Q86WQ0	139 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	LINC00337	Q8N6G1	96 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	OR1L8	Q8NGR8	309 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	RNF157	Q96PX1	679 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	OR2A7	Q96R45	310 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	CAMK2N2	Q96S95	79 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	SIGMAR1	Q99720	223 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	HOPX	Q9BPY8	73 aa	Predicted RBP	4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	SOST	Q9BQB4	213 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	ZNF717	Q9BY31	904 aa	Predicted RBP	4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	REG4	Q9BYZ8	158 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	OR51I2	Q9H344	312 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	HHLA2	Q9UM44	414 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	SLC22A7	Q9Y694	548 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	MED12	Q93074	2177 aa		4.89	□□□□□ -1.63
LRCH3-215	ENST00000476664	IGHV2-26	A0A0B4J1V2	119 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	IGHV5-51	A0A0C4DH38	117 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	BTNL10	A8MVZ5	291 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	TRIM49D1	C9J1S8	452 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664		K7EPK0	472 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	CYB5R3	P00387	301 aa	Predicted RBP	4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	HBZ	P02008	142 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	OR4A8	P0C604	315 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	CD79A	P11912	226 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	FOLR2	P14207	255 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	CXCL3	P19876	107 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	CDK9	P50750	372 aa	Known RBP	4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	HIST1H3A	P68431	136 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	H3F3A	P84243	136 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	MEF2C	Q06413	473 aa	Predicted RBP	4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	HIGD2B	Q4VC39	106 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	TRMT12	Q53H54	448 aa	Known RBP	4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	CENPW	Q5EE01	88 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	OTP	Q5XKR4	325 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	HIST2H3A	Q71DI3	136 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	C20orf203	Q8NBC4	194 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	OR4M1	Q8NGD0	313 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	JOSD2	Q8TAC2	188 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	DCUN1D1	Q96GG9	259 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	OR2M2	Q96R28	347 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	CCL19	Q99731	98 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	ANAPC13	Q9BS18	74 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	ZNF649	Q9BS31	505 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	TMEM109	Q9BVC6	243 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	KIFC1	Q9BW19	673 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	PCBD2	Q9H0N5	130 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	TMEM216	Q9P0N5	145 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	DOK5	Q9P104	306 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	TIMM22	Q9Y584	194 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664	DNAH1	Q9P2D7	4330 aa		4.88	□□□□□ -1.63
LRCH3-215	ENST00000476664		A0A0G2JMP0	313 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664		A0A0X1KG70	313 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	GOLGA6L4	A6NEF3	574 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	ZNF878	C9JN71	531 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	COPE	O14579	308 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	GYG2	O15488	501 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	TCF21	O43680	179 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	IGLV2-23	P01705	113 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	OR5G3	P0C626	314 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	IL3RA	P26951	378 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	NMU	P48645	174 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	PPP1CA	P62136	330 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	CDK5	Q00535	292 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	ZC2HC1B	Q5TFG8	222 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	SPATA31B1P	Q5VZV4	182 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	C6orf120	Q7Z4R8	191 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	NATD1	Q8N6N6	113 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	OR2M7	Q8NG81	312 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	RHOXF1	Q8NHV9	184 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	FAM57A	Q8TBR7	257 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	TWIST2	Q8WVJ9	160 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	TNFAIP8L1	Q8WVP5	186 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	YIPF5	Q969M3	257 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	SLC35B4	Q969S0	331 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	C1orf147	Q96MC9	270 aa	Predicted RBP	4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	YPEL4	Q96NS1	127 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	LINC01587	Q99440	93 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	CMSS1	Q9BQ75	279 aa	Known RBP	4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	TBL1XR1	Q9BZK7	514 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	DCSTAMP	Q9H295	470 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	HES4	Q9HCC6	221 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	SLC7A10	Q9NS82	523 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	TAS2R7	Q9NYW3	318 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	RBM12B-AS1	Q9P1G2	102 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	SMPX	Q9UHP9	88 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	KLF13	Q9Y2Y9	288 aa	Predicted RBP	4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	ZNF780B	Q9Y6R6	833 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664	MALRD1	Q5VYJ5	2156 aa		4.87	□□□□□ -1.63
LRCH3-215	ENST00000476664		A0A087WUJ7	227 aa		4.86	□□□□□ -1.63
LRCH3-215	ENST00000476664	INS-IGF2	F8WCM5	200 aa		4.86	□□□□□ -1.63
LRCH3-215	ENST00000476664	C15orf65	H3BRN8	121 aa		4.86	□□□□□ -1.63
LRCH3-215	ENST00000476664	ANGPTL7	O43827	346 aa		4.86	□□□□□ -1.63
LRCH3-215	ENST00000476664	COX7A2P2	O60397	106 aa		4.86	□□□□□ -1.63
LRCH3-215	ENST00000476664	ATP5G1	P05496	136 aa		4.86	□□□□□ -1.63
LRCH3-215	ENST00000476664		P0C879	139 aa		4.86	□□□□□ -1.63
LRCH3-215	ENST00000476664	SCGB1C2	P0DMR2	95 aa		4.86	□□□□□ -1.63
LRCH3-215	ENST00000476664	CXCL2	P19875	107 aa		4.86	□□□□□ -1.63
LRCH3-215	ENST00000476664	CXCL5	P42830	114 aa		4.86	□□□□□ -1.63

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