RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CD3GP09693 182 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 C8orf88P0DMB2 117 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 RRASP10301 218 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 CTRB1P17538 263 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 CELP19835 753 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 MAPK3P27361 379 aaPredicted RBP3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 DUTP33316 252 aaKnown RBP3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 ARL3P36405 182 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 MAP2K4P45985 399 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 SERPINB10P48595 397 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 TMEM50BP56557 158 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 SCAND1P57086 179 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 NANOS2P60321 138 aaKnown RBP3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 CDK10Q15131 360 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 ODF3L2Q3SX64 289 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 FAM106AQ4KMX7 169 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 IGSF11Q5DX21 431 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 TTC23Q5W5X9 447 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 GLT8D1Q68CQ7 371 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 CTRB2Q6GPI1 263 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 OR4A47Q6IF82 309 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 CLEC19AQ6UXS0 136 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 UNQ9165/PRO28630Q6UXU0 137 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 SLC25A42Q86VD7 318 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 MMD2Q8IY49 270 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 OR2C3Q8N628 320 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 STPG3Q8N7X2 389 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 OR4A4PQ8NGN8 299 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 OSR1Q8TAX0 266 aaPredicted RBP3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 PHYHIPQ92561 330 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 MARC2Q969Z3 335 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 ARHGAP5-AS1Q96IT6 56 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 ADTRPQ96IZ2 230 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 CMSS1Q9BQ75 279 aaKnown RBP3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 CABLES2Q9BTV7 478 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 C11orf68Q9H3H3 251 aaKnown RBP3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 UBQLN2Q9UHD9 624 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 FBXL7Q9UJT9 491 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 HSF4Q9ULV5 492 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 S4R3C0 116 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 MYCBP2O75592 4640 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 TRBV6-7A0A0A0MS04 114 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 MFSD2BA6NFX1 497 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 E7EUB6 86 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 J3KRW8 73 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 TSPAN4O14817 238 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 FABP7O15540 132 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 CIB2O75838 187 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 DIRAS3O95661 229 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 IL6RP08887 468 aaPredicted RBP3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 CD37P11049 281 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 AREGP15514 252 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 RPL35AP18077 110 aaKnown RBP3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 GALP22466 123 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 FCGR2BP31994 310 aaPredicted RBP3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 RASSF2P50749 326 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 ELLP55199 621 aaPredicted RBP3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 ST3GAL4Q11206 333 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 MED21Q13503 144 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 TPBGQ13641 420 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 RBMS2Q15434 407 aaKnown RBP3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 ZNF124Q15973 351 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 KLK9Q2XQG4 91 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 ZNF585BQ52M93 769 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 ACSM3Q53FZ2 586 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 PLAC9Q5JTB6 97 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 RBM48Q5RL73 367 aaKnown RBP3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 ZFP1Q6P2D0 407 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 RBPMS2Q6ZRY4 209 aaKnown RBP3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 SLC38A6Q8IZM9 456 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 SETD9Q8NE22 299 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 OR6M1Q8NGM8 313 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 OR10J5Q8NHC4 309 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 C2CD4CQ8TF44 421 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 EEF1AKMT3Q96AZ1 226 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 TMEM80Q96HE8 168 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 SPAG8Q99932 426 aaPredicted RBP3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 URM1Q9BTM9 101 aaKnown RBP3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 C9orf16Q9BUW7 83 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 PECRQ9BY49 303 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 KRTAP4-5Q9BYR2 181 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 MFFQ9GZY8 342 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 C5orf66Q9H5L9 145 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 MAP6D1Q9H9H5 199 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 FBXL17Q9UF56 701 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 KLK9Q9UKQ9 250 aa3.77□□□□□ -1.81
SNRNP40-204ENST00000474025 IGLV11-55A0A075B6I3 123 aa3.76□□□□□ -1.81
SNRNP40-204ENST00000474025 TRBV7-1A0A0A6YYK4 115 aa3.76□□□□□ -1.81
SNRNP40-204ENST00000474025 IGHV3-35A0A0C4DH35 117 aa3.76□□□□□ -1.81
SNRNP40-204ENST00000474025 DPPA5A6NC42 116 aa3.76□□□□□ -1.81
SNRNP40-204ENST00000474025 EFCAB10A6NFE3 127 aa3.76□□□□□ -1.81
SNRNP40-204ENST00000474025 ZNF561-AS1K7EIQ3 104 aa3.76□□□□□ -1.81
SNRNP40-204ENST00000474025 SLC17A2O00624 439 aa3.76□□□□□ -1.81
SNRNP40-204ENST00000474025 MYL12BO14950 172 aa3.76□□□□□ -1.81
SNRNP40-204ENST00000474025 FCGR3BO75015 233 aa3.76□□□□□ -1.81
SNRNP40-204ENST00000474025 IFNA4P05014 189 aa3.76□□□□□ -1.81
SNRNP40-204ENST00000474025 CLEC3BP05452 202 aa3.76□□□□□ -1.81
SNRNP40-204ENST00000474025 CRYGCP07315 174 aa3.76□□□□□ -1.81
SNRNP40-204ENST00000474025 FCGR3AP08637 254 aa3.76□□□□□ -1.81
SNRNP40-204ENST00000474025 ZNF735P0CB33 412 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms