RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 DOCK11Q5JSL3 2073 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 USF3Q68DE3 2245 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 BORCS7-ASMTA0A0B4J1R7 106 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 TRAV3A0A0B4J244 114 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 SRRM4A7MD48 611 aaKnown RBP7.58□□□□□ -1.2
VPS52-216ENST00000471309 RNASEK-C17orf49H0YIS7 233 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 H3BP45 60 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 KBTBD11O94819 623 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 TOX4O94842 621 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 IFNA17P01571 189 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 LGALS7P47929 136 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 NHLH2Q02577 135 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 KLRD1Q13241 179 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 HABP2Q14520 560 aaPredicted RBP7.58□□□□□ -1.2
VPS52-216ENST00000471309 ZNF266Q14584 549 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 CLEC12BQ2HXU8 276 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 MINOS1Q5TGZ0 78 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 TMEM14EPQ6UXP3 125 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 OR8H3Q8N146 312 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 UBAC2Q8NBM4 344 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 OR5C1Q8NGR4 320 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 TMEM167AQ8TBQ9 72 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 BSCL2Q96G97 398 aaPredicted RBP7.58□□□□□ -1.2
VPS52-216ENST00000471309 PSMG3-AS1Q96PY0 264 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 TBX15Q96SF7 602 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 SMIM3Q9BZL3 60 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 ARV1Q9H2C2 271 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 DPM3Q9P2X0 92 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 ITGB1BP2Q9UKP3 347 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 NUP50Q9UKX7 468 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 TBL2Q9Y4P3 447 aaKnown RBP7.58□□□□□ -1.2
VPS52-216ENST00000471309 INSIG2Q9Y5U4 225 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 MINOS1-NBL1R4GNA1 71 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 MALRD1Q5VYJ5 2156 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 UNC79Q9P2D8 2635 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 FLNCQ14315 2725 aa7.58□□□□□ -1.2
VPS52-216ENST00000471309 CEBPZOSA8MTT3 80 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 DFFBO76075 338 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 CST7O76096 145 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 IGLV2-23P01705 113 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 USF1P22415 310 aaPredicted RBP7.57□□□□□ -1.2
VPS52-216ENST00000471309 DYNLT3P51808 116 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 UBE2E1P51965 193 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 KRTAP10-9P60411 292 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 RAB14P61106 215 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 HSPE1P61604 102 aaKnown RBP7.57□□□□□ -1.2
VPS52-216ENST00000471309 HBG1P69891 147 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 HBG2P69892 147 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 TMEM267Q0VDI3 215 aaPredicted RBP7.57□□□□□ -1.2
VPS52-216ENST00000471309 VMA21Q3ZAQ7 101 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 LDLRAD2Q5SZI1 272 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 EIF5AL1Q6IS14 154 aaKnown RBP7.57□□□□□ -1.2
VPS52-216ENST00000471309 CCDC144NLQ6NUI1 221 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 CLEC9AQ6UXN8 241 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 OR1S2Q8NGQ3 325 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 OR5B3Q8NH48 314 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 CFHR4Q92496 578 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 C1orf159Q96HA4 380 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 OR4C12Q96R67 309 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 CLCC1Q96S66 551 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 TSNAXQ99598 290 aaKnown RBP7.57□□□□□ -1.2
VPS52-216ENST00000471309 ATP5SQ99766 215 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 RNF5Q99942 180 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 WFDC1Q9HC57 220 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 FKBP11Q9NYL4 201 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 TCF19Q9Y242 345 aa7.57□□□□□ -1.2
VPS52-216ENST00000471309 STRAPQ9Y3F4 350 aaKnown RBP7.57□□□□□ -1.2
VPS52-216ENST00000471309 COL12A1Q99715 3063 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 VENTXO95231 258 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 NMBP08949 121 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 METTL15P1P0C7V9 234 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 CD1BP29016 333 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 VDAC2P45880 294 aaPredicted RBP7.56□□□□□ -1.2
VPS52-216ENST00000471309 HOXA1P49639 335 aaPredicted RBP7.56□□□□□ -1.2
VPS52-216ENST00000471309 RPS16P62249 146 aaKnown RBP7.56□□□□□ -1.2
VPS52-216ENST00000471309 RPL8P62917 257 aaKnown RBP7.56□□□□□ -1.2
VPS52-216ENST00000471309 PRCDQ00LT1 54 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 PAX8Q06710 450 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 DEFB113Q30KQ7 82 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 SPANXN5Q5MJ07 72 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 LHFPL4Q7Z7J7 247 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 MOB3BQ86TA1 216 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 HAPLN4Q86UW8 402 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 LRRC20Q8TCA0 184 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 MBD6Q96DN6 1003 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 GINS3Q9BRX5 216 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 SLC25A32Q9H2D1 315 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 HIPK2Q9H2X6 1198 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 LPAR2Q9HBW0 351 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 OR51B2Q9Y5P1 312 aa7.56□□□□□ -1.2
VPS52-216ENST00000471309 A0A096LNT2 108 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 IGHV3-72A0A0B4J1Y9 119 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 PMS2P5A8MQ11 134 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 INS-IGF2F8WCM5 200 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 TIMM23O14925 209 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 ATP6V1G1O75348 118 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 MSMBP08118 114 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 SEC11BP0C7V7 166 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 RPP30P78346 268 aaKnown RBP7.55□□□□□ -1.2
VPS52-216ENST00000471309 SLC38A11Q08AI6 406 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms