RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 ZNF329Q86UD4 541 aa15.58■□□□□ 0.08
COL9A3-204ENST00000463487 NDUFA11Q86Y39 141 aa15.58■□□□□ 0.08
COL9A3-204ENST00000463487 VKORC1L1Q8N0U8 176 aa15.58■□□□□ 0.08
COL9A3-204ENST00000463487 TMEM167AQ8TBQ9 72 aa15.58■□□□□ 0.08
COL9A3-204ENST00000463487 TMEM68Q96MH6 324 aa15.58■□□□□ 0.08
COL9A3-204ENST00000463487 PHB2Q99623 299 aa15.58■□□□□ 0.08
COL9A3-204ENST00000463487 C3orf85A0A1B0GTC6 90 aa15.57■□□□□ 0.08
COL9A3-204ENST00000463487 TCRBV4S1A1TA0A5B7 111 aa15.57■□□□□ 0.08
COL9A3-204ENST00000463487 MARCH11A6NNE9 402 aa15.57■□□□□ 0.08
COL9A3-204ENST00000463487 PJVKQ0ZLH3 352 aa15.57■□□□□ 0.08
COL9A3-204ENST00000463487 FOXE3Q13461 319 aa15.57■□□□□ 0.08
COL9A3-204ENST00000463487 ZNF846Q147U1 533 aa15.57■□□□□ 0.08
COL9A3-204ENST00000463487 AKIRIN2Q53H80 203 aa15.57■□□□□ 0.08
COL9A3-204ENST00000463487 CXorf66Q5JRM2 361 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-204ENST00000463487 OR4A47Q6IF82 309 aa15.57■□□□□ 0.08
COL9A3-204ENST00000463487 TMEM65Q6PI78 240 aa15.57■□□□□ 0.08
COL9A3-204ENST00000463487 PUSL1Q8N0Z8 303 aaKnown RBP15.57■□□□□ 0.08
COL9A3-204ENST00000463487 MRGPRFQ96AM1 343 aa15.57■□□□□ 0.08
COL9A3-204ENST00000463487 ZNF430Q9H8G1 570 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-204ENST00000463487 GPR132Q9UNW8 380 aa15.57■□□□□ 0.08
COL9A3-204ENST00000463487 TSSC4Q9Y5U2 329 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-204ENST00000463487 WSB1Q9Y6I7 421 aa15.57■□□□□ 0.08
COL9A3-204ENST00000463487 IGHG4P01861 327 aa15.56■□□□□ 0.08
COL9A3-204ENST00000463487 ELANEP08246 267 aa15.56■□□□□ 0.08
COL9A3-204ENST00000463487 FGF2P09038 288 aa15.56■□□□□ 0.08
COL9A3-204ENST00000463487 RPL8P62917 257 aaKnown RBP15.56■□□□□ 0.08
COL9A3-204ENST00000463487 NDPQ00604 133 aa15.56■□□□□ 0.08
COL9A3-204ENST00000463487 RBMS2Q15434 407 aaKnown RBP15.56■□□□□ 0.08
COL9A3-204ENST00000463487 UNQ5815/PRO19632Q6UWF5 114 aa15.56■□□□□ 0.08
COL9A3-204ENST00000463487 SGPP2Q8IWX5 399 aa15.56■□□□□ 0.08
COL9A3-204ENST00000463487 CADM3Q8N126 398 aa15.56■□□□□ 0.08
COL9A3-204ENST00000463487 TSC22D3Q99576 134 aa15.56■□□□□ 0.08
COL9A3-204ENST00000463487 SDHCQ99643 169 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-204ENST00000463487 SPIN2AQ99865 258 aa15.56■□□□□ 0.08
COL9A3-204ENST00000463487 CITED2Q99967 270 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-204ENST00000463487 SPIN2BQ9BPZ2 258 aa15.56■□□□□ 0.08
COL9A3-204ENST00000463487 C5orf66Q9H5L9 145 aa15.56■□□□□ 0.08
COL9A3-204ENST00000463487 TMEM140Q9NV12 185 aa15.56■□□□□ 0.08
COL9A3-204ENST00000463487 FOXA2Q9Y261 457 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-204ENST00000463487 KCNIP3Q9Y2W7 256 aa15.56■□□□□ 0.08
COL9A3-204ENST00000463487 TET2Q6N021 2002 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-204ENST00000463487 PIGBOS1A0A0B4J2F0 54 aa15.55■□□□□ 0.08
COL9A3-204ENST00000463487 SNAPC5O75971 98 aa15.55■□□□□ 0.08
COL9A3-204ENST00000463487 KRASP01116 189 aa15.55■□□□□ 0.08
COL9A3-204ENST00000463487 CD83Q01151 205 aa15.55■□□□□ 0.08
COL9A3-204ENST00000463487 TRIM16LQ309B1 348 aa15.55■□□□□ 0.08
COL9A3-204ENST00000463487 ZNF585BQ52M93 769 aa15.55■□□□□ 0.08
COL9A3-204ENST00000463487 OR5M8Q8NGP6 311 aa15.55■□□□□ 0.08
COL9A3-204ENST00000463487 RTBDNQ9BSG5 229 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-204ENST00000463487 NAA60Q9H7X0 242 aa15.55■□□□□ 0.08
COL9A3-204ENST00000463487 ZFP57Q9NU63 452 aa15.55■□□□□ 0.08
COL9A3-204ENST00000463487 NUBP2Q9Y5Y2 271 aa15.55■□□□□ 0.08
COL9A3-204ENST00000463487 LINC00854A0A1B0GVQ3 168 aa15.54■□□□□ 0.08
COL9A3-204ENST00000463487 A0A1W2PN81 502 aa15.54■□□□□ 0.08
COL9A3-204ENST00000463487 G3V318 75 aa15.54■□□□□ 0.08
COL9A3-204ENST00000463487 ARPC1BO15143 372 aaKnown RBP15.54■□□□□ 0.08
COL9A3-204ENST00000463487 ANXA3P12429 323 aa15.54■□□□□ 0.08
COL9A3-204ENST00000463487 CHRNA7P36544 502 aa15.54■□□□□ 0.08
COL9A3-204ENST00000463487 DHODHQ02127 395 aa15.54■□□□□ 0.08
COL9A3-204ENST00000463487 CFHR3Q02985 330 aa15.54■□□□□ 0.08
COL9A3-204ENST00000463487 LFNGQ8NES3 379 aa15.54■□□□□ 0.08
COL9A3-204ENST00000463487 SRSF12Q8WXF0 261 aaKnown RBP15.54■□□□□ 0.08
COL9A3-204ENST00000463487 FAM103A1Q9BTL3 118 aaKnown RBP15.54■□□□□ 0.08
COL9A3-204ENST00000463487 FBXO7Q9Y3I1 522 aa15.54■□□□□ 0.08
COL9A3-204ENST00000463487 CRYM-AS1A6NIL9 109 aa15.53■□□□□ 0.08
COL9A3-204ENST00000463487 HLA-GP17693 338 aa15.53■□□□□ 0.08
COL9A3-204ENST00000463487 PPIFP30405 207 aaKnown RBP15.53■□□□□ 0.08
COL9A3-204ENST00000463487 G6PCP35575 357 aa15.53■□□□□ 0.08
COL9A3-204ENST00000463487 RPL27AP46776 148 aaKnown RBP15.53■□□□□ 0.08
COL9A3-204ENST00000463487 AKR1C2P52895 323 aa15.53■□□□□ 0.08
COL9A3-204ENST00000463487 C10orf99Q6UWK7 81 aa15.53■□□□□ 0.08
COL9A3-204ENST00000463487 H2BFWTQ7Z2G1 175 aa15.53■□□□□ 0.08
COL9A3-204ENST00000463487 MINDY2Q8NBR6 621 aa15.53■□□□□ 0.08
COL9A3-204ENST00000463487 RNASE11Q8TAA1 199 aaKnown RBP15.53■□□□□ 0.08
COL9A3-204ENST00000463487 TP53RKQ96S44 253 aa15.53■□□□□ 0.08
COL9A3-204ENST00000463487 COMMD5Q9GZQ3 224 aa15.53■□□□□ 0.08
COL9A3-204ENST00000463487 FKBP11Q9NYL4 201 aa15.53■□□□□ 0.08
COL9A3-204ENST00000463487 VSIG4Q9Y279 399 aa15.53■□□□□ 0.08
COL9A3-204ENST00000463487 TENM1Q9UKZ4 2725 aa15.52■□□□□ 0.08
COL9A3-204ENST00000463487 MSGN1A6NI15 193 aa15.52■□□□□ 0.08
COL9A3-204ENST00000463487 UPK2O00526 184 aa15.52■□□□□ 0.08
COL9A3-204ENST00000463487 PF4V1P10720 104 aa15.52■□□□□ 0.08
COL9A3-204ENST00000463487 EGR2P11161 476 aaPredicted RBP15.52■□□□□ 0.08
COL9A3-204ENST00000463487 AKR1C4P17516 323 aa15.52■□□□□ 0.08
COL9A3-204ENST00000463487 UCP1P25874 307 aa15.52■□□□□ 0.08
COL9A3-204ENST00000463487 SLC6A1P30531 599 aa15.52■□□□□ 0.08
COL9A3-204ENST00000463487 NSUN5P1Q3KNT7 163 aa15.52■□□□□ 0.08
COL9A3-204ENST00000463487 TMED4Q7Z7H5 227 aa15.52■□□□□ 0.08
COL9A3-204ENST00000463487 SLC25A42Q86VD7 318 aa15.52■□□□□ 0.08
COL9A3-204ENST00000463487 OR4F17Q8NGA8 305 aa15.52■□□□□ 0.08
COL9A3-204ENST00000463487 OR4F4Q96R69 305 aa15.52■□□□□ 0.08
COL9A3-204ENST00000463487 NUDT19A8MXV4 375 aa15.51■□□□□ 0.07
COL9A3-204ENST00000463487 H3BUA1 57 aa15.51■□□□□ 0.07
COL9A3-204ENST00000463487 PLXNB1O43157 2135 aa15.51■□□□□ 0.07
COL9A3-204ENST00000463487 OR5AC1P0C628 307 aa15.51■□□□□ 0.07
COL9A3-204ENST00000463487 PSMB8P28062 276 aa15.51■□□□□ 0.07
COL9A3-204ENST00000463487 MRGPRG-AS1Q2M3A8 158 aa15.51■□□□□ 0.07
COL9A3-204ENST00000463487 C19orf54Q5BKX5 351 aa15.51■□□□□ 0.07
COL9A3-204ENST00000463487 TCTEX1D4Q5JR98 221 aa15.51■□□□□ 0.07
COL9A3-204ENST00000463487 THOC7Q6I9Y2 204 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms