RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 OR2A7Q96R45 310 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 PRSS22Q9GZN4 317 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 RANBP3Q9H6Z4 567 aaPredicted RBP8.08□□□□□ -1.12
UPF2-204ENST00000460569 GPN1Q9HCN4 374 aaPredicted RBP8.08□□□□□ -1.12
UPF2-204ENST00000460569 BET1LQ9NYM9 111 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 TMEM56-RWDD3S4R434 201 aa8.08□□□□□ -1.12
UPF2-204ENST00000460569 PIGBOS1A0A0B4J2F0 54 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 FCN1O00602 326 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 PRAF2O60831 178 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 CA2P00918 260 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 IGKV1-5P01602 117 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 HLA-DRB1P01911 266 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 IL5P05113 134 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 CRYGBP07316 175 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 PJVKQ0ZLH3 352 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 MMD2Q8IY49 270 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 TMEM167AQ8TBQ9 72 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 ZNF431Q8TF32 576 aaPredicted RBP8.07□□□□□ -1.12
UPF2-204ENST00000460569 ABHD5Q8WTS1 349 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 TAF15Q92804 592 aaKnown RBP eCLIP8.07□□□□□ -1.12
UPF2-204ENST00000460569 PHB2Q99623 299 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 HSPB9Q9BQS6 159 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 ZNF430Q9H8G1 570 aaPredicted RBP8.07□□□□□ -1.12
UPF2-204ENST00000460569 ZNF702PQ9H963 129 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 NF1P21359 2839 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 C2CD3Q4AC94 2353 aa8.07□□□□□ -1.12
UPF2-204ENST00000460569 ZFHX3Q15911 3703 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 TRAV3A0A0B4J244 114 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 A0A0B4J2A0 478 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 A0A0G2JRQ6 117 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 DUXBA0A1W2PPF3 345 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 UPK2O00526 184 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 RBMXL2O75526 392 aaKnown RBP8.06□□□□□ -1.12
UPF2-204ENST00000460569 SNAPC5O75971 98 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 ACTL6BO94805 426 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 CNIH1O95406 144 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 OR9G9P0C7N8 305 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 OR2B8PP59922 312 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 RPL8P62917 257 aaKnown RBP8.06□□□□□ -1.12
UPF2-204ENST00000460569 RELBQ01201 579 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 OXA1LQ15070 435 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 TNXAQ16473 311 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 PRSS8Q16651 343 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 TATDN3Q17R31 274 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 IZUMO4Q1ZYL8 232 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 TMEM95Q3KNT9 176 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 Q6ZS46 218 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 Q6ZSV7 163 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 LYZL2Q7Z4W2 148 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 SLC35E3Q7Z769 313 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.06□□□□□ -1.12
UPF2-204ENST00000460569 MINDY2Q8NBR6 621 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 UXS1Q8NBZ7 420 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 OR4A5Q8NH83 315 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 CHPT1Q8WUD6 406 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 MITD1Q8WV92 249 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 PARP11Q9NR21 331 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 SHPKQ9UHJ6 478 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 NSG2Q9Y328 171 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 MMP24Q9Y5R2 645 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 PLXNB1O43157 2135 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 CUBNO60494 3623 aa8.06□□□□□ -1.12
UPF2-204ENST00000460569 TET2Q6N021 2002 aaPredicted RBP8.05□□□□□ -1.12
UPF2-204ENST00000460569 IGHV7-81A0A0B4J1V7 117 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 KCNAB3O43448 404 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 ADAP1O75689 374 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 HOXB5P09067 269 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 P0C879 139 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 VDAC1P21796 283 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 VDAC2P45880 294 aaPredicted RBP8.05□□□□□ -1.12
UPF2-204ENST00000460569 CX3CL1P78423 397 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 NDPQ00604 133 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 MRGPRG-AS1Q2M3A8 158 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 C10orf55Q5SWW7 151 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 FAM219AQ8IW50 185 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 C12orf45Q8N5I9 185 aaPredicted RBP8.05□□□□□ -1.12
UPF2-204ENST00000460569 LRTM2Q8N967 370 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 OR4A16Q8NH70 328 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 OR2T6Q8NHC8 308 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 GRPEL2Q8TAA5 225 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 ARPC1AQ92747 370 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 LSM10Q969L4 123 aaKnown RBP8.05□□□□□ -1.12
UPF2-204ENST00000460569 GPR146Q96CH1 333 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 OR51J1Q9H342 316 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 PRNDQ9UKY0 176 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 ALG5Q9Y673 324 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 TNCP24821 2201 aa8.05□□□□□ -1.12
UPF2-204ENST00000460569 A0A0B4J293 547 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 C15orf61A6NNL5 157 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 SNRPGP15A8MWD9 76 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 CCSO14618 274 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 ATP6V0E1O15342 81 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 TSPAN9O75954 239 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 NDUFA7O95182 113 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 IFNA21P01568 189 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 IGHG2P01859 326 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 OPN1MWP04001 364 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 IL6RP08887 468 aaPredicted RBP8.04□□□□□ -1.12
UPF2-204ENST00000460569 SULT1A3P0DMM9 295 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 SULT1A4P0DMN0 295 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms