RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 AQP7O14520 342 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 NDUFB8O95169 186 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 REG1AP05451 166 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 CYB561P49447 251 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 OR1C1Q15619 314 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 SLC35E4Q6ICL7 350 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 BORCS7Q96B45 105 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 TUBG2Q9NRH3 451 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 BOKQ9UMX3 212 aaPredicted RBP11.42□□□□□ -0.58
PTPRE-204ENST00000455661 PPIAL4AQ9Y536 164 aa11.42□□□□□ -0.58
PTPRE-204ENST00000455661 PINLYPA6NC86 204 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 DPRXA6NFQ7 191 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 LINC00473A8K010 186 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 MT-CO3P00414 261 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 OR9G9P0C7N8 305 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 FRMD6-AS1P0C7T7 363 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 PRRX1P54821 245 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 KLF3P57682 345 aaPredicted RBP11.41□□□□□ -0.58
PTPRE-204ENST00000455661 CX3CL1P78423 397 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 GAL3ST2Q9H3Q3 398 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 PSPNO60542 156 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 ZNF324O75467 553 aaPredicted RBP11.41□□□□□ -0.58
PTPRE-204ENST00000455661 GNG4P50150 75 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 CLDN18P56856 261 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 TMPRSS3P57727 454 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 PRAMEF5Q5TYX0 476 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 PRAMEF6Q5VXH4 476 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 FAM53AQ6NSI3 398 aaPredicted RBP11.41□□□□□ -0.58
PTPRE-204ENST00000455661 C19orf35Q6ZS72 473 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 NPVFQ9HCQ7 196 aa11.41□□□□□ -0.58
PTPRE-204ENST00000455661 KMT2EQ8IZD2 1858 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 HELTA6NFD8 242 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 FAM90A9PA6NNJ1 464 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 SPINK4O60575 86 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 WISP2O76076 250 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 AREGP15514 252 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 OTX2P32243 289 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 CEBPDP49716 269 aaPredicted RBP11.4□□□□□ -0.58
PTPRE-204ENST00000455661 ZNF83P51522 516 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 PLGLB1Q02325 96 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 AESQ08117 197 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 KIAA1644Q3SXP7 199 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 TMEM136Q6ZRR5 245 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 GCNT2Q8N0V5 402 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 MRGPRDQ8TDS7 321 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 SSMEM1Q8WWF3 244 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 NANOS1Q8WY41 292 aaKnown RBP11.4□□□□□ -0.58
PTPRE-204ENST00000455661 BET1LQ9NYM9 111 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 R4GN57 208 aa11.4□□□□□ -0.58
PTPRE-204ENST00000455661 NKX6-3A6NJ46 265 aa11.4□□□□□ -0.59
PTPRE-204ENST00000455661 CCL25O15444 150 aa11.4□□□□□ -0.59
PTPRE-204ENST00000455661 GRPP07492 148 aa11.4□□□□□ -0.59
PTPRE-204ENST00000455661 OR10J4P0C629 311 aa11.4□□□□□ -0.59
PTPRE-204ENST00000455661 C3orf79P0CE67 100 aa11.4□□□□□ -0.59
PTPRE-204ENST00000455661 GABRA2P47869 451 aa11.4□□□□□ -0.59
PTPRE-204ENST00000455661 RAB31Q13636 194 aa11.4□□□□□ -0.59
PTPRE-204ENST00000455661 EFNB3Q15768 340 aa11.4□□□□□ -0.59
PTPRE-204ENST00000455661 C22orf15Q8WYQ4 148 aa11.4□□□□□ -0.59
PTPRE-204ENST00000455661 SLC35D1Q9NTN3 355 aa11.4□□□□□ -0.59
PTPRE-204ENST00000455661 PSG11Q9UQ72 335 aa11.4□□□□□ -0.59
PTPRE-204ENST00000455661 IGHV3-64DA0A0J9YX35 117 aa11.39□□□□□ -0.59
PTPRE-204ENST00000455661 HLA-DQA1P01909 254 aa11.39□□□□□ -0.59
PTPRE-204ENST00000455661 AMY1AP04745 511 aa11.39□□□□□ -0.59
PTPRE-204ENST00000455661 CCL4P13236 92 aa11.39□□□□□ -0.59
PTPRE-204ENST00000455661 SRIP30626 198 aa11.39□□□□□ -0.59
PTPRE-204ENST00000455661 AARDQ4LEZ3 155 aa11.39□□□□□ -0.59
PTPRE-204ENST00000455661 SAPCD1Q5SSQ6 148 aa11.39□□□□□ -0.59
PTPRE-204ENST00000455661 ZNF738Q8NE65 137 aa11.39□□□□□ -0.59
PTPRE-204ENST00000455661 OR4P4Q8NGL7 312 aa11.39□□□□□ -0.59
PTPRE-204ENST00000455661 OR52E5Q8NH55 327 aa11.39□□□□□ -0.59
PTPRE-204ENST00000455661 IFI44Q8TCB0 444 aa11.39□□□□□ -0.59
PTPRE-204ENST00000455661 SAP25Q8TEE9 199 aa11.39□□□□□ -0.59
PTPRE-204ENST00000455661 SEPSECSQ9HD40 501 aaKnown RBP11.39□□□□□ -0.59
PTPRE-204ENST00000455661 FREM1Q5H8C1 2179 aa11.39□□□□□ -0.59
PTPRE-204ENST00000455661 BRWD1Q9NSI6 2320 aa11.39□□□□□ -0.59
PTPRE-204ENST00000455661 TRAV34A0A0B4J273 112 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 FCGR3BO75015 233 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 LINC00205P59089 165 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 ERVK-16P61578 105 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 Q0VFX4 171 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 UBE2V1Q13404 147 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 COTL1Q14019 142 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 PMCHL1Q16048 86 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 TBC1D28Q2M2D7 210 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 TIGITQ495A1 244 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 CENPWQ5EE01 88 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 STUMQ69YW2 141 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 TEPPQ6URK8 271 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 RCHY1Q96PM5 261 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 PHF7Q9BWX1 381 aaPredicted RBP11.38□□□□□ -0.59
PTPRE-204ENST00000455661 WNT10AQ9GZT5 417 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 OSTCQ9NRP0 149 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 B4GALT7Q9UBV7 327 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 MRPS16Q9Y3D3 137 aaKnown RBP11.38□□□□□ -0.59
PTPRE-204ENST00000455661 IGHV3-43A0A0B4J1X8 118 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 IGHV3-43DP0DP04 118 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 VDAC2P45880 294 aaPredicted RBP11.38□□□□□ -0.59
PTPRE-204ENST00000455661 RNASE8Q8TDE3 154 aaKnown RBP11.38□□□□□ -0.59
PTPRE-204ENST00000455661 GP6Q9HCN6 339 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 IL19Q9UHD0 177 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms