RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-206	ENST00000423161	IFNA6	P05013	189 aa		13.99	□□□□□ -0.17
SREBF1-206	ENST00000423161	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.99	□□□□□ -0.17
SREBF1-206	ENST00000423161	CD300E	Q496F6	205 aa	Predicted RBP	13.99	□□□□□ -0.17
SREBF1-206	ENST00000423161	C19orf35	Q6ZS72	473 aa		13.99	□□□□□ -0.17
SREBF1-206	ENST00000423161	PUSL1	Q8N0Z8	303 aa	Known RBP	13.99	□□□□□ -0.17
SREBF1-206	ENST00000423161	MFSD4A	Q8N468	514 aa		13.99	□□□□□ -0.17
SREBF1-206	ENST00000423161	FYTTD1	Q96QD9	318 aa	Known RBP	13.99	□□□□□ -0.17
SREBF1-206	ENST00000423161	RYR2	Q92736	4967 aa		13.98	□□□□□ -0.17
SREBF1-206	ENST00000423161	NPIPB5	A8MRT5	1133 aa		13.98	□□□□□ -0.17
SREBF1-206	ENST00000423161	IL6R	P08887	468 aa	Predicted RBP	13.98	□□□□□ -0.17
SREBF1-206	ENST00000423161	MAS1L	P35410	378 aa		13.98	□□□□□ -0.17
SREBF1-206	ENST00000423161	BRWD1-AS2	P59051	145 aa		13.98	□□□□□ -0.17
SREBF1-206	ENST00000423161	ARPC4	P59998	168 aa		13.98	□□□□□ -0.17
SREBF1-206	ENST00000423161	ZNF66	Q6ZN08	573 aa		13.98	□□□□□ -0.17
SREBF1-206	ENST00000423161	LAX1	Q8IWV1	398 aa		13.98	□□□□□ -0.17
SREBF1-206	ENST00000423161	GPHA2	Q96T91	129 aa		13.98	□□□□□ -0.17
SREBF1-206	ENST00000423161	NEURL2	Q9BR09	285 aa		13.98	□□□□□ -0.17
SREBF1-206	ENST00000423161	SLC2A8	Q9NY64	477 aa		13.98	□□□□□ -0.17
SREBF1-206	ENST00000423161	FBXL7	Q9UJT9	491 aa		13.98	□□□□□ -0.17
SREBF1-206	ENST00000423161	CSMD3	Q7Z407	3707 aa		13.98	□□□□□ -0.17
SREBF1-206	ENST00000423161		E7EUB6	86 aa		13.97	□□□□□ -0.17
SREBF1-206	ENST00000423161	GGCT	O75223	188 aa	Known RBP	13.97	□□□□□ -0.17
SREBF1-206	ENST00000423161	TPPP	O94811	219 aa		13.97	□□□□□ -0.17
SREBF1-206	ENST00000423161	HLA-A	P01891	365 aa	Known RBP	13.97	□□□□□ -0.17
SREBF1-206	ENST00000423161	ZNF735	P0CB33	412 aa		13.97	□□□□□ -0.17
SREBF1-206	ENST00000423161	SDC2	P34741	201 aa		13.97	□□□□□ -0.17
SREBF1-206	ENST00000423161	MXD1	Q05195	221 aa		13.97	□□□□□ -0.17
SREBF1-206	ENST00000423161	SSX9	Q7RTT3	188 aa		13.97	□□□□□ -0.17
SREBF1-206	ENST00000423161	BEST4	Q8NFU0	473 aa		13.97	□□□□□ -0.17
SREBF1-206	ENST00000423161	SECTM1	Q8WVN6	248 aa		13.97	□□□□□ -0.17
SREBF1-206	ENST00000423161	SLC2A9	Q9NRM0	540 aa		13.97	□□□□□ -0.17
SREBF1-206	ENST00000423161	DMRT1	Q9Y5R6	373 aa		13.97	□□□□□ -0.17
SREBF1-206	ENST00000423161	CEPT1	Q9Y6K0	416 aa		13.97	□□□□□ -0.17
SREBF1-206	ENST00000423161		A0A1B0GW64	132 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161	C2orf70	A6NJV1	201 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161	ZNF785	A8K8V0	405 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161	OR2C1	O95371	312 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161	HRAS	P01112	189 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161	CD7	P09564	240 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161	CLEC2L	P0C7M8	214 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161	AREG	P15514	252 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161	EDN2	P20800	178 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161	KIR2DS2	P43631	304 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161	DEFB114	Q30KQ6	69 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161	GVQW1	Q8N7I0	195 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161	OR5H6	Q8NGV6	325 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161	SLC25A38	Q96DW6	304 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161	RETN	Q9HD89	108 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161	CCL28	Q9NRJ3	127 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161		S4R3C0	116 aa		13.96	□□□□□ -0.17
SREBF1-206	ENST00000423161	TRAV18	A0A075B6X5	111 aa		13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161	LGALS9	O00182	355 aa		13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161	TNFSF12	O43508	249 aa		13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161	NDUFB8	O95169	186 aa		13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161	IGHV3-23	P01764	117 aa		13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161	PTHLH	P12272	177 aa		13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161	FOLR2	P14207	255 aa		13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161	FCGR2C	P31995	323 aa		13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161	SCAND1	P57086	179 aa		13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161	RPL8	P62917	257 aa	Known RBP	13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161	CLEC19A	Q6UXS0	136 aa		13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161	OR13F1	Q8NGS4	319 aa		13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161	CCDC140	Q96MF4	163 aa		13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161	FANCD2OS	Q96PS1	177 aa		13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161		Q9H521	79 aa		13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161	ETV7	Q9Y603	341 aa		13.95	□□□□□ -0.18
SREBF1-206	ENST00000423161	STARD9	Q9P2P6	4700 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	DHFR	P00374	187 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	CRYGC	P07315	174 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	MYOD1	P15172	320 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	PSMB6	P28072	239 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	ARL3	P36405	182 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	MSMO1	Q15800	293 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	GUCA2B	Q16661	112 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	TIMM50	Q3ZCQ8	353 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	IDNK	Q5T6J7	187 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	DEFB125	Q8N687	156 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	LYST	Q99698	3801 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	WFDC10A	Q9H1F0	79 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	HIPK2	Q9H2X6	1198 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	RNF167	Q9H6Y7	350 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	ZC4H2	Q9NQZ6	224 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	BET1L	Q9NYM9	111 aa		13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	TECR	Q9NZ01	308 aa	Known RBP	13.94	□□□□□ -0.18
SREBF1-206	ENST00000423161	SACS	Q9NZJ4	4579 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	LOC100506127	A0A0U1RQW1	187 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	ATP6V1G2	O95670	118 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	PPY	P01298	95 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	REG1A	P05451	166 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	CTRB1	P17538	263 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	HLA-G	P17693	338 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	CTRB2	Q6GPI1	263 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	OR4A47	Q6IF82	309 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	ZNF773	Q6PK81	442 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	HOGA1	Q86XE5	327 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	GPHB5	Q86YW7	130 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	SPAG16	Q8N0X2	631 aa		13.93	□□□□□ -0.18
SREBF1-206	ENST00000423161	CACNG8	Q8WXS5	425 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms