RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 CRYGCP07315 174 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 ZNF735P0CB33 412 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 CD36P16671 472 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 MAS1LP35410 378 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 RPL27AP46776 148 aaKnown RBP12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 RPL30P62888 115 aaKnown RBP12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 SSX1Q16384 188 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 KLK9Q2XQG4 91 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 OR4A47Q6IF82 309 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 C19orf35Q6ZS72 473 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 VKORC1L1Q8N0U8 176 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 FYTTD1Q96QD9 318 aaKnown RBP12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 OR2A7Q96R45 310 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 KLK9Q9UKQ9 250 aa12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 RBMX2Q9Y388 322 aaKnown RBP12.6□□□□□ -0.39
UPF3AP3-201ENST00000420996 METTL21EPA6NDL7 271 aa12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 NUPR2A6NF83 97 aa12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 IFITM5A6NNB3 132 aa12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 PDCD5O14737 125 aa12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 KBTBD11O94819 623 aa12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 DHFRP00374 187 aa12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 CTXN2P0C2S0 81 aa12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 DTYMKP23919 212 aa12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 OR2B11Q5JQS5 317 aa12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 WFDC3Q8IUB2 231 aa12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 PUSL1Q8N0Z8 303 aaKnown RBP12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 OR4S2Q8NH73 311 aa12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 TMEM167AQ8TBQ9 72 aa12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 EEF1AKMT3Q96AZ1 226 aa12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 MGLLQ99685 303 aa12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 HSD17B10Q99714 261 aaKnown RBP12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 S4R3C0 116 aa12.59□□□□□ -0.39
UPF3AP3-201ENST00000420996 TRAV1-2A0A0B4J238 106 aa12.58□□□□□ -0.4
UPF3AP3-201ENST00000420996 TRAV25A0A0B4J276 109 aa12.58□□□□□ -0.4
UPF3AP3-201ENST00000420996 A0A1B0GW64 132 aa12.58□□□□□ -0.4
UPF3AP3-201ENST00000420996 RGS10O43665 173 aa12.58□□□□□ -0.4
UPF3AP3-201ENST00000420996 SCAF4O95104 1147 aaKnown RBP12.58□□□□□ -0.4
UPF3AP3-201ENST00000420996 IGLV2-14P01704 120 aa12.58□□□□□ -0.4
UPF3AP3-201ENST00000420996 AREGP15514 252 aa12.58□□□□□ -0.4
UPF3AP3-201ENST00000420996 HIST1H1BP16401 226 aaKnown RBP12.58□□□□□ -0.4
UPF3AP3-201ENST00000420996 PSMB6P28072 239 aa12.58□□□□□ -0.4
UPF3AP3-201ENST00000420996 OR10A3P58181 314 aa12.58□□□□□ -0.4
UPF3AP3-201ENST00000420996 PMS2P11Q13670 270 aa12.58□□□□□ -0.4
UPF3AP3-201ENST00000420996 ARL6IP1Q15041 203 aa12.58□□□□□ -0.4
UPF3AP3-201ENST00000420996 TM4SF20Q53R12 229 aa12.58□□□□□ -0.4
UPF3AP3-201ENST00000420996 KRTAP17-1Q9BYP8 105 aa12.58□□□□□ -0.4
UPF3AP3-201ENST00000420996 ELF5Q9UKW6 265 aaPredicted RBP12.58□□□□□ -0.4
UPF3AP3-201ENST00000420996 TP53TG1Q9Y2A0 90 aa12.58□□□□□ -0.4
UPF3AP3-201ENST00000420996 TRBV7-1A0A0A6YYK4 115 aa12.57□□□□□ -0.4
UPF3AP3-201ENST00000420996 IGKV1D-13A0A0B4J2D9 117 aa12.57□□□□□ -0.4
UPF3AP3-201ENST00000420996 A0A0J9YWU9 116 aa12.57□□□□□ -0.4
UPF3AP3-201ENST00000420996 C8orf88P0DMB2 117 aa12.57□□□□□ -0.4
UPF3AP3-201ENST00000420996 IGKV1-13P0DP09 117 aa12.57□□□□□ -0.4
UPF3AP3-201ENST00000420996 CTRB1P17538 263 aa12.57□□□□□ -0.4
UPF3AP3-201ENST00000420996 NFYAP23511 347 aaPredicted RBP12.57□□□□□ -0.4
UPF3AP3-201ENST00000420996 TNFRSF9Q07011 255 aa12.57□□□□□ -0.4
UPF3AP3-201ENST00000420996 CTRB2Q6GPI1 263 aa12.57□□□□□ -0.4
UPF3AP3-201ENST00000420996 CEMP1Q6PRD7 247 aaPredicted RBP12.57□□□□□ -0.4
UPF3AP3-201ENST00000420996 BTNL8Q6UX41 500 aa12.57□□□□□ -0.4
UPF3AP3-201ENST00000420996 MARC2Q969Z3 335 aa12.57□□□□□ -0.4
UPF3AP3-201ENST00000420996 CCDC90BQ9GZT6 254 aa12.57□□□□□ -0.4
UPF3AP3-201ENST00000420996 HRASP01112 189 aa12.56□□□□□ -0.4
UPF3AP3-201ENST00000420996 GALP22466 123 aa12.56□□□□□ -0.4
UPF3AP3-201ENST00000420996 BRWD1-AS2P59051 145 aa12.56□□□□□ -0.4
UPF3AP3-201ENST00000420996 EIF4EBP1Q13541 118 aaPredicted RBP12.56□□□□□ -0.4
UPF3AP3-201ENST00000420996 CDNFQ49AH0 187 aa12.56□□□□□ -0.4
UPF3AP3-201ENST00000420996 RBPMS2Q6ZRY4 209 aaKnown RBP12.56□□□□□ -0.4
UPF3AP3-201ENST00000420996 Q6ZWC4 215 aa12.56□□□□□ -0.4
UPF3AP3-201ENST00000420996 OR1L6Q8NGR2 347 aa12.56□□□□□ -0.4
UPF3AP3-201ENST00000420996 TCTEX1D2Q8WW35 142 aa12.56□□□□□ -0.4
UPF3AP3-201ENST00000420996 CXorf58Q96LI9 332 aa12.56□□□□□ -0.4
UPF3AP3-201ENST00000420996 ATG5Q9H1Y0 275 aa12.56□□□□□ -0.4
UPF3AP3-201ENST00000420996 DCSTAMPQ9H295 470 aa12.56□□□□□ -0.4
UPF3AP3-201ENST00000420996 MRPL27Q9P0M9 148 aaKnown RBP12.56□□□□□ -0.4
UPF3AP3-201ENST00000420996 IGLV11-55A0A075B6I3 123 aa12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 SPRY2O43597 315 aa12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 CLEC3BP05452 202 aa12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 DEFA4P12838 97 aa12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 ATF4P18848 351 aaPredicted RBP12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 CRHBPP24387 322 aa12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 BMI1P35226 326 aa12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 APOC4P55056 127 aa12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 ELLP55199 621 aaPredicted RBP12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 RPL8P62917 257 aaKnown RBP12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 EWSR1Q01844 656 aaKnown RBP eCLIP12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 HACD4Q5VWC8 232 aa12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 CNIH2Q6PI25 160 aa12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 UNQ9165/PRO28630Q6UXU0 137 aa12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 PRSS48Q7RTY5 328 aa12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 LYG2Q86SG7 212 aa12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 MFSD4AQ8N468 514 aa12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 OR2C3Q8N628 320 aa12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 SPATA2Q9UM82 520 aa12.55□□□□□ -0.4
UPF3AP3-201ENST00000420996 FRAS1Q86XX4 4008 aa12.54□□□□□ -0.4
UPF3AP3-201ENST00000420996 MFSD2BA6NFX1 497 aa12.54□□□□□ -0.4
UPF3AP3-201ENST00000420996 UBE2CO00762 179 aa12.54□□□□□ -0.4
UPF3AP3-201ENST00000420996 RAB3BP20337 219 aa12.54□□□□□ -0.4
UPF3AP3-201ENST00000420996 MYL9P24844 172 aa12.54□□□□□ -0.4
UPF3AP3-201ENST00000420996 ZNF585BQ52M93 769 aa12.54□□□□□ -0.4
UPF3AP3-201ENST00000420996 ZNF66Q6ZN08 573 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms