RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 RTL8BQ17RB0 113 aa10.66□□□□□ -0.7
RAPGEF1-204ENST00000414781 TBC1D26Q86UD7 250 aa10.66□□□□□ -0.7
RAPGEF1-204ENST00000414781 TCTEX1D2Q8WW35 142 aa10.66□□□□□ -0.7
RAPGEF1-204ENST00000414781 DDB2Q92466 427 aa10.66□□□□□ -0.7
RAPGEF1-204ENST00000414781 AIFM2Q9BRQ8 373 aa10.66□□□□□ -0.7
RAPGEF1-204ENST00000414781 NAA60Q9H7X0 242 aa10.66□□□□□ -0.7
RAPGEF1-204ENST00000414781 H0Y980 276 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 RBFOX2O43251 390 aaKnown RBP eCLIP10.65□□□□□ -0.71e-5■■■■□ 19.7
RAPGEF1-204ENST00000414781 TNFSF12O43508 249 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 PROP1O75360 226 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 ATG12O94817 140 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 SERPINE2P07093 398 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 OR4E1P0C645 316 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 CT45A6P0DMU7 189 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 CT45A5P0DMU8 189 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 CT45A7P0DMV0 189 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 RPA2P15927 270 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 ANXA7P20073 488 aaKnown RBP10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 VAMP1P23763 118 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 MYCNOSP40205 109 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 Q6ZS46 218 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 MOB3BQ86TA1 216 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 SBSPONQ8IVN8 264 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 ADAD2Q8NCV1 583 aaKnown RBP10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 GALNT14Q96FL9 552 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 HILPDAQ9Y5L2 63 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 DSCAML1Q8TD84 2053 aa10.65□□□□□ -0.7
RAPGEF1-204ENST00000414781 IGHV1-3A0A0C4DH29 117 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 SNRPGP15A8MWD9 76 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 SFT2D2O95562 160 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 HLA-AP01891 365 aaKnown RBP10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 SPNP16150 400 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 CD1BP29016 333 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 DYNLT3P51808 116 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 RAB25P57735 213 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 EIF4EBP1Q13541 118 aaPredicted RBP10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 GLDNQ6ZMI3 551 aaPredicted RBP10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 LHFPL4Q7Z7J7 247 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 LYG2Q86SG7 212 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 PDPNQ86YL7 162 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 DRAXINQ8NBI3 349 aaPredicted RBP10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 OR5AN1Q8NGI8 311 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 OR51H1Q8NH63 302 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 OR4S2Q8NH73 311 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 COQ8AQ8NI60 647 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 RNF5Q99942 180 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 NABP2Q9BQ15 211 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 ALMS1Q8TCU4 4167 aa10.64□□□□□ -0.71
RAPGEF1-204ENST00000414781 C9orf170A2RU37 121 aa10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 H7C2Y5 167 aa10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 CREBL2O60519 120 aaPredicted RBP10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 FAM106CPP0CH98 169 aa10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 REG1BP48304 166 aa10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 PPP1R1AQ13522 171 aa10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 C9orf66Q5T8R8 295 aa10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 THNSL2Q86YJ6 484 aa10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 SPAG16Q8N0X2 631 aa10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 ZNF383Q8NA42 475 aa10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 ZNF431Q8TF32 576 aaPredicted RBP10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 TMEM230Q96A57 120 aa10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 FLYWCH2Q96CP2 140 aaKnown RBP10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 P2RX4Q99571 388 aa10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 PHB2Q99623 299 aa10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 MRPL20Q9BYC9 149 aaKnown RBP10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 TMEM222Q9H0R3 208 aa10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 SLC35D1Q9NTN3 355 aa10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 WASHC3Q9Y3C0 194 aa10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 PLECQ15149 4684 aaKnown RBP10.63□□□□□ -0.71
RAPGEF1-204ENST00000414781 A0A0B4J2A0 478 aa10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 FCGR3BO75015 233 aa10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 HPRT1P00492 218 aa10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 HRASP01112 189 aa10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 OR5AC1P0C628 307 aa10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 UCP1P25874 307 aa10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 DHRS2Q13268 280 aa10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 TATDN3Q17R31 274 aa10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 ZNF695Q8IW36 515 aa10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 LGI3Q8N145 548 aa10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 OSR1Q8TAX0 266 aaPredicted RBP10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 CAPSLQ8WWF8 208 aa10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 IL22RA2Q969J5 263 aa10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 C5orf30Q96GV9 206 aa10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 EDA2RQ9HAV5 297 aa10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 PLEKHA2Q9HB19 425 aa10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 SHPKQ9UHJ6 478 aa10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 ZNF256Q9Y2P7 627 aaPredicted RBP10.62□□□□□ -0.71
RAPGEF1-204ENST00000414781 A0A1W2PPI3 338 aa10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 LINC00473A8K010 186 aa10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 H0YJW9 148 aa10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 CDS2O95674 445 aa10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 LPAR6P43657 344 aa10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 LGALS7P47929 136 aa10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 RPL23AP62750 156 aaKnown RBP10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 RPL30P62888 115 aaKnown RBP10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 SUPT4H1P63272 117 aaKnown RBP10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 DIAPH2-AS1Q14236 149 aa10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 LDLRAD2Q5SZI1 272 aa10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 C16orf82Q7Z2V1 217 aa10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 OR2T10Q8NGZ9 312 aa10.61□□□□□ -0.71
RAPGEF1-204ENST00000414781 CASTOR1Q8WTX7 329 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms