RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 DGCR2P98153 550 aa11.48□□□□□ -0.57
CHD1-202ENST00000414220 SSX9Q7RTT3 188 aa11.48□□□□□ -0.57
CHD1-202ENST00000414220 OR5T1Q8NG75 326 aa11.48□□□□□ -0.57
CHD1-202ENST00000414220 TMEM167AQ8TBQ9 72 aa11.48□□□□□ -0.57
CHD1-202ENST00000414220 DGCR14Q96DF8 476 aaKnown RBP11.48□□□□□ -0.57
CHD1-202ENST00000414220 GPHA2Q96T91 129 aa11.48□□□□□ -0.57
CHD1-202ENST00000414220 RSRP1Q9BUV0 290 aa11.48□□□□□ -0.57
CHD1-202ENST00000414220 TINAGL1Q9GZM7 467 aaPredicted RBP11.48□□□□□ -0.57
CHD1-202ENST00000414220 FXYD6Q9H0Q3 95 aa11.48□□□□□ -0.57
CHD1-202ENST00000414220 COA4Q9NYJ1 87 aa11.48□□□□□ -0.57
CHD1-202ENST00000414220 BET1LQ9NYM9 111 aa11.48□□□□□ -0.57
CHD1-202ENST00000414220 C13orf42A0A1B0GVH6 325 aa11.47□□□□□ -0.57
CHD1-202ENST00000414220 RAMP3O60896 148 aa11.47□□□□□ -0.57
CHD1-202ENST00000414220 TRGV3P03979 118 aa11.47□□□□□ -0.57
CHD1-202ENST00000414220 CD74P04233 296 aa11.47□□□□□ -0.57
CHD1-202ENST00000414220 RPL8P62917 257 aaKnown RBP11.47□□□□□ -0.57
CHD1-202ENST00000414220 SCGB2B2Q4G0G5 96 aa11.47□□□□□ -0.57
CHD1-202ENST00000414220 PHLDA2Q53GA4 152 aa11.47□□□□□ -0.57
CHD1-202ENST00000414220 C19orf54Q5BKX5 351 aa11.47□□□□□ -0.57
CHD1-202ENST00000414220 MRPL41Q8IXM3 137 aaKnown RBP11.47□□□□□ -0.57
CHD1-202ENST00000414220 VKORC1L1Q8N0U8 176 aa11.47□□□□□ -0.57
CHD1-202ENST00000414220 PUSL1Q8N0Z8 303 aaKnown RBP11.47□□□□□ -0.57
CHD1-202ENST00000414220 CCDC71LQ8N9Z2 235 aa11.47□□□□□ -0.57
CHD1-202ENST00000414220 TERB2Q8NHR7 220 aa11.47□□□□□ -0.57
CHD1-202ENST00000414220 MYOZ3Q8TDC0 251 aa11.47□□□□□ -0.57
CHD1-202ENST00000414220 MS4A10Q96PG2 267 aa11.47□□□□□ -0.57
CHD1-202ENST00000414220 KLK15Q9H2R5 256 aa11.47□□□□□ -0.57
CHD1-202ENST00000414220 FAM212BQ9NTI7 297 aaPredicted RBP11.47□□□□□ -0.57
CHD1-202ENST00000414220 ZMAT5Q9UDW3 170 aaKnown RBP11.47□□□□□ -0.57
CHD1-202ENST00000414220 MGAM2Q2M2H8 2515 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 GSTZ1O43708 216 aaPredicted RBP11.46□□□□□ -0.57
CHD1-202ENST00000414220 ATG12O94817 140 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 DHFRP00374 187 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 OR8U8P0C7N1 319 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 OR9G9P0C7N8 305 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 FAUP35544 74 aaKnown RBP11.46□□□□□ -0.57
CHD1-202ENST00000414220 LPAR6P43657 344 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 RPL27AP46776 148 aaKnown RBP11.46□□□□□ -0.57
CHD1-202ENST00000414220 BRWD1-AS2P59051 145 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 RUNX1Q01196 453 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 POU2AF1Q16633 256 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 OR4A47Q6IF82 309 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 C18orf65Q6ZTR6 163 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 LINC00482Q8N8I6 264 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 OR11H1Q8NG94 326 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 OR1N2Q8NGR9 330 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 P2RX4Q99571 388 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 PRRT1Q99946 306 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 COMMD5Q9GZQ3 224 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 RBM38Q9H0Z9 239 aaKnown RBP11.46□□□□□ -0.57
CHD1-202ENST00000414220 COPZ2Q9P299 210 aa11.46□□□□□ -0.57
CHD1-202ENST00000414220 WNK1Q9H4A3 2382 aa11.46□□□□□ -0.58
CHD1-202ENST00000414220 SOX15O60248 233 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 SNAPC5O75971 98 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 S1PR2O95136 353 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 BRI3O95415 125 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 SERPINE2P07093 398 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 HLA-GP17693 338 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 PTBP1P26599 531 aaKnown RBP eCLIP11.45□□□□□ -0.58
CHD1-202ENST00000414220 AP3S2P59780 193 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 DEFA6Q01524 100 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 ZNF616Q08AN1 781 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 PYDC2Q56P42 97 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 SPANXN2Q5MJ10 180 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 SAMD5Q5TGI4 173 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 TBC1D26Q86UD7 250 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 LHFPL1Q86WI0 220 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 RAX2Q96IS3 184 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 USMG5Q96IX5 58 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 SCGB3A2Q96PL1 93 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 FYTTD1Q96QD9 318 aaKnown RBP11.45□□□□□ -0.58
CHD1-202ENST00000414220 TSC22D3Q99576 134 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 SLC2A9Q9NRM0 540 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 SCP2D1Q9UJQ7 156 aa11.45□□□□□ -0.58
CHD1-202ENST00000414220 C14orf166Q9Y224 244 aaKnown RBP11.45□□□□□ -0.58
CHD1-202ENST00000414220 MARCH11A6NNE9 402 aa11.44□□□□□ -0.58
CHD1-202ENST00000414220 G3V4G9 280 aa11.44□□□□□ -0.58
CHD1-202ENST00000414220 UPK2O00526 184 aa11.44□□□□□ -0.58
CHD1-202ENST00000414220 B3GALNT1O75752 331 aa11.44□□□□□ -0.58
CHD1-202ENST00000414220 FGF2P09038 288 aa11.44□□□□□ -0.58
CHD1-202ENST00000414220 LGALS1P09382 135 aaKnown RBP11.44□□□□□ -0.58
CHD1-202ENST00000414220 IGLL1P15814 213 aa11.44□□□□□ -0.58
CHD1-202ENST00000414220 RPA2P15927 270 aa11.44□□□□□ -0.58
CHD1-202ENST00000414220 SSBP2P81877 361 aaPredicted RBP11.44□□□□□ -0.58
CHD1-202ENST00000414220 KIAA0141Q14154 515 aaPredicted RBP11.44□□□□□ -0.58
CHD1-202ENST00000414220 THOC7Q6I9Y2 204 aaKnown RBP11.44□□□□□ -0.58
CHD1-202ENST00000414220 ETV3LQ6ZN32 361 aa11.44□□□□□ -0.58
CHD1-202ENST00000414220 C1QL4Q86Z23 238 aa11.44□□□□□ -0.58
CHD1-202ENST00000414220 CADM3Q8N126 398 aa11.44□□□□□ -0.58
CHD1-202ENST00000414220 OR5B12Q96R08 314 aa11.44□□□□□ -0.58
CHD1-202ENST00000414220 THAP7Q9BT49 309 aaPredicted RBP11.44□□□□□ -0.58
CHD1-202ENST00000414220 GNB4Q9HAV0 340 aa11.44□□□□□ -0.58
CHD1-202ENST00000414220 TMEM140Q9NV12 185 aa11.44□□□□□ -0.58
CHD1-202ENST00000414220 FKBP11Q9NYL4 201 aa11.44□□□□□ -0.58
CHD1-202ENST00000414220 LINC01619G3V211 115 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 I3L521 148 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 CYB5BO43169 146 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 KRASP01116 189 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 HSPB1P04792 205 aaKnown RBP11.43□□□□□ -0.58
CHD1-202ENST00000414220 APELAP0DMC3 54 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms