RNA–Protein interactions for RNA: ENST00000410604.1

RNU2-39P-201, Transcript of RNA, U2 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU2-39P, Length 198 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-39P-201ENST00000410604 RPL28P46779 137 aaKnown RBP0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 AQP4P55087 323 aa0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 TMED1Q13445 227 aa0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 LRRC75BQ2VPJ9 315 aa0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 ACSM3Q53FZ2 586 aa0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 SBSNQ6UWP8 590 aa0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 FP248Q71RG6 208 aaPredicted RBP0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 SLC36A1Q7Z2H8 476 aa0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 HAVCR2Q8TDQ0 301 aa0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 EEF1AKMT1Q8WVE0 214 aa0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 GNPNAT1Q96EK6 184 aaPredicted RBP0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 TMA16Q96EY4 203 aaKnown RBP0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 ZNF514Q96K75 400 aaPredicted RBP0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 ATP6V1G3Q96LB4 118 aa0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 C7orf50Q9BRJ6 194 aaKnown RBP0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 CST9LQ9H4G1 147 aa0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 HRASLSQ9HDD0 168 aa0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 SOX21Q9Y651 276 aaPredicted RBP0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 GMEB1Q9Y692 573 aa0.76□□□□□ -2.29
RNU2-39P-201ENST00000410604 GLI3P10071 1580 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 KIF15Q9NS87 1388 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 IGKV2-40A0A087WW87 121 aaPredicted RBP0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 TRAV38-1A0A0B4J264 116 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 A0A0D9SEW6 157 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 CREBL2O60519 120 aaPredicted RBP0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 MRPS14O60783 128 aaKnown RBP0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 IGKV2D-40P01614 121 aaPredicted RBP0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 HLA-DRAP01903 254 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 CRPP02741 224 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 G6PCP35575 357 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 UBE2G2P60604 165 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 RAB14P61106 215 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 AKR1C1Q04828 323 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 MOGQ16653 247 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 C7orf65Q6ZTY9 151 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 UBL4BQ8N7F7 174 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 DNAJB3Q8WWF6 145 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 MBD3L1Q8WWY6 194 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 KCTD7Q96MP8 289 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 IMP3Q9NV31 184 aaKnown RBP0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 CFAP45Q9UL16 551 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 ANAPC10Q9UM13 185 aa0.75□□□□□ -2.29
RNU2-39P-201ENST00000410604 TNRC6BQ9UPQ9 1833 aaKnown RBP0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 F5H768 121 aa0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 KRT75O95678 551 aa0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 TFPTP0C1Z6 253 aa0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 CDC34P49427 236 aaPredicted RBP0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 HIST1H4AP62805 103 aaKnown RBP0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 Q1T7F1 81 aa0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 DYNAPQ8N1N2 210 aa0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 UMODL1-AS1Q8N2C9 162 aa0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 Q8N402 240 aa0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 OR2T27Q8NH04 317 aa0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 SGMS2Q8NHU3 365 aa0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 JOSD2Q8TAC2 188 aa0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 CHST6Q9GZX3 395 aa0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 XAGE1AQ9HD64 81 aa0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 PRELID1Q9Y255 219 aa0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 COQ4Q9Y3A0 265 aa0.74□□□□□ -2.29
RNU2-39P-201ENST00000410604 IGKV3-7A0A075B6H7 116 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 TMEM269A0A1B0GVZ9 245 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 TRAPPC13A5PLN9 417 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 OR51F1A6NGY5 319 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 COCHO43405 550 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 NSA2O95478 260 aaKnown RBP0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 PPBPP02775 128 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 RPSAP08865 295 aaKnown RBP0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 RPL30P62888 115 aaKnown RBP0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 SKP1P63208 163 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 PPP1R1AQ13522 171 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 ARHGAP11BQ3KRB8 267 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 C1orf194Q5T5A4 169 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 FAM78BQ5VT40 261 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 TNFAIP8L2Q6P589 184 aaPredicted RBP0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 PLEKHG7Q6ZR37 379 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 RPP25LQ8N5L8 163 aaKnown RBP0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 TMEM251Q8N6I4 163 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 C9orf163Q8N9P6 203 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 UPF3BQ9BZI7 483 aaKnown RBP0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 CXorf21Q9HAI6 301 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 PLEKHJ1Q9NW61 149 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 MED9Q9NWA0 146 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 NAT8Q9UHE5 227 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 POLR1DQ9Y2S0 133 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 TNRC6AQ8NDV7 1962 aaKnown RBP0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 DOCK5Q9H7D0 1870 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 KIF13BQ9NQT8 1826 aa0.73□□□□□ -2.29
RNU2-39P-201ENST00000410604 MEIS3P1A6NDR6 274 aa0.72□□□□□ -2.29
RNU2-39P-201ENST00000410604 GOLGA8KD6RF30 607 aa0.72□□□□□ -2.29
RNU2-39P-201ENST00000410604 TRAPPC2LH3BP13 241 aa0.72□□□□□ -2.29
RNU2-39P-201ENST00000410604 GOLGA8MH3BSY2 632 aa0.72□□□□□ -2.29
RNU2-39P-201ENST00000410604 LST1O00453 97 aa0.72□□□□□ -2.29
RNU2-39P-201ENST00000410604 ITGB1BP1O14713 200 aa0.72□□□□□ -2.29
RNU2-39P-201ENST00000410604 ORC5O43913 435 aa0.72□□□□□ -2.29
RNU2-39P-201ENST00000410604 REG1AP05451 166 aa0.72□□□□□ -2.29
RNU2-39P-201ENST00000410604 IL3P08700 152 aa0.72□□□□□ -2.29
RNU2-39P-201ENST00000410604 CCL1P22362 96 aa0.72□□□□□ -2.29
RNU2-39P-201ENST00000410604 TNFAIP6P98066 277 aaPredicted RBP0.72□□□□□ -2.29
RNU2-39P-201ENST00000410604 ELOBQ15370 118 aa0.72□□□□□ -2.29
RNU2-39P-201ENST00000410604 TNFAIP8L3Q5GJ75 292 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms