RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 LIPFP07098 398 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 OR9G9P0C7N8 305 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 SPP1P10451 314 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 LCN2P80188 198 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 EIF4E3Q8N5X7 224 aaKnown RBP15.66■□□□□ 0.1
LMNB1-202ENST00000395354 ST6GALNAC6Q969X2 333 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 ATP5SQ99766 215 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 TMEM140Q9NV12 185 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 OTOGQ6ZRI0 2925 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 WNK2Q9Y3S1 2297 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 LOC105371242A0A075B767 164 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 MFSD2BA6NFX1 497 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 SMAD7O15105 426 aaKnown RBP15.66■□□□□ 0.1
LMNB1-202ENST00000395354 RBMXL2O75526 392 aaKnown RBP15.66■□□□□ 0.1
LMNB1-202ENST00000395354 APOA2P02652 100 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 PRRX1P54821 245 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 SPCS3P61009 180 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 HBG1P69891 147 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 HBG2P69892 147 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 RELBQ01201 579 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 TMEM249Q2WGJ8 235 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 TMEM14EPQ6UXP3 125 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 HSD17B13Q7Z5P4 300 aaPredicted RBP15.66■□□□□ 0.1
LMNB1-202ENST00000395354 ZNF429Q86V71 674 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 OR5AN1Q8NGI8 311 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 DTD1Q8TEA8 209 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 C1orf159Q96HA4 380 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 RHOVQ96L33 236 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 PCGF1Q9BSM1 259 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 LPAR2Q9HBW0 351 aa15.66■□□□□ 0.1
LMNB1-202ENST00000395354 A8MXK9 166 aa15.65■□□□□ 0.1
LMNB1-202ENST00000395354 CLINT1Q14677 625 aa15.65■□□□□ 0.1
LMNB1-202ENST00000395354 AANATQ16613 207 aa15.65■□□□□ 0.1
LMNB1-202ENST00000395354 OSR1Q8TAX0 266 aaPredicted RBP15.65■□□□□ 0.1
LMNB1-202ENST00000395354 QTRT1Q9BXR0 403 aaKnown RBP15.65■□□□□ 0.1
LMNB1-202ENST00000395354 ZNRD1Q9P1U0 126 aa15.65■□□□□ 0.1
LMNB1-202ENST00000395354 NUDT19A8MXV4 375 aa15.64■□□□□ 0.09
LMNB1-202ENST00000395354 B4DSR2 109 aa15.64■□□□□ 0.09
LMNB1-202ENST00000395354 H3BP45 60 aa15.64■□□□□ 0.09
LMNB1-202ENST00000395354 FBXO24O75426 580 aa15.64■□□□□ 0.09
LMNB1-202ENST00000395354 RAB5CP51148 216 aa15.64■□□□□ 0.09
LMNB1-202ENST00000395354 BLOC1S1P78537 153 aa15.64■□□□□ 0.09
LMNB1-202ENST00000395354 SPNS3Q6ZMD2 512 aa15.64■□□□□ 0.09
LMNB1-202ENST00000395354 SSX9Q7RTT3 188 aa15.64■□□□□ 0.09
LMNB1-202ENST00000395354 BEND2Q8NDZ0 799 aa15.64■□□□□ 0.09
LMNB1-202ENST00000395354 OR13D1Q8NGV5 346 aa15.64■□□□□ 0.09
LMNB1-202ENST00000395354 TSNAXQ99598 290 aaKnown RBP15.64■□□□□ 0.09
LMNB1-202ENST00000395354 MRPL20Q9BYC9 149 aaKnown RBP15.64■□□□□ 0.09
LMNB1-202ENST00000395354 CSPG4Q6UVK1 2322 aa15.64■□□□□ 0.09
LMNB1-202ENST00000395354 ABCA1O95477 2261 aa15.64■□□□□ 0.09
LMNB1-202ENST00000395354 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.64■□□□□ 0.096e-10■□□□□ 10.9
LMNB1-202ENST00000395354 IGHV2-26A0A0B4J1V2 119 aa15.63■□□□□ 0.09
LMNB1-202ENST00000395354 CEBPZOSA8MTT3 80 aa15.63■□□□□ 0.09
LMNB1-202ENST00000395354 C22orf46C9J442 243 aa15.63■□□□□ 0.09
LMNB1-202ENST00000395354 H0YJW9 148 aa15.63■□□□□ 0.09
LMNB1-202ENST00000395354 IL6RP08887 468 aaPredicted RBP15.63■□□□□ 0.09
LMNB1-202ENST00000395354 TMEM267Q0VDI3 215 aaPredicted RBP15.63■□□□□ 0.09
LMNB1-202ENST00000395354 SPANXN5Q5MJ07 72 aa15.63■□□□□ 0.09
LMNB1-202ENST00000395354 OR4A47Q6IF82 309 aa15.63■□□□□ 0.09
LMNB1-202ENST00000395354 PDPNQ86YL7 162 aa15.63■□□□□ 0.09
LMNB1-202ENST00000395354 TMEM217Q8N7C4 229 aa15.63■□□□□ 0.09
LMNB1-202ENST00000395354 LINC01356Q8N9X3 169 aa15.63■□□□□ 0.09
LMNB1-202ENST00000395354 GNPNAT1Q96EK6 184 aaPredicted RBP15.63■□□□□ 0.09
LMNB1-202ENST00000395354 NABP2Q9BQ15 211 aa15.63■□□□□ 0.09
LMNB1-202ENST00000395354 CLEC7AQ9BXN2 247 aa15.63■□□□□ 0.09
LMNB1-202ENST00000395354 FOXA2Q9Y261 457 aaPredicted RBP15.63■□□□□ 0.09
LMNB1-202ENST00000395354 POLR3KQ9Y2Y1 108 aaPredicted RBP15.63■□□□□ 0.09
LMNB1-202ENST00000395354 STRAPQ9Y3F4 350 aaKnown RBP15.63■□□□□ 0.09
LMNB1-202ENST00000395354 C15orf61A6NNL5 157 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 ZNF705EA8MWA4 302 aaPredicted RBP15.62■□□□□ 0.09
LMNB1-202ENST00000395354 M0R1W7 72 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 IGLV1-47P01700 117 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 MSMBP08118 114 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 IGHV4-31P0DP07 118 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 MC5RP33032 325 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 TMEM177Q53S58 311 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 VKORC1L1Q8N0U8 176 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 CLCC1Q96S66 551 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 PARD6GQ9BYG4 376 aaPredicted RBP15.62■□□□□ 0.09
LMNB1-202ENST00000395354 MMP26Q9NRE1 261 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 IFNA5P01569 189 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 IFNA17P01571 189 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 FGF2P09038 288 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 METTL15P1P0C7V9 234 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 RPP30P78346 268 aaKnown RBP15.62■□□□□ 0.09
LMNB1-202ENST00000395354 PAX2Q02962 417 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 ATP6V1FQ16864 119 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 HLA-DRB5Q30154 266 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 TGIF2LXQ8IUE1 241 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 HSD17B11Q8NBQ5 300 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 TMEM14BQ9NUH8 114 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 BET1LQ9NYM9 111 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 PRNDQ9UKY0 176 aa15.62■□□□□ 0.09
LMNB1-202ENST00000395354 AMMECR1Q9Y4X0 333 aaPredicted RBP15.62■□□□□ 0.09
LMNB1-202ENST00000395354 ZANQ9Y493 2812 aa15.61■□□□□ 0.09
LMNB1-202ENST00000395354 RAB13P51153 203 aa15.61■□□□□ 0.09
LMNB1-202ENST00000395354 OR2B8PP59922 312 aa15.61■□□□□ 0.09
LMNB1-202ENST00000395354 CYB5R2Q6BCY4 276 aa15.61■□□□□ 0.09
LMNB1-202ENST00000395354 C1orf122Q6ZSJ8 110 aa15.61■□□□□ 0.09
LMNB1-202ENST00000395354 PUSL1Q8N0Z8 303 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms