RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 HIST1H1CP16403 213 aaKnown RBP0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 DDTP30046 118 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 CA5AP35218 305 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 G6PCP35575 357 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 TPI1P60174 286 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 HIST1H4AP62805 103 aaKnown RBP0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 RPS24P62847 133 aaKnown RBP0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 C4orf26Q17RF5 130 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 BOD1L2Q8IYS8 172 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 SLC37A2Q8TED4 501 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 ASB13Q8WXK3 278 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 SFRP2Q96HF1 295 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 PACRGQ96M98 296 aaPredicted RBP0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 DHRS9Q9BPW9 319 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 TIPINQ9BVW5 301 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 VCX3BQ9H321 246 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 CST9LQ9H4G1 147 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 MED9Q9NWA0 146 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 CD300AQ9UGN4 299 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 CFAP45Q9UL16 551 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 TIMM9Q9Y5J7 89 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 COL12A1Q99715 3063 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 MYOFQ9NZM1 2061 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 TLN2Q9Y4G6 2542 aa0.74□□□□□ -2.29
RNU6-48P-201ENST00000384161 FAT4Q6V0I7 4981 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 STAB2Q8WWQ8 2551 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 SPEGQ15772 3267 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 GVINP1Q7Z2Y8 2422 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 IGKV3D-7A0A0C4DH55 119 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 IGKV3OR2-268A0A0C4DH90 116 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 TRBV6-5A0A0K0K1A5 114 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 GOLGA6L10A6NI86 522 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 HMSDA8MTL9 139 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 C9JCJ5 164 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 SMLR1H3BR10 107 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 CREBL2O60519 120 aaPredicted RBP0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 MRPS14O60783 128 aaKnown RBP0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 PGLYRP1O75594 196 aaPredicted RBP0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 KRT75O95678 551 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 IL6P05231 212 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 HLA-DQB2P05538 268 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 OCMP0CE72 109 aaPredicted RBP0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 GPX2P18283 190 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 CCR7P32248 378 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 EVX1P49640 407 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 HLA-DRB3P79483 266 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 TMED1Q13445 227 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 NNATQ16517 81 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 TMEM155Q4W5P6 130 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 UNQ6190/PRO20217Q6UXQ8 127 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 FAM19A5Q7Z5A7 132 aaPredicted RBP0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 CD302Q8IX05 232 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 OR51T1Q8NGJ9 327 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 OR1L8Q8NGR8 309 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 JOSD2Q8TAC2 188 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 MBD3L1Q8WWY6 194 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 TMA16Q96EY4 203 aaKnown RBP0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 ANKRD36BP1Q96IX9 119 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 NMNAT3Q96T66 252 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 DCUN1D5Q9BTE7 237 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 NDEL1Q9GZM8 345 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 NSRP1Q9H0G5 558 aaKnown RBP0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 SPACA1Q9HBV2 294 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 XAGE1AQ9HD64 81 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 ZNHIT6Q9NWK9 470 aaKnown RBP0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 RANBP2P49792 3224 aaKnown RBP0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 TLN1Q9Y490 2541 aaKnown RBP0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 DNAH12Q6ZR08 3092 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 ITPR2Q14571 2701 aa0.73□□□□□ -2.29
RNU6-48P-201ENST00000384161 ABCC12Q96J65 1359 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 DLG5Q8TDM6 1919 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 RAD50Q92878 1312 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 FAM208BQ5VWN6 2430 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 IGHV1-18A0A0C4DH31 117 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 HPGDSO60760 199 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 ZNF737O75373 536 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 PRB4P10163 310 aaPredicted RBP0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 CXCL2P19875 107 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 CD40LGP29965 261 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 CCR2P41597 374 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 CDK9P50750 372 aaKnown RBP0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 MGAT3Q09327 533 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 ZNF705AQ6ZN79 300 aaPredicted RBP0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 TMEM86AQ8N2M4 240 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 OR7G1Q8NGA0 311 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 RNASE6Q93091 150 aaKnown RBP0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 CCL13Q99616 98 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 TMEM109Q9BVC6 243 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 MS4A6AQ9H2W1 248 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 WDR54Q9H977 334 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 EURLQ9NYK6 297 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 NBEAQ8NFP9 2946 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 BOD1L1Q8NFC6 3051 aa0.72□□□□□ -2.29
RNU6-48P-201ENST00000384161 SMARCA4P51532 1647 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 MED1Q15648 1581 aaPredicted RBP0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 IGKV3-7A0A075B6H7 116 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 H7C2G1 150 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 ATP8B1O43520 1251 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 CIAO1O76071 339 aa0.71□□□□□ -2.3
RNU6-48P-201ENST00000384161 APOMO95445 188 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms