RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 SRP19P09132 144 aaKnown RBP16.54■□□□□ 0.24
TGFBR1-201ENST00000374990 HCP5Q6MZN7 132 aa16.54■□□□□ 0.24
TGFBR1-201ENST00000374990 CDC42EP3Q9UKI2 254 aa16.54■□□□□ 0.24
TGFBR1-201ENST00000374990 IGHV3-72A0A0B4J1Y9 119 aa16.53■□□□□ 0.24
TGFBR1-201ENST00000374990 PGPA6NDG6 321 aa16.53■□□□□ 0.24
TGFBR1-201ENST00000374990 OR4A5Q8NH83 315 aa16.53■□□□□ 0.24
TGFBR1-201ENST00000374990 TM4SF5O14894 197 aa16.53■□□□□ 0.24
TGFBR1-201ENST00000374990 ID3Q02535 119 aa16.53■□□□□ 0.24
TGFBR1-201ENST00000374990 VWA1Q6PCB0 445 aa16.53■□□□□ 0.24
TGFBR1-201ENST00000374990 WDYHV1Q96HA8 205 aa16.53■□□□□ 0.24
TGFBR1-201ENST00000374990 TGIF2-C20orf24A0A0A6YYL0 155 aa16.53■□□□□ 0.24
TGFBR1-201ENST00000374990 DIRC3C9JPN6 131 aa16.53■□□□□ 0.24
TGFBR1-201ENST00000374990 RNF151Q2KHN1 245 aa16.52■□□□□ 0.24
TGFBR1-201ENST00000374990 VN1R17PQ8TDU5 208 aa16.52■□□□□ 0.24
TGFBR1-201ENST00000374990 SLC25A33Q9BSK2 321 aa16.52■□□□□ 0.24
TGFBR1-201ENST00000374990 PKDREJQ9NTG1 2253 aa16.52■□□□□ 0.24
TGFBR1-201ENST00000374990 PROB1E7EW31 1015 aa16.52■□□□□ 0.24
TGFBR1-201ENST00000374990 NPCDR1Q9BY65 106 aa16.52■□□□□ 0.24
TGFBR1-201ENST00000374990 DEPPQ9NTK1 212 aa16.52■□□□□ 0.24
TGFBR1-201ENST00000374990 C9orf172C9J069 976 aa16.52■□□□□ 0.24
TGFBR1-201ENST00000374990 F5H697 171 aa16.52■□□□□ 0.24
TGFBR1-201ENST00000374990 CLPSP04118 112 aa16.52■□□□□ 0.24
TGFBR1-201ENST00000374990 GTF2H5Q6ZYL4 71 aa16.52■□□□□ 0.24
TGFBR1-201ENST00000374990 PRR7Q8TB68 274 aa16.52■□□□□ 0.24
TGFBR1-201ENST00000374990 MESP1Q9BRJ9 268 aa16.52■□□□□ 0.24
TGFBR1-201ENST00000374990 LCN2P80188 198 aa16.52■□□□□ 0.23
TGFBR1-201ENST00000374990 C18orf12Q96KH6 178 aa16.52■□□□□ 0.23
TGFBR1-201ENST00000374990 PAM16Q9Y3D7 125 aa16.52■□□□□ 0.23
TGFBR1-201ENST00000374990 FNDC1Q4ZHG4 1894 aaPredicted RBP16.52■□□□□ 0.23
TGFBR1-201ENST00000374990 ACAA1P09110 424 aaPredicted RBP16.52■□□□□ 0.23
TGFBR1-201ENST00000374990 TSC2P49815 1807 aa16.52■□□□□ 0.23
TGFBR1-201ENST00000374990 ABCA1O95477 2261 aa16.52■□□□□ 0.23
TGFBR1-201ENST00000374990 A0A0A6YYD4 124 aa16.51■□□□□ 0.23
TGFBR1-201ENST00000374990 IGHV3-21A0A0B4J1V1 117 aa16.51■□□□□ 0.23
TGFBR1-201ENST00000374990 IGHV2OR16-5A0A0B4J2B6 119 aa16.51■□□□□ 0.23
TGFBR1-201ENST00000374990 BMPR1BO00238 502 aa16.51■□□□□ 0.23
TGFBR1-201ENST00000374990 IGHV1-2P23083 117 aa16.51■□□□□ 0.23
TGFBR1-201ENST00000374990 GCHFRP30047 84 aa16.51■□□□□ 0.23
TGFBR1-201ENST00000374990 STPG3Q8N7X2 389 aa16.51■□□□□ 0.23
TGFBR1-201ENST00000374990 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.51■□□□□ 0.23
TGFBR1-201ENST00000374990 DNASE2O00115 360 aaPredicted RBP16.51■□□□□ 0.23
TGFBR1-201ENST00000374990 RBM14Q96PK6 669 aaKnown RBP16.51■□□□□ 0.23
TGFBR1-201ENST00000374990 UBTD1Q9HAC8 227 aa16.51■□□□□ 0.23
TGFBR1-201ENST00000374990 DOPEY2Q9Y3R5 2298 aa16.51■□□□□ 0.23
TGFBR1-201ENST00000374990 TRGC1P0CF51 173 aa16.51■□□□□ 0.23
TGFBR1-201ENST00000374990 WDR25Q64LD2 544 aaPredicted RBP16.51■□□□□ 0.23
TGFBR1-201ENST00000374990 LEAP2Q969E1 77 aa16.51■□□□□ 0.23
TGFBR1-201ENST00000374990 PTPRDP23468 1912 aa16.51■□□□□ 0.23
TGFBR1-201ENST00000374990 TRAV30A0A087WSZ9 112 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 A0A087WWC5 75 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 C17orf98A8MV24 154 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 B9A039 149 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 OR13A1Q8NGR1 328 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 HSPB9Q9BQS6 159 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 NAGKQ9UJ70 344 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 UFC1Q9Y3C8 167 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 ATRAIDQ6UW56 229 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 ZNF525Q8N782 197 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 TMEM116Q8NCL8 245 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 NABP1Q96AH0 204 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 E9PQ18 207 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 CRYBB3P26998 211 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 TRBV9A0A0B4J1U6 114 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 PPIAL4CA0A0B4J2A2 164 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 PPIAL4GP0DN37 164 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 SRSF7Q16629 238 aaKnown RBP eCLIP16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 TMEM97Q5BJF2 176 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 CLEC7AQ9BXN2 247 aa16.5■□□□□ 0.23
TGFBR1-201ENST00000374990 IGKV1D-13A0A0B4J2D9 117 aa16.49■□□□□ 0.23
TGFBR1-201ENST00000374990 FAM106CPP0CH98 169 aa16.49■□□□□ 0.23
TGFBR1-201ENST00000374990 IGKV1-13P0DP09 117 aa16.49■□□□□ 0.23
TGFBR1-201ENST00000374990 CD99P14209 185 aa16.49■□□□□ 0.23
TGFBR1-201ENST00000374990 PRNTQ86SH4 94 aa16.49■□□□□ 0.23
TGFBR1-201ENST00000374990 VKORC1L1Q8N0U8 176 aa16.49■□□□□ 0.23
TGFBR1-201ENST00000374990 NUBP1P53384 320 aa16.49■□□□□ 0.23
TGFBR1-201ENST00000374990 SLC35B1P78383 322 aa16.49■□□□□ 0.23
TGFBR1-201ENST00000374990 PET117Q6UWS5 81 aa16.49■□□□□ 0.23
TGFBR1-201ENST00000374990 KLHDC3Q9BQ90 382 aa16.49■□□□□ 0.23
TGFBR1-201ENST00000374990 ECSCRQ19T08 205 aa16.49■□□□□ 0.23
TGFBR1-201ENST00000374990 ACSF3Q4G176 576 aaPredicted RBP16.49■□□□□ 0.23
TGFBR1-201ENST00000374990 HILPDAQ9Y5L2 63 aa16.49■□□□□ 0.23
TGFBR1-201ENST00000374990 KBTBD11-OT1A0A1B0GTJ5 212 aa16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 HOXA4Q00056 320 aaPredicted RBP16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 MEF2CQ06413 473 aaPredicted RBP16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 NPIPB3Q92617 1050 aa16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 RALYQ9UKM9 306 aaKnown RBP16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 PLAUP00749 431 aa16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 DPF1Q92782 380 aa16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 RPL39P5Q59GN2 51 aa16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 MRPL18Q9H0U6 180 aaKnown RBP16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 IGKV1D-8A0A087WSZ0 117 aa16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 IGHV1-69-2A0A0G2JMI3 117 aa16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 SS18L1O75177 396 aaPredicted RBP16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 EIF3GO75821 320 aaKnown RBP eCLIP16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 CA2P00918 260 aa16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 TMPRSS3P57727 454 aa16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 CD40P25942 277 aa16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 ZNF137PP52743 207 aa16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 MFAP4P55083 255 aa16.48■□□□□ 0.23
TGFBR1-201ENST00000374990 PCSK4Q6UW60 755 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms