RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 BVES-AS1Q5T3Y7 98 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 MRPL54Q6P161 138 aaKnown RBP17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 SPATA12Q7Z6I5 190 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 DEFB125Q8N687 156 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 FAM181BA6NEQ2 426 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 PSG9Q00887 426 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 IGFBP7Q16270 282 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 ZNF718Q3SXZ3 478 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 ZC2HC1AQ96GY0 325 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 WDFY4Q6ZS81 3184 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 SELENOVP59797 346 aa17.18■□□□□ 0.34
TMEFF1-201ENST00000374879 FXYD3Q14802 87 aa17.18■□□□□ 0.34
TMEFF1-201ENST00000374879 ZNF488Q96MN9 340 aa17.18■□□□□ 0.34
TMEFF1-201ENST00000374879 ZNF391Q9UJN7 358 aa17.18■□□□□ 0.34
TMEFF1-201ENST00000374879 STAG3L2P0CL84 134 aa17.18■□□□□ 0.34
TMEFF1-201ENST00000374879 STAG3L3P0CL85 134 aa17.18■□□□□ 0.34
TMEFF1-201ENST00000374879 KRTAP27-1Q3LI81 207 aa17.18■□□□□ 0.34
TMEFF1-201ENST00000374879 DRAM1Q8N682 238 aa17.18■□□□□ 0.34
TMEFF1-201ENST00000374879 RNASE7Q9H1E1 156 aaKnown RBP17.18■□□□□ 0.34
TMEFF1-201ENST00000374879 RAC2P15153 192 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 TBR1Q16650 682 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 OR8B3Q8NGG8 313 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 C18orf32Q8TCD1 76 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 OR8B2Q96RD0 313 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 WDR83OSQ9Y284 106 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 EML6Q6ZMW3 1958 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 TRAPPC2LH3BP13 241 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 ZFAND5O76080 213 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 ZNF816Q0VGE8 651 aaPredicted RBP17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 GP6Q9HCN6 339 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 MRPS17Q9Y2R5 130 aaKnown RBP17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 TRAV24A0A0B4J272 114 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 SYNGR1O43759 233 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 CXorf1O96002 111 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 GATA2P23769 480 aaPredicted RBP17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 CA7P43166 264 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 PRAMEF20Q5VT98 475 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 FAM71F2Q6NXP2 309 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 KIR3DL3Q8N743 410 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 SCCPDHQ8NBX0 429 aa17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.17■□□□□ 0.34
TMEFF1-201ENST00000374879 TRAV8-6A0A0B4J262 113 aa17.16■□□□□ 0.34
TMEFF1-201ENST00000374879 C9JCJ5 164 aa17.16■□□□□ 0.34
TMEFF1-201ENST00000374879 AMY1AP04745 511 aa17.16■□□□□ 0.34
TMEFF1-201ENST00000374879 LINC00869P0C866 280 aa17.16■□□□□ 0.34
TMEFF1-201ENST00000374879 CD1BP29016 333 aa17.16■□□□□ 0.34
TMEFF1-201ENST00000374879 SSTR5P35346 364 aa17.16■□□□□ 0.34
TMEFF1-201ENST00000374879 DOLPP1Q86YN1 238 aa17.16■□□□□ 0.34
TMEFF1-201ENST00000374879 TRBV6-6A0A0A6YYG2 114 aa17.16■□□□□ 0.34
TMEFF1-201ENST00000374879 M0R2Z0 102 aa17.16■□□□□ 0.34
TMEFF1-201ENST00000374879 APCSP02743 223 aa17.16■□□□□ 0.34
TMEFF1-201ENST00000374879 UBE2G1P62253 170 aa17.16■□□□□ 0.34
TMEFF1-201ENST00000374879 MKXQ8IYA7 352 aa17.16■□□□□ 0.34
TMEFF1-201ENST00000374879 COL6A3P12111 3177 aa17.15■□□□□ 0.34
TMEFF1-201ENST00000374879 TRGV10A0A0A0MS01 117 aa17.15■□□□□ 0.34
TMEFF1-201ENST00000374879 C2orf70A6NJV1 201 aa17.15■□□□□ 0.34
TMEFF1-201ENST00000374879 HSBP1O75506 76 aa17.15■□□□□ 0.34
TMEFF1-201ENST00000374879 ARR3P36575 388 aa17.15■□□□□ 0.34
TMEFF1-201ENST00000374879 ZXDAP98168 799 aa17.15■□□□□ 0.34
TMEFF1-201ENST00000374879 TMEM38BQ9NVV0 291 aa17.15■□□□□ 0.34
TMEFF1-201ENST00000374879 RARRES3Q9UL19 164 aa17.15■□□□□ 0.34
TMEFF1-201ENST00000374879 HLA-DQA1P01909 254 aa17.15■□□□□ 0.34
TMEFF1-201ENST00000374879 NTF4P34130 210 aa17.15■□□□□ 0.34
TMEFF1-201ENST00000374879 SLAQ13239 276 aa17.15■□□□□ 0.34
TMEFF1-201ENST00000374879 GUSBP11Q6P575 273 aa17.15■□□□□ 0.34
TMEFF1-201ENST00000374879 C16orf54Q6UWD8 224 aa17.15■□□□□ 0.34
TMEFF1-201ENST00000374879 LY96Q9Y6Y9 160 aa17.15■□□□□ 0.34
TMEFF1-201ENST00000374879 KIAA1549Q9HCM3 1950 aa17.15■□□□□ 0.34
TMEFF1-201ENST00000374879 P0C879 139 aa17.14■□□□□ 0.33
TMEFF1-201ENST00000374879 NPY1RP25929 384 aa17.14■□□□□ 0.33
TMEFF1-201ENST00000374879 OR2H1Q9GZK4 316 aa17.14■□□□□ 0.33
TMEFF1-201ENST00000374879 M0R1X1 148 aa17.14■□□□□ 0.33
TMEFF1-201ENST00000374879 RBMXL2O75526 392 aaKnown RBP17.13■□□□□ 0.33
TMEFF1-201ENST00000374879 SMIM21Q3B7S5 101 aa17.13■□□□□ 0.33
TMEFF1-201ENST00000374879 MIC13Q5XKP0 118 aa17.13■□□□□ 0.33
TMEFF1-201ENST00000374879 SPACA9Q96E40 222 aaPredicted RBP17.13■□□□□ 0.33
TMEFF1-201ENST00000374879 TECRQ9NZ01 308 aaKnown RBP17.13■□□□□ 0.33
TMEFF1-201ENST00000374879 A0A1W2PQM1 296 aa17.13■□□□□ 0.33
TMEFF1-201ENST00000374879 C15orf62A8K5M9 175 aa17.13■□□□□ 0.33
TMEFF1-201ENST00000374879 NPIPB11E5RHQ5 1161 aa17.13■□□□□ 0.33
TMEFF1-201ENST00000374879 GCHFRP30047 84 aa17.13■□□□□ 0.33
TMEFF1-201ENST00000374879 COX19Q49B96 90 aa17.13■□□□□ 0.33
TMEFF1-201ENST00000374879 CENPWQ5EE01 88 aa17.13■□□□□ 0.33
TMEFF1-201ENST00000374879 OR2Y1Q8NGV0 311 aa17.13■□□□□ 0.33
TMEFF1-201ENST00000374879 DEFB126Q9BYW3 111 aa17.13■□□□□ 0.33
TMEFF1-201ENST00000374879 PRDM6Q9NQX0 595 aa17.13■□□□□ 0.33
TMEFF1-201ENST00000374879 DLL3Q9NYJ7 618 aa17.13■□□□□ 0.33
TMEFF1-201ENST00000374879 CELSR3Q9NYQ7 3312 aa17.12■□□□□ 0.33
TMEFF1-201ENST00000374879 FREM2Q5SZK8 3169 aa17.12■□□□□ 0.33
TMEFF1-201ENST00000374879 VAMP5O95183 116 aa17.12■□□□□ 0.33
TMEFF1-201ENST00000374879 RPL30P62888 115 aaKnown RBP17.12■□□□□ 0.33
TMEFF1-201ENST00000374879 C11orf52Q96A22 123 aa17.12■□□□□ 0.33
TMEFF1-201ENST00000374879 SPSB4Q96A44 273 aa17.12■□□□□ 0.33
TMEFF1-201ENST00000374879 AKIRIN1Q9H9L7 192 aaPredicted RBP17.12■□□□□ 0.33
TMEFF1-201ENST00000374879 FOXH1O75593 365 aa17.12■□□□□ 0.33
TMEFF1-201ENST00000374879 PQLC2Q6ZP29 291 aa17.12■□□□□ 0.33
TMEFF1-201ENST00000374879 FADS6Q8N9I5 356 aa17.12■□□□□ 0.33
TMEFF1-201ENST00000374879 USF3Q68DE3 2245 aa17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 hDV102S1A0JD36 115 aa17.11■□□□□ 0.33
TMEFF1-201ENST00000374879 IGLC1P0CG04 106 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms