RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 BRWD1-AS2P59051 145 aa10.31□□□□□ -0.76
CXCL12-202ENST00000374426 ZNF57Q68EA5 555 aaPredicted RBP10.31□□□□□ -0.76
CXCL12-202ENST00000374426 UXS1Q8NBZ7 420 aa10.31□□□□□ -0.76
CXCL12-202ENST00000374426 OR2A7Q96R45 310 aa10.31□□□□□ -0.76
CXCL12-202ENST00000374426 GGTLC1Q9BX51 225 aa10.31□□□□□ -0.76
CXCL12-202ENST00000374426 SLC2A9Q9NRM0 540 aa10.31□□□□□ -0.76
CXCL12-202ENST00000374426 MRPS7Q9Y2R9 242 aaKnown RBP10.31□□□□□ -0.76
CXCL12-202ENST00000374426 OR2W1Q9Y3N9 320 aa10.31□□□□□ -0.76
CXCL12-202ENST00000374426 DNAH10Q8IVF4 4471 aa10.31□□□□□ -0.76
CXCL12-202ENST00000374426 HERC2O95714 4834 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 TRAV1-2A0A0B4J238 106 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 IGKV1D-13A0A0B4J2D9 117 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 ZNF320A2RRD8 509 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 DPPA5A6NC42 116 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 METTL21EPA6NDL7 271 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 ERICH4A6NGS2 130 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 PDCD5O14737 125 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 SCAF4O95104 1147 aaKnown RBP10.3□□□□□ -0.76
CXCL12-202ENST00000374426 CRYGCP07315 174 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 ZNF735P0CB33 412 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 IGKV1-13P0DP09 117 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 CD36P16671 472 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 RPL27AP46776 148 aaKnown RBP10.3□□□□□ -0.76
CXCL12-202ENST00000374426 EIF4EBP1Q13541 118 aaPredicted RBP10.3□□□□□ -0.76
CXCL12-202ENST00000374426 SSX1Q16384 188 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 KLK9Q2XQG4 91 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 PUSL1Q8N0Z8 303 aaKnown RBP10.3□□□□□ -0.76
CXCL12-202ENST00000374426 OR52B4Q8NGK2 314 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 TMEM167AQ8TBQ9 72 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 FYTTD1Q96QD9 318 aaKnown RBP10.3□□□□□ -0.76
CXCL12-202ENST00000374426 ST6GALNAC5Q9BVH7 336 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 CCDC90BQ9GZT6 254 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 KLK9Q9UKQ9 250 aa10.3□□□□□ -0.76
CXCL12-202ENST00000374426 LOC102724200A0A096LPH7 203 aaPredicted RBP10.29□□□□□ -0.76
CXCL12-202ENST00000374426 LY6G6CO95867 125 aa10.29□□□□□ -0.76
CXCL12-202ENST00000374426 CTRB1P17538 263 aa10.29□□□□□ -0.76
CXCL12-202ENST00000374426 CRHBPP24387 322 aa10.29□□□□□ -0.76
CXCL12-202ENST00000374426 PSMB6P28072 239 aa10.29□□□□□ -0.76
CXCL12-202ENST00000374426 AQP4P55087 323 aa10.29□□□□□ -0.76
CXCL12-202ENST00000374426 EWSR1Q01844 656 aaKnown RBP eCLIP10.29□□□□□ -0.76
CXCL12-202ENST00000374426 CDNFQ49AH0 187 aa10.29□□□□□ -0.76
CXCL12-202ENST00000374426 FAM106AQ4KMX7 169 aa10.29□□□□□ -0.76
CXCL12-202ENST00000374426 CTRB2Q6GPI1 263 aa10.29□□□□□ -0.76
CXCL12-202ENST00000374426 BTNL8Q6UX41 500 aa10.29□□□□□ -0.76
CXCL12-202ENST00000374426 PRSS48Q7RTY5 328 aa10.29□□□□□ -0.76
CXCL12-202ENST00000374426 NR2C2APQ86WQ0 139 aa10.29□□□□□ -0.76
CXCL12-202ENST00000374426 OR4S2Q8NH73 311 aa10.29□□□□□ -0.76
CXCL12-202ENST00000374426 VSTM2AQ8TAG5 236 aa10.29□□□□□ -0.76
CXCL12-202ENST00000374426 KRTAP17-1Q9BYP8 105 aa10.29□□□□□ -0.76
CXCL12-202ENST00000374426 ATG5Q9H1Y0 275 aa10.29□□□□□ -0.76
CXCL12-202ENST00000374426 SPATA2Q9UM82 520 aa10.29□□□□□ -0.76
CXCL12-202ENST00000374426 CXorf65A6NEN9 183 aa10.28□□□□□ -0.76
CXCL12-202ENST00000374426 MFSD2BA6NFX1 497 aa10.28□□□□□ -0.76
CXCL12-202ENST00000374426 CGB1A6NKQ9 187 aa10.28□□□□□ -0.76
CXCL12-202ENST00000374426 SLC22A5O76082 557 aa10.28□□□□□ -0.76
CXCL12-202ENST00000374426 CTXN2P0C2S0 81 aa10.28□□□□□ -0.76
CXCL12-202ENST00000374426 MYOD1P15172 320 aa10.28□□□□□ -0.76
CXCL12-202ENST00000374426 MAS1LP35410 378 aa10.28□□□□□ -0.76
CXCL12-202ENST00000374426 PMS2P11Q13670 270 aa10.28□□□□□ -0.76
CXCL12-202ENST00000374426 ARL6IP1Q15041 203 aa10.28□□□□□ -0.76
CXCL12-202ENST00000374426 ANKRD55Q3KP44 614 aa10.28□□□□□ -0.76
CXCL12-202ENST00000374426 TM4SF20Q53R12 229 aa10.28□□□□□ -0.76
CXCL12-202ENST00000374426 HACD4Q5VWC8 232 aa10.28□□□□□ -0.76
CXCL12-202ENST00000374426 OR4A47Q6IF82 309 aa10.28□□□□□ -0.76
CXCL12-202ENST00000374426 UNQ9165/PRO28630Q6UXU0 137 aa10.28□□□□□ -0.76
CXCL12-202ENST00000374426 TCTEX1D2Q8WW35 142 aa10.28□□□□□ -0.76
CXCL12-202ENST00000374426 EEF1AKMT3Q96AZ1 226 aa10.28□□□□□ -0.76
CXCL12-202ENST00000374426 HSD17B10Q99714 261 aaKnown RBP10.28□□□□□ -0.76
CXCL12-202ENST00000374426 IGLV11-55A0A075B6I3 123 aa10.27□□□□□ -0.77
CXCL12-202ENST00000374426 A0A0J9YWU9 116 aa10.27□□□□□ -0.77
CXCL12-202ENST00000374426 DHFRP00374 187 aa10.27□□□□□ -0.77
CXCL12-202ENST00000374426 REG1AP05451 166 aa10.27□□□□□ -0.77
CXCL12-202ENST00000374426 CLEC3BP05452 202 aa10.27□□□□□ -0.77
CXCL12-202ENST00000374426 C8orf88P0DMB2 117 aa10.27□□□□□ -0.77
CXCL12-202ENST00000374426 RAB3BP20337 219 aa10.27□□□□□ -0.77
CXCL12-202ENST00000374426 RPL8P62917 257 aaKnown RBP10.27□□□□□ -0.77
CXCL12-202ENST00000374426 SSX9Q7RTT3 188 aa10.27□□□□□ -0.77
CXCL12-202ENST00000374426 MFSD4AQ8N468 514 aa10.27□□□□□ -0.77
CXCL12-202ENST00000374426 NUDCD2Q8WVJ2 157 aa10.27□□□□□ -0.77
CXCL12-202ENST00000374426 GPHA2Q96T91 129 aa10.27□□□□□ -0.77
CXCL12-202ENST00000374426 DCSTAMPQ9H295 470 aa10.27□□□□□ -0.77
CXCL12-202ENST00000374426 TAS2R8Q9NYW2 309 aa10.27□□□□□ -0.77
CXCL12-202ENST00000374426 TRBV7-1A0A0A6YYK4 115 aa10.26□□□□□ -0.77
CXCL12-202ENST00000374426 TRAV25A0A0B4J276 109 aa10.26□□□□□ -0.77
CXCL12-202ENST00000374426 NUPR2A6NF83 97 aa10.26□□□□□ -0.77
CXCL12-202ENST00000374426 TMEM235A6NFC5 223 aa10.26□□□□□ -0.77
CXCL12-202ENST00000374426 HIST1H1BP16401 226 aaKnown RBP10.26□□□□□ -0.77
CXCL12-202ENST00000374426 MYL9P24844 172 aa10.26□□□□□ -0.77
CXCL12-202ENST00000374426 TNFRSF9Q07011 255 aa10.26□□□□□ -0.77
CXCL12-202ENST00000374426 TBCEQ15813 527 aaPredicted RBP10.26□□□□□ -0.77
CXCL12-202ENST00000374426 CNIH2Q6PI25 160 aa10.26□□□□□ -0.77
CXCL12-202ENST00000374426 WFDC3Q8IUB2 231 aa10.26□□□□□ -0.77
CXCL12-202ENST00000374426 OR1L6Q8NGR2 347 aa10.26□□□□□ -0.77
CXCL12-202ENST00000374426 NRG4Q8WWG1 115 aa10.26□□□□□ -0.77
CXCL12-202ENST00000374426 MARC2Q969Z3 335 aa10.26□□□□□ -0.77
CXCL12-202ENST00000374426 NDUFB11Q9NX14 153 aa10.26□□□□□ -0.77
CXCL12-202ENST00000374426 IGHV3-35A0A0C4DH35 117 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 TRDV1A0A1B0GX56 115 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 SMIM30A4D0T7 59 aa10.25□□□□□ -0.77
CXCL12-202ENST00000374426 SSX5O60225 188 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms