RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 ATOH7Q8N100 152 aa18.85■□□□□ 0.61
TM9SF3-201ENST00000371142 TEX29Q8N6K0 151 aa18.85■□□□□ 0.61
TM9SF3-201ENST00000371142 COL4A5P29400 1685 aa18.84■□□□□ 0.61
TM9SF3-201ENST00000371142 PPP1R17O96001 155 aa18.84■□□□□ 0.61
TM9SF3-201ENST00000371142 IFI6P09912 130 aa18.84■□□□□ 0.61
TM9SF3-201ENST00000371142 IGLV3-21P80748 117 aaPredicted RBP18.84■□□□□ 0.61
TM9SF3-201ENST00000371142 C10orf128Q5T292 105 aa18.84■□□□□ 0.61
TM9SF3-201ENST00000371142 SFRP2Q96HF1 295 aa18.84■□□□□ 0.61
TM9SF3-201ENST00000371142 B9A039 149 aa18.83■□□□□ 0.61
TM9SF3-201ENST00000371142 SOD3P08294 240 aa18.83■□□□□ 0.61
TM9SF3-201ENST00000371142 POC1AQ8NBT0 407 aa18.83■□□□□ 0.61
TM9SF3-201ENST00000371142 LTBP4Q8N2S1 1624 aa18.83■□□□□ 0.61
TM9SF3-201ENST00000371142 DANCRP0C864 163 aa18.83■□□□□ 0.61
TM9SF3-201ENST00000371142 ANKRD31Q8N7Z5 1873 aa18.83■□□□□ 0.61
TM9SF3-201ENST00000371142 POLR2AP24928 1970 aaKnown RBP18.83■□□□□ 0.6
TM9SF3-201ENST00000371142 A0A1W2PR77 199 aa18.83■□□□□ 0.6
TM9SF3-201ENST00000371142 GCHFRP30047 84 aa18.83■□□□□ 0.6
TM9SF3-201ENST00000371142 FAM27E3Q08E93 113 aa18.83■□□□□ 0.6
TM9SF3-201ENST00000371142 ZXDCQ2QGD7 858 aaPredicted RBP18.83■□□□□ 0.6
TM9SF3-201ENST00000371142 Q6ZT83 130 aa18.83■□□□□ 0.6
TM9SF3-201ENST00000371142 OR4D5Q8NGN0 318 aa18.83■□□□□ 0.6
TM9SF3-201ENST00000371142 ERVH48-1M5A8F1 160 aa18.83■□□□□ 0.6
TM9SF3-201ENST00000371142 PF4P02776 101 aa18.83■□□□□ 0.6
TM9SF3-201ENST00000371142 FOLR2P14207 255 aa18.83■□□□□ 0.6
TM9SF3-201ENST00000371142 GCSAMLQ5JQS6 135 aa18.83■□□□□ 0.6
TM9SF3-201ENST00000371142 FAM201AQ5SY85 155 aa18.83■□□□□ 0.6
TM9SF3-201ENST00000371142 MRPL32Q9BYC8 188 aaKnown RBP18.83■□□□□ 0.6
TM9SF3-201ENST00000371142 TSPOP30536 169 aa18.82■□□□□ 0.6
TM9SF3-201ENST00000371142 COL24A1Q17RW2 1714 aa18.82■□□□□ 0.6
TM9SF3-201ENST00000371142 SNRPD3P62318 126 aaKnown RBP18.82■□□□□ 0.6
TM9SF3-201ENST00000371142 FAM181AQ8N9Y4 354 aa18.82■□□□□ 0.6
TM9SF3-201ENST00000371142 ELOVL5Q9NYP7 299 aa18.82■□□□□ 0.6
TM9SF3-201ENST00000371142 LCN2P80188 198 aa18.82■□□□□ 0.6
TM9SF3-201ENST00000371142 TCF24Q7RTU0 167 aa18.82■□□□□ 0.6
TM9SF3-201ENST00000371142 OR10AG1Q8NH19 301 aa18.82■□□□□ 0.6
TM9SF3-201ENST00000371142 SCARF2Q96GP6 870 aaPredicted RBP18.82■□□□□ 0.6
TM9SF3-201ENST00000371142 C1QL2Q7Z5L3 287 aa18.82■□□□□ 0.6
TM9SF3-201ENST00000371142 ATAD5Q96QE3 1844 aa18.81■□□□□ 0.6
TM9SF3-201ENST00000371142 C9JCJ5 164 aa18.81■□□□□ 0.6
TM9SF3-201ENST00000371142 TRGV3P03979 118 aa18.81■□□□□ 0.6
TM9SF3-201ENST00000371142 FAM159AQ6UWV7 190 aa18.81■□□□□ 0.6
TM9SF3-201ENST00000371142 TMEM262E9PQX1 116 aa18.81■□□□□ 0.6
TM9SF3-201ENST00000371142 PLP1P60201 277 aa18.81■□□□□ 0.6
TM9SF3-201ENST00000371142 CENPWQ5EE01 88 aa18.81■□□□□ 0.6
TM9SF3-201ENST00000371142 KLRB1Q12918 225 aa18.81■□□□□ 0.6
TM9SF3-201ENST00000371142 TRGC1P0CF51 173 aa18.81■□□□□ 0.6
TM9SF3-201ENST00000371142 APOBEC3AP31941 199 aaPredicted RBP18.81■□□□□ 0.6
TM9SF3-201ENST00000371142 CYP2G1PQ6ZSU1 146 aa18.81■□□□□ 0.6
TM9SF3-201ENST00000371142 CHRNA10Q9GZZ6 450 aa18.81■□□□□ 0.6
TM9SF3-201ENST00000371142 FOXH1O75593 365 aa18.81■□□□□ 0.6
TM9SF3-201ENST00000371142 UCP3P55916 312 aa18.81■□□□□ 0.6
TM9SF3-201ENST00000371142 TRBV20OR9-2A0A075B6H5 130 aa18.8■□□□□ 0.6
TM9SF3-201ENST00000371142 IL6RP08887 468 aaPredicted RBP18.8■□□□□ 0.6
TM9SF3-201ENST00000371142 ACP7Q6ZNF0 438 aa18.8■□□□□ 0.6
TM9SF3-201ENST00000371142 BIVMQ86UB2 503 aa18.8■□□□□ 0.6
TM9SF3-201ENST00000371142 NPFFO15130 113 aa18.8■□□□□ 0.6
TM9SF3-201ENST00000371142 ZNF703Q9H7S9 590 aaPredicted RBP18.8■□□□□ 0.6
TM9SF3-201ENST00000371142 UQCR10Q9UDW1 63 aa18.8■□□□□ 0.6
TM9SF3-201ENST00000371142 CHCHD2Q9Y6H1 151 aaPredicted RBP18.8■□□□□ 0.6
TM9SF3-201ENST00000371142 K7ERU9 68 aa18.8■□□□□ 0.6
TM9SF3-201ENST00000371142 CIRBPQ14011 172 aaKnown RBP18.8■□□□□ 0.6
TM9SF3-201ENST00000371142 SLC25A34Q6PIV7 304 aa18.8■□□□□ 0.6
TM9SF3-201ENST00000371142 C12orf54Q6X4T0 127 aa18.8■□□□□ 0.6
TM9SF3-201ENST00000371142 GEMIN7Q9H840 131 aaKnown RBP18.8■□□□□ 0.6
TM9SF3-201ENST00000371142 ICAM4Q14773 271 aa18.8■□□□□ 0.6
TM9SF3-201ENST00000371142 TMEM106BQ9NUM4 274 aa18.8■□□□□ 0.6
TM9SF3-201ENST00000371142 LOC390937A0A1W2PQ73 354 aa18.79■□□□□ 0.6
TM9SF3-201ENST00000371142 LNP1A1A4G5 178 aa18.79■□□□□ 0.6
TM9SF3-201ENST00000371142 HLA-DRB1P01911 266 aa18.79■□□□□ 0.6
TM9SF3-201ENST00000371142 C19orf24Q9BVV8 132 aa18.79■□□□□ 0.6
TM9SF3-201ENST00000371142 PSMB11A5LHX3 300 aa18.79■□□□□ 0.6
TM9SF3-201ENST00000371142 IGKV1D-43A0A0B4J1Z2 117 aa18.79■□□□□ 0.6
TM9SF3-201ENST00000371142 ZNF708P17019 499 aa18.79■□□□□ 0.6
TM9SF3-201ENST00000371142 FBXL15Q9H469 300 aa18.79■□□□□ 0.6
TM9SF3-201ENST00000371142 C2orf68Q2NKX9 166 aa18.78■□□□□ 0.6
TM9SF3-201ENST00000371142 KIR2DL4Q99706 377 aa18.78■□□□□ 0.6
TM9SF3-201ENST00000371142 LINC00470Q9BZP3 86 aa18.78■□□□□ 0.6
TM9SF3-201ENST00000371142 BEX4Q9NWD9 120 aaPredicted RBP18.78■□□□□ 0.6
TM9SF3-201ENST00000371142 TMEM30BQ3MIR4 351 aa18.78■□□□□ 0.6
TM9SF3-201ENST00000371142 UNC13CQ8NB66 2214 aa18.78■□□□□ 0.6
TM9SF3-201ENST00000371142 KNTC1P50748 2209 aa18.78■□□□□ 0.6
TM9SF3-201ENST00000371142 A1L4Q6 167 aa18.78■□□□□ 0.6
TM9SF3-201ENST00000371142 CECR9P0C854 216 aa18.78■□□□□ 0.6
TM9SF3-201ENST00000371142 A0A0G2JMM0 328 aa18.78■□□□□ 0.6
TM9SF3-201ENST00000371142 A0A1W2PPB8 328 aa18.78■□□□□ 0.6
TM9SF3-201ENST00000371142 A0A1W2PRS3 328 aa18.78■□□□□ 0.6
TM9SF3-201ENST00000371142 KIR3DP1A8MWS1 328 aa18.78■□□□□ 0.6
TM9SF3-201ENST00000371142 PROB1E7EW31 1015 aa18.77■□□□□ 0.6
TM9SF3-201ENST00000371142 A0A0B4J293 547 aa18.77■□□□□ 0.6
TM9SF3-201ENST00000371142 RAB9AP51151 201 aa18.77■□□□□ 0.6
TM9SF3-201ENST00000371142 IGKV1D-33P01593 117 aa18.77■□□□□ 0.6
TM9SF3-201ENST00000371142 IGKV1-33P01594 117 aa18.77■□□□□ 0.6
TM9SF3-201ENST00000371142 TIMM23BQ5SRD1 257 aa18.77■□□□□ 0.6
TM9SF3-201ENST00000371142 C12orf77C9JDV5 145 aa18.77■□□□□ 0.59
TM9SF3-201ENST00000371142 FOXA2Q9Y261 457 aaPredicted RBP18.77■□□□□ 0.59
TM9SF3-201ENST00000371142 FAM216BQ8N7L0 139 aa18.76■□□□□ 0.59
TM9SF3-201ENST00000371142 CBLN1P23435 193 aa18.76■□□□□ 0.59
TM9SF3-201ENST00000371142 TFF3Q07654 80 aa18.76■□□□□ 0.59
TM9SF3-201ENST00000371142 LAIR2Q6ISS4 152 aa18.76■□□□□ 0.59
TM9SF3-201ENST00000371142 TMEM70Q9BUB7 260 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms