RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 NPIPB7O75200 414 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 SELENOHQ8IZQ5 122 aaKnown RBP13.5□□□□□ -0.25
PRDM1-203ENST00000369096 OR5AN1Q8NGI8 311 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 C11orf68Q9H3H3 251 aaKnown RBP13.5□□□□□ -0.25
PRDM1-203ENST00000369096 SHROOM3Q8TF72 1996 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 IGHV3-49A0A0A0MS15 119 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 H7C1H1 209 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 ZP4Q12836 540 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 MRPS18AQ9NVS2 196 aaKnown RBP13.5□□□□□ -0.25
PRDM1-203ENST00000369096 EVPLQ92817 2033 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 MOSP00540 346 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 C2orf68Q2NKX9 166 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 VKORC1L1Q8N0U8 176 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 OR9G1Q8NH87 305 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 C14orf144Q96I85 54 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 WNT10AQ9GZT5 417 aa13.5□□□□□ -0.25
PRDM1-203ENST00000369096 A0A1W2PPV9 198 aa13.49□□□□□ -0.25
PRDM1-203ENST00000369096 NPIPB11E5RHQ5 1161 aa13.49□□□□□ -0.25
PRDM1-203ENST00000369096 ASAH2BP0C7U1 165 aa13.49□□□□□ -0.25
PRDM1-203ENST00000369096 RPS11P62280 158 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRDM1-203ENST00000369096 CENPWQ5EE01 88 aa13.49□□□□□ -0.25
PRDM1-203ENST00000369096 CYB5R2Q6BCY4 276 aa13.49□□□□□ -0.25
PRDM1-203ENST00000369096 SH3BGRL3Q9H299 93 aa13.49□□□□□ -0.25
PRDM1-203ENST00000369096 TRBV9A0A0B4J1U6 114 aa13.49□□□□□ -0.25
PRDM1-203ENST00000369096 HOXA5P20719 270 aa13.49□□□□□ -0.25
PRDM1-203ENST00000369096 NUTF2P61970 127 aaKnown RBP13.49□□□□□ -0.25
PRDM1-203ENST00000369096 IFITM3Q01628 133 aa13.49□□□□□ -0.25
PRDM1-203ENST00000369096 EEF1AKMT3Q96AZ1 226 aa13.49□□□□□ -0.25
PRDM1-203ENST00000369096 CLDND2Q8NHS1 167 aa13.49□□□□□ -0.25
PRDM1-203ENST00000369096 PRR33A8MZF0 331 aa13.49□□□□□ -0.25
PRDM1-203ENST00000369096 ATP5J2P56134 94 aa13.49□□□□□ -0.25
PRDM1-203ENST00000369096 ICAM4Q14773 271 aa13.49□□□□□ -0.25
PRDM1-203ENST00000369096 AMELYQ99218 206 aa13.49□□□□□ -0.25
PRDM1-203ENST00000369096 IGHV3OR16-10A0A075B7F0 116 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 CD160O95971 181 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 GATAD1Q8WUU5 269 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 FAM90A10PA6NDY2 464 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 FAM90A18PA6NE21 464 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 FAM90A16PA6NEW6 464 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 FAM90A20PA6NIJ5 464 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 FAM90A8PA6NJQ4 464 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 FAM90A7PA6NKC0 464 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 FAM90A22PA8MWA6 464 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 FAM90A12PA8MX19 464 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 FAM90A5PA8MXJ8 464 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 FAM90A23PA8MXZ1 464 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 IGKV1D-16P01601 117 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 CELA2AP08217 269 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 FAM90A15PP0C7V4 464 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 FAM90A13PP0C7W8 464 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 FAM90A14PP0C7W9 464 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 FAM90A24PP0C7X0 464 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 DMRT1Q9Y5R6 373 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 SCN3AQ9NY46 2000 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 FGF11Q92914 225 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 C19orf24Q9BVV8 132 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 TUBA4BQ9H853 241 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 WBP1LQ9NX94 342 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 SFXN3Q9BWM7 321 aa13.48□□□□□ -0.25
PRDM1-203ENST00000369096 MUC21A0A0G2JKD1 596 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 MUC21A0A140T8X8 626 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 AHRRA9YTQ3 701 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 GCHFRP30047 84 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 FHITP49789 147 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 MUC21Q5SSG8 566 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 SCGB3A1Q96QR1 104 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 PIMREGQ9BSJ6 248 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 PNKDQ8N490 385 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 ST6GALNAC6Q969X2 333 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 AICDAQ9GZX7 198 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 CCDC88CQ9P219 2028 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 HTN3P15516 51 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 MRPL32Q9BYC8 188 aaKnown RBP13.47□□□□□ -0.25
PRDM1-203ENST00000369096 PLSCR2Q9NRY7 297 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 RGPD3A6NKT7 1758 aaPredicted RBP13.47□□□□□ -0.25
PRDM1-203ENST00000369096 RGPD4Q7Z3J3 1758 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 CNTFRP26992 372 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 RNASEH2CQ8TDP1 164 aaKnown RBP13.47□□□□□ -0.25
PRDM1-203ENST00000369096 MARVELD3Q96A59 401 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 CLEC7AQ9BXN2 247 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 PKIBQ9C010 78 aa13.47□□□□□ -0.25
PRDM1-203ENST00000369096 GLIPR1P48060 266 aa13.46□□□□□ -0.25
PRDM1-203ENST00000369096 Q5PR19 223 aa13.46□□□□□ -0.25
PRDM1-203ENST00000369096 TCF23Q7RTU1 214 aa13.46□□□□□ -0.25
PRDM1-203ENST00000369096 C2orf88Q9BSF0 95 aa13.46□□□□□ -0.25
PRDM1-203ENST00000369096 JPT1Q9UK76 154 aa13.46□□□□□ -0.25
PRDM1-203ENST00000369096 FER1L6Q2WGJ9 1857 aa13.46□□□□□ -0.25
PRDM1-203ENST00000369096 LOC105371242A0A075B767 164 aa13.46□□□□□ -0.25
PRDM1-203ENST00000369096 LINC00305Q7Z4B0 112 aa13.46□□□□□ -0.25
PRDM1-203ENST00000369096 NIT1Q86X76 327 aa13.46□□□□□ -0.25
PRDM1-203ENST00000369096 TMEM186Q96B77 213 aa13.46□□□□□ -0.25
PRDM1-203ENST00000369096 H3BRM9 83 aa13.46□□□□□ -0.25
PRDM1-203ENST00000369096 TSPAN7P41732 249 aa13.46□□□□□ -0.25
PRDM1-203ENST00000369096 SPCS1Q9Y6A9 102 aa13.46□□□□□ -0.25
PRDM1-203ENST00000369096 IFNL4K9M1U5 179 aa13.46□□□□□ -0.26
PRDM1-203ENST00000369096 NKX2-8O15522 239 aa13.46□□□□□ -0.26
PRDM1-203ENST00000369096 HIST1H2BAQ96A08 127 aa13.46□□□□□ -0.26
PRDM1-203ENST00000369096 TRBV5-5A0A0J9YX44 114 aa13.45□□□□□ -0.26
PRDM1-203ENST00000369096 ATP5LO75964 103 aa13.45□□□□□ -0.26
PRDM1-203ENST00000369096 APOHP02749 345 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms