RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 TCF19Q9Y242 345 aa13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 A0A1W2PN81 502 aa13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 C5orf63A6NC05 138 aa13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 FAM131CQ96AQ9 280 aa13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 ARRDC1-AS1Q9H2J1 176 aa13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 PEF1Q9UBV8 284 aaKnown RBP13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 SHANK1Q9Y566 2161 aa13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 IGHV5-10-1A0A0J9YXX1 117 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 CIDEAO60543 219 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 CCL4P13236 92 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 HES1Q14469 280 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 CDC42EP3Q9UKI2 254 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 TMEM210A6NLX4 147 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 CCL11P51671 97 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 OCC1Q8TAD7 63 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 AAMDCQ9H7C9 122 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 SH3BGRL2Q9UJC5 107 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 TCF20Q9UGU0 1960 aaKnown RBP13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 OR4C46A6NHA9 309 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 NMUP48645 174 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 NABP2Q9BQ15 211 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 COL25A1Q9BXS0 654 aaPredicted RBP13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 AMMECR1Q9Y4X0 333 aaPredicted RBP13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 PPIHO43447 177 aaKnown RBP13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 CGAP01215 116 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 C8orf88P0DMB2 117 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 CSRP1P21291 193 aaKnown RBP13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 FOXA3P55318 350 aaPredicted RBP13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 ZNF826PQ6ZT77 177 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 CHRNA10Q9GZZ6 450 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 WDR54Q9H977 334 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 TMEM140Q9NV12 185 aa13.54□□□□□ -0.24
CLSTN1-201ENST00000361311 FNDC1Q4ZHG4 1894 aaPredicted RBP13.53□□□□□ -0.24
CLSTN1-201ENST00000361311 CRYABP02511 175 aaKnown RBP13.53□□□□□ -0.24
CLSTN1-201ENST00000361311 MAGEA5P43359 124 aa13.53□□□□□ -0.24
CLSTN1-201ENST00000361311 LINC01551Q86U37 167 aa13.53□□□□□ -0.24
CLSTN1-201ENST00000361311 PERPQ96FX8 193 aa13.53□□□□□ -0.24
CLSTN1-201ENST00000361311 ZNF324O75467 553 aaPredicted RBP13.53□□□□□ -0.24
CLSTN1-201ENST00000361311 PFN1P07737 140 aaKnown RBP13.53□□□□□ -0.24
CLSTN1-201ENST00000361311 IL6RP08887 468 aaPredicted RBP13.53□□□□□ -0.24
CLSTN1-201ENST00000361311 FABP2P12104 132 aa13.53□□□□□ -0.24
CLSTN1-201ENST00000361311 MEOX1P50221 254 aa13.53□□□□□ -0.24
CLSTN1-201ENST00000361311 LYZP61626 148 aa13.53□□□□□ -0.24
CLSTN1-201ENST00000361311 SARAFQ96BY9 339 aa13.53□□□□□ -0.24
CLSTN1-201ENST00000361311 WIPF3A6NGB9 483 aa13.52□□□□□ -0.24
CLSTN1-201ENST00000361311 C17orf98A8MV24 154 aa13.52□□□□□ -0.24
CLSTN1-201ENST00000361311 FOXL1Q12952 345 aa13.52□□□□□ -0.24
CLSTN1-201ENST00000361311 IL15RAQ13261 267 aa13.52□□□□□ -0.24
CLSTN1-201ENST00000361311 LDLRAD2Q5SZI1 272 aa13.52□□□□□ -0.24
CLSTN1-201ENST00000361311 VKORC1L1Q8N0U8 176 aa13.52□□□□□ -0.24
CLSTN1-201ENST00000361311 ZNF355PQ9NSJ1 428 aa13.52□□□□□ -0.24
CLSTN1-201ENST00000361311 CACNA1EQ15878 2313 aa13.52□□□□□ -0.24
CLSTN1-201ENST00000361311 TRA2AQ13595 282 aaKnown RBP eCLIP13.52□□□□□ -0.24
CLSTN1-201ENST00000361311 VSTM2AQ8TAG5 236 aa13.52□□□□□ -0.24
CLSTN1-201ENST00000361311 VWCEQ96DN2 955 aa13.52□□□□□ -0.24
CLSTN1-201ENST00000361311 POLR3KQ9Y2Y1 108 aaPredicted RBP13.52□□□□□ -0.24
CLSTN1-201ENST00000361311 OR2J3O76001 311 aa13.52□□□□□ -0.25
CLSTN1-201ENST00000361311 SELLP14151 372 aa13.52□□□□□ -0.25
CLSTN1-201ENST00000361311 HSPE1P61604 102 aaKnown RBP13.52□□□□□ -0.25
CLSTN1-201ENST00000361311 SLC25A53Q5H9E4 307 aa13.52□□□□□ -0.25
CLSTN1-201ENST00000361311 C1orf147Q96MC9 270 aaPredicted RBP13.52□□□□□ -0.25
CLSTN1-201ENST00000361311 ANAPC10Q9UM13 185 aa13.52□□□□□ -0.25
CLSTN1-201ENST00000361311 PLAUP00749 431 aa13.52□□□□□ -0.25
CLSTN1-201ENST00000361311 UMODP07911 640 aa13.52□□□□□ -0.25
CLSTN1-201ENST00000361311 LYPD6BQ8NI32 183 aa13.52□□□□□ -0.25
CLSTN1-201ENST00000361311 HARBI1Q96MB7 349 aa13.52□□□□□ -0.25
CLSTN1-201ENST00000361311 AGMATQ9BSE5 352 aa13.52□□□□□ -0.25
CLSTN1-201ENST00000361311 ZNF581Q9P0T4 197 aa13.52□□□□□ -0.25
CLSTN1-201ENST00000361311 EFNA2O43921 213 aa13.51□□□□□ -0.25
CLSTN1-201ENST00000361311 SSPNQ14714 243 aa13.51□□□□□ -0.25
CLSTN1-201ENST00000361311 C5orf17Q8NAS9 161 aa13.51□□□□□ -0.25
CLSTN1-201ENST00000361311 OR1L8Q8NGR8 309 aa13.51□□□□□ -0.25
CLSTN1-201ENST00000361311 FBXW9Q5XUX1 488 aa13.51□□□□□ -0.25
CLSTN1-201ENST00000361311 UNQ5815/PRO19632Q6UWF5 114 aa13.51□□□□□ -0.25
CLSTN1-201ENST00000361311 OR5P3Q8WZ94 311 aa13.51□□□□□ -0.25
CLSTN1-201ENST00000361311 PGLYRP4Q96LB8 373 aa13.51□□□□□ -0.25
CLSTN1-201ENST00000361311 IGKV1-27A0A075B6S5 117 aa13.51□□□□□ -0.25
CLSTN1-201ENST00000361311 NPSP0C0P6 89 aa13.51□□□□□ -0.25
CLSTN1-201ENST00000361311 PRDX2P32119 198 aa13.51□□□□□ -0.25
CLSTN1-201ENST00000361311 SGK494Q96LW2 274 aa13.51□□□□□ -0.25
CLSTN1-201ENST00000361311 MS4A5Q9H3V2 200 aa13.51□□□□□ -0.25
CLSTN1-201ENST00000361311 PGPA6NDG6 321 aa13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 GCSAMLQ5JQS6 135 aa13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 SMRP1Q8NCR6 262 aa13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 NFAM1Q8NET5 270 aaPredicted RBP13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 TCFL5Q9UL49 500 aa13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 ABCA7Q8IZY2 2146 aa13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 LRRK1Q38SD2 2015 aa13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 LOC389332A0A1B0GUA5 103 aa13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 A0A1W2PRS3 328 aa13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 hADV38S2A0JD32 116 aa13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 COX5BP10606 129 aa13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 MRPL52Q86TS9 123 aaKnown RBP13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 SPOCK3Q9BQ16 436 aa13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 REPIN1Q9BWE0 567 aaKnown RBP13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 TRAV9-2A0A087WT02 112 aa13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 TIMP3P35625 211 aa13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 GNB2P62879 340 aa13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 ACSF3Q4G176 576 aaPredicted RBP13.5□□□□□ -0.25
CLSTN1-201ENST00000361311 C5orf24Q7Z6I8 188 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms