RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 DAPK2Q9UIK4 370 aa11.84□□□□□ -0.51
DDX55-202ENST00000354291 LINC00473A8K010 186 aa11.83□□□□□ -0.52
DDX55-202ENST00000354291 CRYZL1O95825 349 aa11.83□□□□□ -0.52
DDX55-202ENST00000354291 KIR2DS2P43631 304 aa11.83□□□□□ -0.52
DDX55-202ENST00000354291 CNIH2Q6PI25 160 aa11.83□□□□□ -0.52
DDX55-202ENST00000354291 ZNF645Q8N7E2 425 aa11.83□□□□□ -0.52
DDX55-202ENST00000354291 USMG5Q96IX5 58 aa11.83□□□□□ -0.52
DDX55-202ENST00000354291 PHB2Q99623 299 aa11.83□□□□□ -0.52
DDX55-202ENST00000354291 TINAGL1Q9GZM7 467 aaPredicted RBP11.83□□□□□ -0.52
DDX55-202ENST00000354291 COA4Q9NYJ1 87 aa11.83□□□□□ -0.52
DDX55-202ENST00000354291 PRELID3BQ9Y3B1 194 aa11.83□□□□□ -0.52
DDX55-202ENST00000354291 RRP15Q9Y3B9 282 aaKnown RBP11.83□□□□□ -0.52
DDX55-202ENST00000354291 OR2W1Q9Y3N9 320 aa11.83□□□□□ -0.52
DDX55-202ENST00000354291 MSGN1A6NI15 193 aa11.82□□□□□ -0.52
DDX55-202ENST00000354291 CREBL2O60519 120 aaPredicted RBP11.82□□□□□ -0.52
DDX55-202ENST00000354291 HLA-DQB1P01920 261 aa11.82□□□□□ -0.52
DDX55-202ENST00000354291 FOLR2P14207 255 aa11.82□□□□□ -0.52
DDX55-202ENST00000354291 CD36P16671 472 aa11.82□□□□□ -0.52
DDX55-202ENST00000354291 EDN2P20800 178 aa11.82□□□□□ -0.52
DDX55-202ENST00000354291 GNG2P59768 71 aa11.82□□□□□ -0.52
DDX55-202ENST00000354291 TNXAQ16473 311 aa11.82□□□□□ -0.52
DDX55-202ENST00000354291 PRSS8Q16651 343 aa11.82□□□□□ -0.52
DDX55-202ENST00000354291 DEFB135Q30KP9 77 aa11.82□□□□□ -0.52
DDX55-202ENST00000354291 SFXN4Q6P4A7 337 aa11.82□□□□□ -0.52
DDX55-202ENST00000354291 TMEM217Q8N7C4 229 aa11.82□□□□□ -0.52
DDX55-202ENST00000354291 OR52B4Q8NGK2 314 aa11.82□□□□□ -0.52
DDX55-202ENST00000354291 TMEM235A6NFC5 223 aa11.81□□□□□ -0.52
DDX55-202ENST00000354291 J3QRK9 145 aa11.81□□□□□ -0.52
DDX55-202ENST00000354291 XRCC3O43542 346 aa11.81□□□□□ -0.52
DDX55-202ENST00000354291 ACTL6BO94805 426 aa11.81□□□□□ -0.52
DDX55-202ENST00000354291 ATF4P18848 351 aaPredicted RBP11.81□□□□□ -0.52
DDX55-202ENST00000354291 NFYAP23511 347 aaPredicted RBP11.81□□□□□ -0.52
DDX55-202ENST00000354291 SDC2P34741 201 aa11.81□□□□□ -0.52
DDX55-202ENST00000354291 SCAND1P57086 179 aa11.81□□□□□ -0.52
DDX55-202ENST00000354291 MRGPRG-AS1Q2M3A8 158 aa11.81□□□□□ -0.52
DDX55-202ENST00000354291 ZNF773Q6PK81 442 aa11.81□□□□□ -0.52
DDX55-202ENST00000354291 LINC00336Q6ZUF6 198 aa11.81□□□□□ -0.52
DDX55-202ENST00000354291 NUDCD2Q8WVJ2 157 aa11.81□□□□□ -0.52
DDX55-202ENST00000354291 DCUN1D5Q9BTE7 237 aa11.81□□□□□ -0.52
DDX55-202ENST00000354291 OR51E2Q9H255 320 aa11.81□□□□□ -0.52
DDX55-202ENST00000354291 ZC4H2Q9NQZ6 224 aa11.81□□□□□ -0.52
DDX55-202ENST00000354291 RHBDL2Q9NX52 303 aa11.81□□□□□ -0.52
DDX55-202ENST00000354291 TECRQ9NZ01 308 aaKnown RBP11.81□□□□□ -0.52
DDX55-202ENST00000354291 ANXA10Q9UJ72 324 aa11.81□□□□□ -0.52
DDX55-202ENST00000354291 TP53TG1Q9Y2A0 90 aa11.81□□□□□ -0.52
DDX55-202ENST00000354291 MRPS7Q9Y2R9 242 aaKnown RBP11.81□□□□□ -0.52
DDX55-202ENST00000354291 C2orf70A6NJV1 201 aa11.8□□□□□ -0.52
DDX55-202ENST00000354291 BMPR1BO00238 502 aa11.8□□□□□ -0.52
DDX55-202ENST00000354291 MPPED1O15442 326 aa11.8□□□□□ -0.52
DDX55-202ENST00000354291 FCGR3BO75015 233 aa11.8□□□□□ -0.52
DDX55-202ENST00000354291 RBMXL2O75526 392 aaKnown RBP11.8□□□□□ -0.52
DDX55-202ENST00000354291 OR9G9P0C7N8 305 aa11.8□□□□□ -0.52
DDX55-202ENST00000354291 APELAP0DMC3 54 aa11.8□□□□□ -0.52
DDX55-202ENST00000354291 CDK10Q15131 360 aa11.8□□□□□ -0.52
DDX55-202ENST00000354291 IDO2Q6ZQW0 420 aa11.8□□□□□ -0.52
DDX55-202ENST00000354291 KCTD9Q7L273 389 aa11.8□□□□□ -0.52
DDX55-202ENST00000354291 LGALS14Q8TCE9 139 aa11.8□□□□□ -0.52
DDX55-202ENST00000354291 SRSF12Q8WXF0 261 aaKnown RBP11.8□□□□□ -0.52
DDX55-202ENST00000354291 ACOT12Q8WYK0 555 aa11.8□□□□□ -0.52
DDX55-202ENST00000354291 SPIN2AQ99865 258 aa11.8□□□□□ -0.52
DDX55-202ENST00000354291 SPIN2BQ9BPZ2 258 aa11.8□□□□□ -0.52
DDX55-202ENST00000354291 RBMX2Q9Y388 322 aaKnown RBP11.8□□□□□ -0.52
DDX55-202ENST00000354291 A0A1B0GVY2 172 aa11.79□□□□□ -0.52
DDX55-202ENST00000354291 TUSC2O75896 110 aa11.79□□□□□ -0.52
DDX55-202ENST00000354291 MXD1Q05195 221 aa11.79□□□□□ -0.52
DDX55-202ENST00000354291 Q6ZWC4 215 aa11.79□□□□□ -0.52
DDX55-202ENST00000354291 MMD2Q8IY49 270 aa11.79□□□□□ -0.52
DDX55-202ENST00000354291 ADAD2Q8NCV1 583 aaKnown RBP11.79□□□□□ -0.52
DDX55-202ENST00000354291 HSD17B10Q99714 261 aaKnown RBP11.79□□□□□ -0.52
DDX55-202ENST00000354291 ZNF430Q9H8G1 570 aaPredicted RBP11.79□□□□□ -0.52
DDX55-202ENST00000354291 PLA2G2EQ9NZK7 142 aa11.79□□□□□ -0.52
DDX55-202ENST00000354291 ETV7Q9Y603 341 aa11.79□□□□□ -0.52
DDX55-202ENST00000354291 A0A0A6YYH2 397 aa11.78□□□□□ -0.52
DDX55-202ENST00000354291 LOC100506127A0A0U1RQW1 187 aa11.78□□□□□ -0.52
DDX55-202ENST00000354291 A6NJ64 397 aa11.78□□□□□ -0.52
DDX55-202ENST00000354291 SSX5O60225 188 aa11.78□□□□□ -0.52
DDX55-202ENST00000354291 TMEM127O75204 238 aa11.78□□□□□ -0.52
DDX55-202ENST00000354291 SCAF4O95104 1147 aaKnown RBP11.78□□□□□ -0.52
DDX55-202ENST00000354291 IFNA4P05014 189 aa11.78□□□□□ -0.52
DDX55-202ENST00000354291 SAA1P0DJI8 122 aaPredicted RBP11.78□□□□□ -0.52
DDX55-202ENST00000354291 APOC4P55056 127 aa11.78□□□□□ -0.52
DDX55-202ENST00000354291 ZNF45Q02386 682 aa11.78□□□□□ -0.52
DDX55-202ENST00000354291 TM4SF20Q53R12 229 aa11.78□□□□□ -0.52
DDX55-202ENST00000354291 VSTM2AQ8TAG5 236 aa11.78□□□□□ -0.52
DDX55-202ENST00000354291 FBXL17Q9UF56 701 aa11.78□□□□□ -0.52
DDX55-202ENST00000354291 TRAV18A0A075B6X5 111 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 IGKV1D-13A0A0B4J2D9 117 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 FAM223BA6NKX1 122 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 IGLV2-14P01704 120 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 CLEC2LP0C7M8 214 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 IGKV1-13P0DP09 117 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 ARPC4P59998 168 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 NANOS2P60321 138 aaKnown RBP11.77□□□□□ -0.53
DDX55-202ENST00000354291 RPL30P62888 115 aaKnown RBP11.77□□□□□ -0.53
DDX55-202ENST00000354291 ATP5G2Q06055 141 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 IDNKQ5T6J7 187 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 ZNF57Q68EA5 555 aaPredicted RBP11.77□□□□□ -0.53
DDX55-202ENST00000354291 ZNF66Q6ZN08 573 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 SLC25A42Q86VD7 318 aa11.77□□□□□ -0.53
DDX55-202ENST00000354291 FAM223AQ8IWN6 122 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms