RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 ZNF850A8MQ14 1090 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 MKRN2OSH3BPM6 223 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 MFNGO00587 321 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 SLC22A5O76082 557 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 CST4P01036 141 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 PMP2P02689 132 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 CSN2P05814 226 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 OR4E1P0C645 316 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 CCL2P13500 99 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 CXCL3P19876 107 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 GABRR1P24046 479 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 HRH1P35367 487 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 TAS2R31P59538 309 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 PRDX4Q13162 271 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 GRK1Q15835 563 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 CEACAM21Q3KPI0 293 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 CHRFAM7AQ494W8 412 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 KLF17Q5JT82 389 aaPredicted RBP2.94□□□□□ -1.94
SMCO3-201ENST00000316048 VAX1Q5SQQ9 334 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 Q6ZT83 130 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 MOB1BQ7L9L4 216 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 TMED4Q7Z7H5 227 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 MKXQ8IYA7 352 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 SAXO1Q8IYX7 474 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 OSR2Q8N2R0 312 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 C6orf223Q8N319 242 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 ARRDC1Q8N5I2 433 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 C12orf45Q8N5I9 185 aaPredicted RBP2.94□□□□□ -1.94
SMCO3-201ENST00000316048 CNEP1R1Q8N9A8 125 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 SLC30A7Q8NEW0 376 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 OR5A2Q8NGI9 324 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 OR5H2Q8NGV7 314 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 OR2T35Q8NGX2 323 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 OR10K1Q8NGX5 313 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 OR6K3Q8NGY3 331 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 TERB2Q8NHR7 220 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 ZNF431Q8TF32 576 aaPredicted RBP2.94□□□□□ -1.94
SMCO3-201ENST00000316048 SEC22CQ9BRL7 303 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 C12orf4Q9NQ89 552 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 TREM2Q9NZC2 230 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 CLCF1Q9UBD9 225 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 ST3GAL6Q9Y274 331 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 STARD10Q9Y365 291 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 NOP16Q9Y3C1 178 aaKnown RBP2.94□□□□□ -1.94
SMCO3-201ENST00000316048 HSPB11Q9Y547 144 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 MPC1Q9Y5U8 109 aa2.94□□□□□ -1.94
SMCO3-201ENST00000316048 RBMY1BA6NDE4 496 aaKnown RBP2.93□□□□□ -1.94
SMCO3-201ENST00000316048 RBMY1EA6NEQ0 496 aaKnown RBP2.93□□□□□ -1.94
SMCO3-201ENST00000316048 OR5B21A6NL26 309 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 CD300LBA8K4G0 201 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 TRAPPC2LH3BP13 241 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 BCL2L11O43521 198 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 ANGPTL7O43827 346 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 OR2A4O95047 310 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 BRI3O95415 125 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 IGHV3-23P01764 117 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 CRHP06850 196 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 GIPP09681 153 aaPredicted RBP2.93□□□□□ -1.94
SMCO3-201ENST00000316048 RBMY1DP0C7P1 496 aaKnown RBP2.93□□□□□ -1.94
SMCO3-201ENST00000316048 RBMY1A1P0DJD3 496 aaKnown RBP2.93□□□□□ -1.94
SMCO3-201ENST00000316048 CBR1P16152 277 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 PMELP40967 661 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 HNRNPA3P51991 378 aaKnown RBP2.93□□□□□ -1.94
SMCO3-201ENST00000316048 DSCR10P59022 87 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 UBE2MP61081 183 aaKnown RBP2.93□□□□□ -1.94
SMCO3-201ENST00000316048 RAB14P61106 215 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 MPPED2Q15777 294 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 GABRA6Q16445 453 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 TAF9Q16594 264 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 OR52W1Q6IF63 320 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 LPCAT3Q6P1A2 487 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 TFAP2EQ6VUC0 442 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 Q6ZS92 163 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 BHLHA15Q7RTS1 189 aaPredicted RBP2.93□□□□□ -1.94
SMCO3-201ENST00000316048 MDP1Q86V88 176 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 C1orf174Q8IYL3 243 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 CEND1Q8N111 149 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 GRPEL2Q8TAA5 225 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 RPUSD4Q96CM3 377 aaKnown RBP2.93□□□□□ -1.94
SMCO3-201ENST00000316048 OR2A7Q96R45 310 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 PHB2Q99623 299 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 CHST6Q9GZX3 395 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 ZNF702PQ9H963 129 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 RPS10P5Q9NQ39 176 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 PEF1Q9UBV8 284 aaKnown RBP2.93□□□□□ -1.94
SMCO3-201ENST00000316048 KIF25Q9UIL4 384 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 ANAPC10Q9UM13 185 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 PUS1Q9Y606 427 aaKnown RBP eCLIP2.93□□□□□ -1.94
SMCO3-201ENST00000316048 COL6A3P12111 3177 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 PTPRBP23467 1997 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 KNTC1P50748 2209 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 IGKV1-27A0A075B6S5 117 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 PQLC2LA1A4F0 135 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 F5H5P2 479 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 SMLR1H3BR10 107 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 TEX46H3BTG2 121 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 LYZL6O75951 148 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 IGHV3-48P01763 117 aa2.93□□□□□ -1.94
SMCO3-201ENST00000316048 HLA-AP01891 365 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms