RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ADAM20O43506 726 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 SOX15O60248 233 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 SS18L1O75177 396 aaPredicted RBP4.05□□□□□ -1.76
CKS1B-201ENST00000308987 OR7C1O76099 320 aaPredicted RBP4.05□□□□□ -1.76
CKS1B-201ENST00000308987 CYB5R3P00387 301 aaPredicted RBP4.05□□□□□ -1.76
CKS1B-201ENST00000308987 IFNA1P01562 189 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 IFNA10P01566 189 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 OPN1MWP04001 364 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 ARG1P05089 322 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 OPN1MW2P0DN77 364 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 OPN1MW3P0DN78 364 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 F2RP25116 425 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 MDH2P40926 338 aaKnown RBP4.05□□□□□ -1.76
CKS1B-201ENST00000308987 RPS10P46783 165 aaKnown RBP4.05□□□□□ -1.76
CKS1B-201ENST00000308987 FHITP49789 147 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 DYNLT3P51808 116 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 PAX9P55771 341 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 CCL20P78556 96 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 DLK1P80370 383 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 ELOBQ15370 118 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 MSMO1Q15800 293 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 CEACAM16Q2WEN9 425 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 CEACAM21Q3KPI0 293 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 AKIRIN2Q53H80 203 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 FAM209BQ5JX69 171 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 TSPO2Q5TGU0 170 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF818PQ6ZRF7 136 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 ODF3L1Q8IXM7 274 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 GAPTQ8N292 157 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 TCTEX1D1Q8N7M0 179 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 LINC00469Q8N7U9 141 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 OR5C1Q8NGR4 320 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 OR11L1Q8NGX0 322 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 TMEM158Q8WZ71 300 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 PIGCQ92535 297 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 APOBEC3DQ96AK3 386 aaPredicted RBP4.05□□□□□ -1.76
CKS1B-201ENST00000308987 CYYR1Q96J86 154 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 SSX3Q99909 188 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 AGMATQ9BSE5 352 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 SRXN1Q9BYN0 137 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 PKIBQ9C010 78 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 PARP12Q9H0J9 701 aaKnown RBP4.05□□□□□ -1.76
CKS1B-201ENST00000308987 YAE1D1Q9NRH1 226 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 TMEM140Q9NV12 185 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 DOK5Q9P104 306 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 PROCRQ9UNN8 238 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 TIMM9Q9Y5J7 89 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 MPC1Q9Y5U8 109 aa4.05□□□□□ -1.76
CKS1B-201ENST00000308987 PUS1Q9Y606 427 aaKnown RBP eCLIP4.05□□□□□ -1.76
CKS1B-201ENST00000308987 IGHV3-15A0A0B4J1V0 119 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 SHISA9B4DS77 424 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 TMEM250H0YL14 139 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 PPP1R2P9O14990 202 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 CHST1O43916 411 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 CXCL13O43927 109 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 SSSCA1O60232 199 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 PGLYRP1O75594 196 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-201ENST00000308987 PTBP3O95758 552 aaKnown RBP4.04□□□□□ -1.76
CKS1B-201ENST00000308987 TMEM50AO95807 157 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 BCL2P10415 239 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 DAOP14920 347 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 B4GALT1P15291 398 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 HIST1H1BP16401 226 aaKnown RBP4.04□□□□□ -1.76
CKS1B-201ENST00000308987 GCSHP23434 173 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 ARR3P36575 388 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 AKR1C3P42330 323 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 PROK1P58294 105 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 OR2B8PP59922 312 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 SSTP61278 116 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 HBG1P69891 147 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 HBG2P69892 147 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 PRDX4Q13162 271 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 ATP6V1FQ16864 119 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF674Q2M3X9 581 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF672Q499Z4 452 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-201ENST00000308987 LBHQ53QV2 105 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-201ENST00000308987 IGSF11Q5DX21 431 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 CXorf66Q5JRM2 361 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-201ENST00000308987 COA6Q5JTJ3 125 aaKnown RBP4.04□□□□□ -1.76
CKS1B-201ENST00000308987 SPIN3Q5JUX0 258 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 NCMAPQ5T1S8 102 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 C11orf71Q6IPW1 123 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 SLC25A26Q70HW3 274 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 NUFIP2Q7Z417 695 aaKnown RBP4.04□□□□□ -1.76
CKS1B-201ENST00000308987 CENPVQ7Z7K6 275 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF573Q86YE8 665 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 CALHM1Q8IU99 346 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 Q8IYB0 196 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 ZDHHC23Q8IYP9 409 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 C1orf87Q8N0U7 546 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 ZBTB34Q8NCN2 500 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 OR10D3Q8NH80 312 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 AKR7LQ8NHP1 331 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 SCGB1C1Q8TD33 95 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 Q8WTZ3 238 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 S100PBPQ96BU1 408 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 BTF3L4Q96K17 158 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 HIST1H2AAQ96QV6 131 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 RARRES2Q99969 163 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 PYGO2Q9BRQ0 406 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms