RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 HTD2P86397 168 aa13.17□□□□□ -0.3
CTDSP1-201ENST00000273062 ZNF439Q8NDP4 499 aa13.17□□□□□ -0.3
CTDSP1-201ENST00000273062 ST8SIA1Q92185 356 aa13.17□□□□□ -0.3
CTDSP1-201ENST00000273062 IGKV1-6A0A0C4DH72 117 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 A0A1B0GV72 72 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 SPAARA0A1B0GVQ0 90 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 A0A1W2PNR3 127 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 DEGS1O15121 323 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 ZFAND5O76080 213 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 IGKV1-5P01602 117 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 TBR1Q16650 682 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 OR4A5Q8NH83 315 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 PEF1Q9UBV8 284 aaKnown RBP13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 GPR179Q6PRD1 2367 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 ZNF407Q9C0G0 2248 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 C7orf71A4D174 169 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 C2orf70A6NJV1 201 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 TNFSF15O95150 251 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 REG1AP05451 166 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 MSR1P21757 451 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 F2RP25116 425 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 GABRA6Q16445 453 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 DCAF12Q5T6F0 453 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 MRPL54Q6P161 138 aaKnown RBP13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 OR10W1Q8NGF6 305 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 PP6455Q8WZ26 134 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 SPSB1Q96BD6 273 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 ATP6V0BQ99437 205 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 HES4Q9HCC6 221 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 ATP23Q9Y6H3 246 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 EML6Q6ZMW3 1958 aa13.16□□□□□ -0.3
CTDSP1-201ENST00000273062 TECTAO75443 2155 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 LIPT2A6NK58 231 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 HSPB6O14558 160 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 CD5LO43866 347 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 OR7C1O76099 320 aaPredicted RBP13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 AGFG2O95081 481 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 CLRN1P58418 232 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 PCOLCEQ15113 449 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 ASPHD1Q5U4P2 390 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 NEGR1Q7Z3B1 354 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 DEFB126Q9BYW3 111 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 TIMM9Q9Y5J7 89 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 SDK2Q58EX2 2172 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 ZNF207O43670 478 aaKnown RBP13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 PDCD6O75340 191 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 GDF1P27539 372 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 RSPO1Q2MKA7 263 aaPredicted RBP13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 RPEL1Q2QD12 228 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 OR8B3Q8NGG8 313 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 OR1F12Q8NHA8 337 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 RNF138Q8WVD3 245 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 OR8B2Q96RD0 313 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 V9GYV3 84 aa13.15□□□□□ -0.3
CTDSP1-201ENST00000273062 CD300LBA8K4G0 201 aa13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 MT-CO2P00403 227 aa13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 COX5AP20674 150 aa13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 UBE2G1P62253 170 aa13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 OSR2Q8N2R0 312 aa13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 SPACA9Q96E40 222 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 NPCDR1Q9BY65 106 aa13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 KCNIP2Q9NS61 270 aa13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 ARL2-SNX15V9GYD0 113 aa13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 SH2D7A6NKC9 451 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 DKK1O94907 266 aa13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 CLDN1O95832 211 aa13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 MC5RP33032 325 aa13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 ZXDAP98168 799 aa13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 FXYD3Q14802 87 aa13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 SLC25A40Q8TBP6 338 aa13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 C18orf32Q8TCD1 76 aa13.14□□□□□ -0.31
CTDSP1-201ENST00000273062 NCOR1O75376 2440 aa13.13□□□□□ -0.31
CTDSP1-201ENST00000273062 J3QR06 171 aa13.13□□□□□ -0.31
CTDSP1-201ENST00000273062 M0R2Z0 102 aa13.13□□□□□ -0.31
CTDSP1-201ENST00000273062 SLAQ13239 276 aa13.13□□□□□ -0.31
CTDSP1-201ENST00000273062 C1orf210Q8IVY1 113 aa13.13□□□□□ -0.31
CTDSP1-201ENST00000273062 MCRIP2Q9BUT9 160 aaKnown RBP13.13□□□□□ -0.31
CTDSP1-201ENST00000273062 TECRQ9NZ01 308 aaKnown RBP13.13□□□□□ -0.31
CTDSP1-201ENST00000273062 CHCHD2Q9Y6H1 151 aaPredicted RBP13.13□□□□□ -0.31
CTDSP1-201ENST00000273062 OR4C46A6NHA9 309 aa13.13□□□□□ -0.31
CTDSP1-201ENST00000273062 SNAI2O43623 268 aa13.13□□□□□ -0.31
CTDSP1-201ENST00000273062 KLF7O75840 302 aaPredicted RBP13.13□□□□□ -0.31
CTDSP1-201ENST00000273062 LINC00869P0C866 280 aa13.13□□□□□ -0.31
CTDSP1-201ENST00000273062 MALLQ13021 153 aa13.13□□□□□ -0.31
CTDSP1-201ENST00000273062 OR51B2Q9Y5P1 312 aa13.13□□□□□ -0.31
CTDSP1-201ENST00000273062 NTN3O00634 580 aaPredicted RBP13.12□□□□□ -0.31
CTDSP1-201ENST00000273062 RRHO14718 337 aa13.12□□□□□ -0.31
CTDSP1-201ENST00000273062 SUMO3P55854 103 aaPredicted RBP13.12□□□□□ -0.31
CTDSP1-201ENST00000273062 CNN3Q15417 329 aaKnown RBP13.12□□□□□ -0.31
CTDSP1-201ENST00000273062 WDR82Q6UXN9 313 aa13.12□□□□□ -0.31
CTDSP1-201ENST00000273062 LINC00173Q6ZV60 143 aa13.12□□□□□ -0.31
CTDSP1-201ENST00000273062 WDR54Q9H977 334 aa13.12□□□□□ -0.31
CTDSP1-201ENST00000273062 C19orf25Q9UFG5 118 aaPredicted RBP13.12□□□□□ -0.31
CTDSP1-201ENST00000273062 TRAV9-1A0A075B6T8 112 aa13.12□□□□□ -0.31
CTDSP1-201ENST00000273062 IGHV1-45A0A0A0MS14 117 aa13.12□□□□□ -0.31
CTDSP1-201ENST00000273062 LRP5LA4QPB2 252 aa13.12□□□□□ -0.31
CTDSP1-201ENST00000273062 TMEM211Q6ICI0 200 aa13.12□□□□□ -0.31
CTDSP1-201ENST00000273062 SLC25A34Q6PIV7 304 aa13.12□□□□□ -0.31
CTDSP1-201ENST00000273062 TMEM14EPQ6UXP3 125 aa13.12□□□□□ -0.31
CTDSP1-201ENST00000273062 C12orf54Q6X4T0 127 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms