RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 AQP10Q96PS8 301 aa14.34□□□□□ -0.11
TSPAN3-201ENST00000267970 ATP5G3P48201 142 aa14.34□□□□□ -0.11
TSPAN3-201ENST00000267970 CCDC144NLQ6NUI1 221 aa14.34□□□□□ -0.11
TSPAN3-201ENST00000267970 ZNF414Q96IQ9 312 aa14.34□□□□□ -0.11
TSPAN3-201ENST00000267970 A0A1W2PQF6 199 aa14.34□□□□□ -0.11
TSPAN3-201ENST00000267970 JKAMPQ9P055 326 aa14.34□□□□□ -0.11
TSPAN3-201ENST00000267970 TRAV24A0A0B4J272 114 aa14.34□□□□□ -0.11
TSPAN3-201ENST00000267970 DANCRP0C864 163 aa14.34□□□□□ -0.11
TSPAN3-201ENST00000267970 GCHFRP30047 84 aa14.34□□□□□ -0.11
TSPAN3-201ENST00000267970 MFAP4P55083 255 aa14.34□□□□□ -0.11
TSPAN3-201ENST00000267970 SF3B6Q9Y3B4 125 aaKnown RBP14.34□□□□□ -0.11
TSPAN3-201ENST00000267970 KIAA1217Q5T5P2 1943 aa14.33□□□□□ -0.11
TSPAN3-201ENST00000267970 ODAMA1E959 279 aa14.33□□□□□ -0.11
TSPAN3-201ENST00000267970 PPIAL4CA0A0B4J2A2 164 aa14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 PPIAL4GP0DN37 164 aa14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 MEF2CQ06413 473 aaPredicted RBP14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 WDR82Q6UXN9 313 aa14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 KCNK17Q96T54 332 aa14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 ALX4Q9H161 411 aaPredicted RBP14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 COL22A1Q8NFW1 1626 aaPredicted RBP14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 A0A1W2PRX2 142 aa14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 ATP5G2Q06055 141 aa14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 F5P12259 2224 aa14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 IGLV1-36A0A0B4J1U3 117 aa14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 RAMP1O60894 148 aa14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 LHX2P50458 406 aa14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 SRSF3P84103 164 aaKnown RBP14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 ZNF501Q96CX3 271 aaPredicted RBP14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 SSBP4Q9BWG4 385 aaPredicted RBP14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 DRAM1Q8N682 238 aa14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 OR51G1Q8NGK1 321 aa14.33□□□□□ -0.12
TSPAN3-201ENST00000267970 ADAMTSL1Q8N6G6 1762 aa14.32□□□□□ -0.12
TSPAN3-201ENST00000267970 STAG3L3P0CL85 134 aa14.32□□□□□ -0.12
TSPAN3-201ENST00000267970 HBBP68871 147 aa14.32□□□□□ -0.12
TSPAN3-201ENST00000267970 KLF14Q8TD94 323 aaPredicted RBP14.32□□□□□ -0.12
TSPAN3-201ENST00000267970 HTN3P15516 51 aa14.32□□□□□ -0.12
TSPAN3-201ENST00000267970 DNASE2BQ8WZ79 361 aa14.32□□□□□ -0.12
TSPAN3-201ENST00000267970 IGFBP2P18065 325 aa14.32□□□□□ -0.12
TSPAN3-201ENST00000267970 SLC25A47Q6Q0C1 308 aa14.32□□□□□ -0.12
TSPAN3-201ENST00000267970 TCF19Q9Y242 345 aa14.32□□□□□ -0.12
TSPAN3-201ENST00000267970 CLEC2AQ6UVW9 174 aa14.32□□□□□ -0.12
TSPAN3-201ENST00000267970 KIR3DL3Q8N743 410 aa14.32□□□□□ -0.12
TSPAN3-201ENST00000267970 TMEM70Q9BUB7 260 aa14.32□□□□□ -0.12
TSPAN3-201ENST00000267970 G6PC2Q9NQR9 355 aa14.32□□□□□ -0.12
TSPAN3-201ENST00000267970 RPS11P62280 158 aaKnown RBP eCLIP14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 FAM214BQ7L5A3 538 aa14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 LINC01560Q8TB33 94 aa14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 FSTP19883 344 aa14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 ASPHD2Q6ICH7 369 aa14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 FOCADQ5VW36 1801 aa14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 IL6RP08887 468 aaPredicted RBP14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 ZNF708P17019 499 aa14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 DCTN5Q9BTE1 182 aa14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 SRSF4Q08170 494 aaKnown RBP14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 ZP4Q12836 540 aa14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 FOXA2Q9Y261 457 aaPredicted RBP14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 RREB1Q92766 1687 aa14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 OR11H12B2RN74 326 aa14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 NDUFS8O00217 210 aa14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 RNASE4P34096 147 aaKnown RBP14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 GNG5P63218 68 aa14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 C1orf122Q6ZSJ8 110 aa14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 OR11H1Q8NG94 326 aa14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 OR11H2Q8NH07 326 aa14.31□□□□□ -0.12
TSPAN3-201ENST00000267970 C21orf140B9A014 251 aa14.3□□□□□ -0.12
TSPAN3-201ENST00000267970 HSPE1P61604 102 aaKnown RBP14.3□□□□□ -0.12
TSPAN3-201ENST00000267970 FADS6Q8N9I5 356 aa14.3□□□□□ -0.12
TSPAN3-201ENST00000267970 DIRC2Q96SL1 478 aa14.3□□□□□ -0.12
TSPAN3-201ENST00000267970 IGHV3-64A0A075B6Q5 118 aa14.3□□□□□ -0.12
TSPAN3-201ENST00000267970 CA11O75493 328 aa14.3□□□□□ -0.12
TSPAN3-201ENST00000267970 SMAGPQ0VAQ4 97 aa14.3□□□□□ -0.12
TSPAN3-201ENST00000267970 NAA38Q9BRA0 125 aaKnown RBP14.3□□□□□ -0.12
TSPAN3-201ENST00000267970 TRIP12Q14669 1992 aaPredicted RBP14.3□□□□□ -0.12
TSPAN3-201ENST00000267970 PSG9Q00887 426 aa14.3□□□□□ -0.12
TSPAN3-201ENST00000267970 POC1AQ8NBT0 407 aa14.3□□□□□ -0.12
TSPAN3-201ENST00000267970 A0A0U1RRA0 63 aa14.3□□□□□ -0.12
TSPAN3-201ENST00000267970 MAP1BP46821 2468 aaKnown RBP14.3□□□□□ -0.12
TSPAN3-201ENST00000267970 FAM159AQ6UWV7 190 aa14.3□□□□□ -0.12
TSPAN3-201ENST00000267970 TCF24Q7RTU0 167 aa14.3□□□□□ -0.12
TSPAN3-201ENST00000267970 RPRMQ9NS64 109 aa14.3□□□□□ -0.12
TSPAN3-201ENST00000267970 TRBV7-9A0A0J9YWB2 115 aa14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 CENPVQ7Z7K6 275 aaPredicted RBP14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 DOCK1Q14185 1865 aa14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 SHISA3A0PJX4 238 aa14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 ISXQ2M1V0 245 aa14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 PRELID3AQ96N28 172 aa14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 A0A1W2PS18 150 aa14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 NPC2P61916 151 aa14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 FAM71F2Q6NXP2 309 aa14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 PCSK4Q6UW60 755 aa14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 GCSAMQ8N6F7 178 aa14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 MARS2Q96GW9 593 aaKnown RBP14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 LSM4Q9Y4Z0 139 aaKnown RBP14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 RAX2Q96IS3 184 aa14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 C19orf48Q6RUI8 117 aa14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 ITLN2Q8WWU7 325 aaPredicted RBP14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 RNASE7Q9H1E1 156 aaKnown RBP14.29□□□□□ -0.12
TSPAN3-201ENST00000267970 CXorf51AA0A1B0GTR3 108 aa14.28□□□□□ -0.12
TSPAN3-201ENST00000267970 KIR2DL4Q99706 377 aa14.28□□□□□ -0.12
TSPAN3-201ENST00000267970 BCORQ6W2J9 1755 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms