RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 KIR2DL5AQ8N109 375 aa14.5□□□□□ -0.09
TRAM1-201ENST00000262213 DIRC2Q96SL1 478 aa14.5□□□□□ -0.09
TRAM1-201ENST00000262213 GNG12Q9UBI6 72 aa14.5□□□□□ -0.09
TRAM1-201ENST00000262213 FOXH1O75593 365 aa14.5□□□□□ -0.09
TRAM1-201ENST00000262213 CRISP2P16562 243 aa14.5□□□□□ -0.09
TRAM1-201ENST00000262213 FABP6P51161 128 aa14.5□□□□□ -0.09
TRAM1-201ENST00000262213 OR5I1Q13606 314 aa14.5□□□□□ -0.09
TRAM1-201ENST00000262213 RPL39P5Q59GN2 51 aa14.5□□□□□ -0.09
TRAM1-201ENST00000262213 DCAF10Q5QP82 559 aa14.5□□□□□ -0.09
TRAM1-201ENST00000262213 C11orf53Q8IXP5 236 aa14.5□□□□□ -0.09
TRAM1-201ENST00000262213 IER2Q9BTL4 223 aa14.5□□□□□ -0.09
TRAM1-201ENST00000262213 GGTLC1Q9BX51 225 aa14.5□□□□□ -0.09
TRAM1-201ENST00000262213 TMEM106BQ9NUM4 274 aa14.5□□□□□ -0.09
TRAM1-201ENST00000262213 TMEM210A6NLX4 147 aa14.49□□□□□ -0.09
TRAM1-201ENST00000262213 RAB4AP20338 218 aa14.49□□□□□ -0.09
TRAM1-201ENST00000262213 RPL31P62899 125 aaKnown RBP14.49□□□□□ -0.09
TRAM1-201ENST00000262213 ACP7Q6ZNF0 438 aa14.49□□□□□ -0.09
TRAM1-201ENST00000262213 OR1L6Q8NGR2 347 aa14.49□□□□□ -0.09
TRAM1-201ENST00000262213 HSD17B10Q99714 261 aaKnown RBP14.49□□□□□ -0.09
TRAM1-201ENST00000262213 SAMD10Q9BYL1 202 aa14.49□□□□□ -0.09
TRAM1-201ENST00000262213 C9orf172C9J069 976 aa14.49□□□□□ -0.09
TRAM1-201ENST00000262213 K7EN84 100 aa14.49□□□□□ -0.09
TRAM1-201ENST00000262213 FCN1O00602 326 aa14.49□□□□□ -0.09
TRAM1-201ENST00000262213 ACTL6BO94805 426 aa14.49□□□□□ -0.09
TRAM1-201ENST00000262213 TPPP2P59282 170 aa14.49□□□□□ -0.09
TRAM1-201ENST00000262213 Q8TCH9 128 aa14.49□□□□□ -0.09
TRAM1-201ENST00000262213 SEPSECSQ9HD40 501 aaKnown RBP14.49□□□□□ -0.09
TRAM1-201ENST00000262213 PROP1O75360 226 aa14.48□□□□□ -0.09
TRAM1-201ENST00000262213 CXorf1O96002 111 aa14.48□□□□□ -0.09
TRAM1-201ENST00000262213 LINC00310P59036 64 aa14.48□□□□□ -0.09
TRAM1-201ENST00000262213 SLC35B1P78383 322 aa14.48□□□□□ -0.09
TRAM1-201ENST00000262213 ALKBH2Q6NS38 261 aa14.48□□□□□ -0.09
TRAM1-201ENST00000262213 DEFB123Q8N688 67 aa14.48□□□□□ -0.09
TRAM1-201ENST00000262213 HINT2Q9BX68 163 aa14.48□□□□□ -0.09
TRAM1-201ENST00000262213 HEATR1Q9H583 2144 aaKnown RBP14.48□□□□□ -0.09
TRAM1-201ENST00000262213 IQCF6A8MYZ5 107 aa14.48□□□□□ -0.09
TRAM1-201ENST00000262213 TIMM8AO60220 97 aaPredicted RBP14.48□□□□□ -0.09
TRAM1-201ENST00000262213 SP1P08047 785 aa14.48□□□□□ -0.09
TRAM1-201ENST00000262213 STAG3L2P0CL84 134 aa14.48□□□□□ -0.09
TRAM1-201ENST00000262213 STAG3L3P0CL85 134 aa14.48□□□□□ -0.09
TRAM1-201ENST00000262213 IRF2P14316 349 aa14.48□□□□□ -0.09
TRAM1-201ENST00000262213 IGHV1-2P23083 117 aa14.48□□□□□ -0.09
TRAM1-201ENST00000262213 KRTCAP3Q53RY4 240 aa14.48□□□□□ -0.09
TRAM1-201ENST00000262213 SPRR3Q9UBC9 169 aa14.48□□□□□ -0.09
TRAM1-201ENST00000262213 ICE1Q9Y2F5 2266 aa14.48□□□□□ -0.09
TRAM1-201ENST00000262213 SPINT2O43291 252 aa14.47□□□□□ -0.09
TRAM1-201ENST00000262213 DUTP33316 252 aaKnown RBP14.47□□□□□ -0.09
TRAM1-201ENST00000262213 OPRK1P41145 380 aa14.47□□□□□ -0.09
TRAM1-201ENST00000262213 RAB1CQ92928 201 aa14.47□□□□□ -0.09
TRAM1-201ENST00000262213 LEAP2Q969E1 77 aa14.47□□□□□ -0.09
TRAM1-201ENST00000262213 BTF3L4Q96K17 158 aa14.47□□□□□ -0.09
TRAM1-201ENST00000262213 HES4Q9HCC6 221 aa14.47□□□□□ -0.09
TRAM1-201ENST00000262213 RNFT1Q5M7Z0 435 aa14.47□□□□□ -0.09
TRAM1-201ENST00000262213 WDR82Q6UXN9 313 aa14.47□□□□□ -0.09
TRAM1-201ENST00000262213 SVILO95425 2214 aa14.46□□□□□ -0.09
TRAM1-201ENST00000262213 SNURFLB1AK76 121 aa14.46□□□□□ -0.09
TRAM1-201ENST00000262213 GCHFRP30047 84 aa14.46□□□□□ -0.09
TRAM1-201ENST00000262213 GABRA6Q16445 453 aa14.46□□□□□ -0.09
TRAM1-201ENST00000262213 KIAA1644Q3SXP7 199 aa14.46□□□□□ -0.09
TRAM1-201ENST00000262213 ATP1A1-AS1Q5TC04 95 aa14.46□□□□□ -0.09
TRAM1-201ENST00000262213 TMEM68Q96MH6 324 aa14.46□□□□□ -0.09
TRAM1-201ENST00000262213 COL6A3P12111 3177 aa14.46□□□□□ -0.09
TRAM1-201ENST00000262213 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.46□□□□□ -0.09
TRAM1-201ENST00000262213 IL6RP08887 468 aaPredicted RBP14.46□□□□□ -0.09
TRAM1-201ENST00000262213 YPEL3P61236 119 aaPredicted RBP14.46□□□□□ -0.09
TRAM1-201ENST00000262213 CNEP1R1Q8N9A8 125 aa14.46□□□□□ -0.09
TRAM1-201ENST00000262213 OR4P4Q8NGL7 312 aa14.46□□□□□ -0.09
TRAM1-201ENST00000262213 FAM122AQ96E09 287 aa14.46□□□□□ -0.09
TRAM1-201ENST00000262213 KRTDAPP60985 99 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 ERVK-16P61578 105 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 OR8I2Q8N0Y5 310 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 IL36BQ9NZH7 164 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 PTPRBP23467 1997 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 TRGV5A0A0B4J1U4 118 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 C19orf67A6NJJ6 358 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 MYOD1P15172 320 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 TCL1AP56279 114 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 RPP30P78346 268 aaKnown RBP14.45□□□□□ -0.1
TRAM1-201ENST00000262213 TRIP6Q15654 476 aaKnown RBP14.45□□□□□ -0.1
TRAM1-201ENST00000262213 UTF1Q5T230 341 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 TPTE2P1Q5T6R2 138 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 CD177Q8N6Q3 437 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 OR5AU1Q8NGC0 362 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 KLRC4-KLRK1H3BQV0 150 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 GFRA3O60609 400 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 CGAP01215 116 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 RPLP1P05386 114 aaKnown RBP14.45□□□□□ -0.1
TRAM1-201ENST00000262213 EFNB3Q15768 340 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 ZNF718Q3SXZ3 478 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 STPG3Q8N7X2 389 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 LRRC29Q8WV35 223 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 VAMP8Q9BV40 100 aa14.45□□□□□ -0.1
TRAM1-201ENST00000262213 IGHV3OR15-7A0A075B7D8 119 aa14.44□□□□□ -0.1
TRAM1-201ENST00000262213 HTD2P86397 168 aa14.44□□□□□ -0.1
TRAM1-201ENST00000262213 FXYD3Q14802 87 aa14.44□□□□□ -0.1
TRAM1-201ENST00000262213 TMEM208Q9BTX3 173 aa14.44□□□□□ -0.1
TRAM1-201ENST00000262213 CXXC4Q9H2H0 198 aa14.44□□□□□ -0.1
TRAM1-201ENST00000262213 TMEM140Q9NV12 185 aa14.44□□□□□ -0.1
TRAM1-201ENST00000262213 KLF13Q9Y2Y9 288 aaPredicted RBP14.44□□□□□ -0.1
TRAM1-201ENST00000262213 RNF114Q9Y508 228 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms