RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 GNG3P63215 75 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 STXBP6Q8NFX7 210 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 OR8G5Q8NG78 346 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 OR4A4PQ8NGN8 299 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 SDSLQ96GA7 329 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 SEBOXQ9HB31 216 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 SMCO4Q9NRQ5 59 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 RASL12Q9NYN1 266 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 JTBO76095 146 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 CNIH1O95406 144 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 IGHV3-7P01780 117 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 NPY4RP50391 375 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 CAV2P51636 162 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 CEBPGP53567 150 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 DEFA5Q01523 94 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 FCN2Q15485 313 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 LHFPL4Q7Z7J7 247 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 SVBPQ8N300 66 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 ARRDC1Q8N5I2 433 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 MAPK1IP1LQ8NDC0 245 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 OR4P4Q8NGL7 312 aa4.48□□□□□ -1.69
TOPBP1-201ENST00000260810 RANP62826 216 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 SLC35B1P78383 322 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 CYB5R2Q6BCY4 276 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 MUC15Q8N387 334 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 OR5R1Q8NH85 324 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 ELOVL1Q9BW60 279 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 OR14J1Q9UGF5 321 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 KPTNQ9Y664 436 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 TRBV20OR9-2A0A075B6H5 130 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM90A10PA6NDY2 464 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM90A7PA6NKC0 464 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM90A22PA8MWA6 464 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM90A23PA8MXZ1 464 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 CHST1O43916 411 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 FRMD6-AS1P0C7T7 363 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 UBE2G1P62253 170 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 GPR157Q5UAW9 335 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 STEAP1BQ6NZ63 245 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 ATRAIDQ6UW56 229 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 GLIPR1L1Q6UWM5 242 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 FJX1Q86VR8 437 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 OR2AK2Q8NG84 335 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 PRR7Q8TB68 274 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 COMMD5Q9GZQ3 224 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 ARL6Q9H0F7 186 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 HIF1ANQ9NWT6 349 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 FBXL17Q9UF56 701 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 MRPS12O15235 138 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 MT-ND4LP03901 98 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 GIPP09681 153 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 TMEM187Q14656 261 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 TMEM200BQ69YZ2 307 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 FAHD2BQ6P2I3 314 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 SLC51BQ86UW2 128 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 FAHD2AQ96GK7 314 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 NKX6-2Q9C056 277 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 TRGV8A0A0C4DH27 118 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 CRYM-AS1A6NIL9 109 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 NCBP2LA6PVI3 153 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 LGALS8O00214 317 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 CORTO00230 105 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 FCN1O00602 326 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 ARPC1BO15143 372 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 SERPINA2P20848 420 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 FPR2P25090 351 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 GZMKP49863 264 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 COTL1Q14019 142 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 NCR3LG1Q68D85 454 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 DPPA3Q6W0C5 159 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 HSD17B13Q7Z5P4 300 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 H1FOOQ8IZA3 346 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 ZDHHC22Q8N966 263 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 MARCH1Q8TCQ1 289 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 RSRP1Q9BUV0 290 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 AAMDCQ9H7C9 122 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 GAB2Q9UQC2 676 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 NSG2Q9Y328 171 aa4.47□□□□□ -1.69
TOPBP1-201ENST00000260810 ATP6V1G1O75348 118 aa4.46□□□□□ -1.69
TOPBP1-201ENST00000260810 KNG1P01042 644 aa4.46□□□□□ -1.69
TOPBP1-201ENST00000260810 PAFAH1B2P68402 229 aa4.46□□□□□ -1.69
TOPBP1-201ENST00000260810 TOR2AQ5JU69 321 aa4.46□□□□□ -1.69
TOPBP1-201ENST00000260810 VAX1Q5SQQ9 334 aa4.46□□□□□ -1.69
TOPBP1-201ENST00000260810 BHLHA15Q7RTS1 189 aaPredicted RBP4.46□□□□□ -1.69
TOPBP1-201ENST00000260810 TMEM229BQ8NBD8 167 aa4.46□□□□□ -1.69
TOPBP1-201ENST00000260810 CA5BP1Q8WTZ4 195 aa4.46□□□□□ -1.69
TOPBP1-201ENST00000260810 PCNPQ8WW12 178 aaKnown RBP4.46□□□□□ -1.69
TOPBP1-201ENST00000260810 H1FXQ92522 213 aaKnown RBP4.46□□□□□ -1.69
TOPBP1-201ENST00000260810 HINT2Q9BX68 163 aa4.46□□□□□ -1.69
TOPBP1-201ENST00000260810 TEX22C9J3V5 150 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 F2RL2O00254 374 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 ST8SIA3O43173 380 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 MBPP02686 304 aaPredicted RBP4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 TCRBP04435 133 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 SMIM17P0DL12 118 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 IDH3GP51553 393 aaPredicted RBP4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 RAG2P55895 527 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 OR2B8PP59922 312 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 BAXQ07812 192 aa4.46□□□□□ -1.7
TOPBP1-201ENST00000260810 DHRS2Q13268 280 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms