RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 OR10C1Q96KK4 312 aa16.52■□□□□ 0.24
RTCA-201ENST00000260563 RBM14Q96PK6 669 aaKnown RBP16.52■□□□□ 0.24
RTCA-201ENST00000260563 PDCD10Q9BUL8 212 aa16.52■□□□□ 0.24
RTCA-201ENST00000260563 A0A0G2JRQ6 117 aa16.51■□□□□ 0.23
RTCA-201ENST00000260563 PFDN1O60925 122 aa16.51■□□□□ 0.23
RTCA-201ENST00000260563 CCNKO75909 580 aa16.51■□□□□ 0.23
RTCA-201ENST00000260563 HRASP01112 189 aa16.51■□□□□ 0.23
RTCA-201ENST00000260563 RPL15P61313 204 aaKnown RBP16.51■□□□□ 0.23
RTCA-201ENST00000260563 ERVK-16P61578 105 aa16.51■□□□□ 0.23
RTCA-201ENST00000260563 DMBX1Q8NFW5 382 aa16.51■□□□□ 0.23
RTCA-201ENST00000260563 HARBI1Q96MB7 349 aa16.51■□□□□ 0.23
RTCA-201ENST00000260563 MOB4Q9Y3A3 225 aa16.51■□□□□ 0.23
RTCA-201ENST00000260563 MMP24Q9Y5R2 645 aa16.51■□□□□ 0.23
RTCA-201ENST00000260563 FAM181BA6NEQ2 426 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 RIPPLY3P57055 190 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 RPS16P62249 146 aaKnown RBP16.5■□□□□ 0.23
RTCA-201ENST00000260563 SSX9Q7RTT3 188 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 FAM219AQ8IW50 185 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 VKORC1L1Q8N0U8 176 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 Q8N6K4 173 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 GPR146Q96CH1 333 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 AIFM2Q9BRQ8 373 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 C2CD3Q4AC94 2353 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 SRRM4A7MD48 611 aaKnown RBP16.5■□□□□ 0.23
RTCA-201ENST00000260563 OR2A4O95047 310 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 CRYBA1P05813 215 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 P0C879 139 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 POU2AF1Q16633 256 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 IAH1Q2TAA2 248 aaPredicted RBP16.5■□□□□ 0.23
RTCA-201ENST00000260563 H2BFWTQ7Z2G1 175 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 RHOVQ96L33 236 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 C2orf50Q96LR7 162 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 OR2A7Q96R45 310 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 SPIN2AQ99865 258 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 SPIN2BQ9BPZ2 258 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 NEURL2Q9BR09 285 aa16.5■□□□□ 0.23
RTCA-201ENST00000260563 GIPP09681 153 aaPredicted RBP16.49■□□□□ 0.23
RTCA-201ENST00000260563 SRSF4Q08170 494 aaKnown RBP16.49■□□□□ 0.23
RTCA-201ENST00000260563 MMDQ15546 238 aa16.49■□□□□ 0.23
RTCA-201ENST00000260563 ASB13Q8WXK3 278 aa16.49■□□□□ 0.23
RTCA-201ENST00000260563 ST6GAL2Q96JF0 529 aa16.49■□□□□ 0.23
RTCA-201ENST00000260563 RITA1Q96K30 269 aa16.49■□□□□ 0.23
RTCA-201ENST00000260563 RNF5Q99942 180 aa16.49■□□□□ 0.23
RTCA-201ENST00000260563 RANBP3Q9H6Z4 567 aaPredicted RBP16.49■□□□□ 0.23
RTCA-201ENST00000260563 RANGRFQ9HD47 186 aaPredicted RBP16.49■□□□□ 0.23
RTCA-201ENST00000260563 TMEM140Q9NV12 185 aa16.49■□□□□ 0.23
RTCA-201ENST00000260563 NCBP2LA6PVI3 153 aaKnown RBP16.48■□□□□ 0.23
RTCA-201ENST00000260563 M0QZK8 103 aa16.48■□□□□ 0.23
RTCA-201ENST00000260563 SLC25A6P12236 298 aa16.48■□□□□ 0.23
RTCA-201ENST00000260563 LGALS7P47929 136 aa16.48■□□□□ 0.23
RTCA-201ENST00000260563 IZUMO4Q1ZYL8 232 aa16.48■□□□□ 0.23
RTCA-201ENST00000260563 THOC7Q6I9Y2 204 aaKnown RBP16.48■□□□□ 0.23
RTCA-201ENST00000260563 OR4A47Q6IF82 309 aa16.48■□□□□ 0.23
RTCA-201ENST00000260563 OR8H1Q8NGG4 311 aa16.48■□□□□ 0.23
RTCA-201ENST00000260563 WDR89Q96FK6 387 aaPredicted RBP16.48■□□□□ 0.23
RTCA-201ENST00000260563 NMES1Q9C002 83 aa16.48■□□□□ 0.23
RTCA-201ENST00000260563 NPFFR1Q9GZQ6 430 aa16.48■□□□□ 0.23
RTCA-201ENST00000260563 C1RLQ9NZP8 487 aa16.48■□□□□ 0.23
RTCA-201ENST00000260563 A0A1B0GU03 582 aa16.47■□□□□ 0.23
RTCA-201ENST00000260563 FGF16O43320 207 aa16.47■□□□□ 0.23
RTCA-201ENST00000260563 IGLV2-23P01705 113 aa16.47■□□□□ 0.23
RTCA-201ENST00000260563 CYCSP99999 105 aaKnown RBP16.47■□□□□ 0.23
RTCA-201ENST00000260563 SMCO1Q147U7 214 aa16.47■□□□□ 0.23
RTCA-201ENST00000260563 Q6ZRM9 215 aa16.47■□□□□ 0.23
RTCA-201ENST00000260563 ZBTB8BQ8NAP8 495 aaPredicted RBP16.47■□□□□ 0.23
RTCA-201ENST00000260563 FYTTD1Q96QD9 318 aaKnown RBP16.47■□□□□ 0.23
RTCA-201ENST00000260563 GSKIPQ9P0R6 139 aa16.47■□□□□ 0.23
RTCA-201ENST00000260563 CACNG5Q9UF02 275 aa16.47■□□□□ 0.23
RTCA-201ENST00000260563 NBR2O15453 112 aa16.46■□□□□ 0.23
RTCA-201ENST00000260563 SAA1P0DJI8 122 aaPredicted RBP16.46■□□□□ 0.23
RTCA-201ENST00000260563 TSNAXQ99598 290 aaKnown RBP16.46■□□□□ 0.23
RTCA-201ENST00000260563 KIAA1456Q9P272 454 aa16.46■□□□□ 0.23
RTCA-201ENST00000260563 OR9G9P0C7N8 305 aa16.45■□□□□ 0.22
RTCA-201ENST00000260563 CNTFRP26992 372 aa16.45■□□□□ 0.22
RTCA-201ENST00000260563 F2RL1P55085 397 aa16.45■□□□□ 0.22
RTCA-201ENST00000260563 UBE2KP61086 200 aa16.45■□□□□ 0.22
RTCA-201ENST00000260563 RAP2BP61225 183 aa16.45■□□□□ 0.22
RTCA-201ENST00000260563 CD300CQ08708 224 aa16.45■□□□□ 0.22
RTCA-201ENST00000260563 VMA21Q3ZAQ7 101 aa16.45■□□□□ 0.22
RTCA-201ENST00000260563 PUSL1Q8N0Z8 303 aaKnown RBP16.45■□□□□ 0.22
RTCA-201ENST00000260563 C5orf56Q8N8D9 126 aa16.45■□□□□ 0.22
RTCA-201ENST00000260563 VSTM2AQ8TAG5 236 aa16.45■□□□□ 0.22
RTCA-201ENST00000260563 COA4Q9NYJ1 87 aa16.45■□□□□ 0.22
RTCA-201ENST00000260563 BET1LQ9NYM9 111 aa16.45■□□□□ 0.22
RTCA-201ENST00000260563 PITX3O75364 302 aa16.45■□□□□ 0.22
RTCA-201ENST00000260563 IL6RP08887 468 aaPredicted RBP16.45■□□□□ 0.22
RTCA-201ENST00000260563 TCTE3Q8IZS6 198 aa16.45■□□□□ 0.22
RTCA-201ENST00000260563 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.45■□□□□ 0.22
RTCA-201ENST00000260563 NPBQ8NG41 125 aa16.45■□□□□ 0.22
RTCA-201ENST00000260563 OR4D5Q8NGN0 318 aa16.45■□□□□ 0.22
RTCA-201ENST00000260563 OR1S1Q8NH92 325 aa16.45■□□□□ 0.22
RTCA-201ENST00000260563 SLC25A17O43808 307 aa16.44■□□□□ 0.22
RTCA-201ENST00000260563 NDUFA3O95167 84 aa16.44■□□□□ 0.22
RTCA-201ENST00000260563 SPDEFO95238 335 aa16.44■□□□□ 0.22
RTCA-201ENST00000260563 IL15RAQ13261 267 aa16.44■□□□□ 0.22
RTCA-201ENST00000260563 PSG5Q15238 335 aa16.44■□□□□ 0.22
RTCA-201ENST00000260563 FAM71E2Q8N5Q1 922 aa16.44■□□□□ 0.22
RTCA-201ENST00000260563 Q8N9W7 124 aa16.44■□□□□ 0.22
RTCA-201ENST00000260563 OR2T35Q8NGX2 323 aa16.44■□□□□ 0.22
RTCA-201ENST00000260563 OR4A16Q8NH70 328 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms