RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 ZNF134P52741 427 aa13.48□□□□□ -0.25
SDCBP-201ENST00000260130 FOXL1Q12952 345 aa13.48□□□□□ -0.25
SDCBP-201ENST00000260130 CCDC144NLQ6NUI1 221 aa13.48□□□□□ -0.25
SDCBP-201ENST00000260130 SLC25A48Q6ZT89 311 aaKnown RBP13.48□□□□□ -0.25
SDCBP-201ENST00000260130 TOMM40LQ969M1 308 aa13.48□□□□□ -0.25
SDCBP-201ENST00000260130 YPEL1O60688 119 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 BRS3P32247 399 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 HLA-DRB3P79483 266 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 GNMTQ14749 295 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 CT45A1Q5HYN5 189 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 TMEM88Q6PEY1 159 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 LINC00518Q8N0U6 118 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 CT45A3Q8NHU0 189 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 YPEL2Q96QA6 119 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 TCF19Q9Y242 345 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 SLC31A2O15432 143 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 PPP1CCP36873 323 aaKnown RBP13.47□□□□□ -0.25
SDCBP-201ENST00000260130 CAV2P51636 162 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 SRSF3P84103 164 aaKnown RBP13.47□□□□□ -0.25
SDCBP-201ENST00000260130 RELBQ01201 579 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 DIAPH2-AS1Q14236 149 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 SMCO1Q147U7 214 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 LIAT1Q6ZQX7 453 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 SGPP2Q8IWX5 399 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 MAFIPQ8WZ33 124 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 SAV1Q9H4B6 383 aaPredicted RBP13.47□□□□□ -0.25
SDCBP-201ENST00000260130 PITPNC1Q9UKF7 332 aa13.47□□□□□ -0.25
SDCBP-201ENST00000260130 TRDCB7Z8K6 153 aa13.46□□□□□ -0.25
SDCBP-201ENST00000260130 FCGR3AP08637 254 aa13.46□□□□□ -0.25
SDCBP-201ENST00000260130 SCTP09683 121 aa13.46□□□□□ -0.25
SDCBP-201ENST00000260130 RAB7AP51149 207 aa13.46□□□□□ -0.25
SDCBP-201ENST00000260130 HRH4Q9H3N8 390 aa13.46□□□□□ -0.25
SDCBP-201ENST00000260130 A6NDX4 124 aa13.45□□□□□ -0.26
SDCBP-201ENST00000260130 NDUFA7O95182 113 aa13.45□□□□□ -0.26
SDCBP-201ENST00000260130 IFNA21P01568 189 aa13.45□□□□□ -0.26
SDCBP-201ENST00000260130 CTSDP07339 412 aaPredicted RBP13.45□□□□□ -0.26
SDCBP-201ENST00000260130 IL3RAP26951 378 aa13.45□□□□□ -0.26
SDCBP-201ENST00000260130 AWAT1Q58HT5 328 aa13.45□□□□□ -0.26
SDCBP-201ENST00000260130 C12orf54Q6X4T0 127 aa13.45□□□□□ -0.26
SDCBP-201ENST00000260130 STAB1Q9NY15 2570 aa13.45□□□□□ -0.26
SDCBP-201ENST00000260130 GAPDHP04406 335 aaKnown RBP13.45□□□□□ -0.26
SDCBP-201ENST00000260130 SULT1A2P50226 295 aa13.45□□□□□ -0.26
SDCBP-201ENST00000260130 IAH1Q2TAA2 248 aaPredicted RBP13.45□□□□□ -0.26
SDCBP-201ENST00000260130 RPL7L1Q6DKI1 246 aaKnown RBP13.45□□□□□ -0.26
SDCBP-201ENST00000260130 CBLN2Q8IUK8 224 aa13.45□□□□□ -0.26
SDCBP-201ENST00000260130 ST6GALNAC6Q969X2 333 aa13.45□□□□□ -0.26
SDCBP-201ENST00000260130 ZNF2Q9BSG1 426 aaPredicted RBP13.45□□□□□ -0.26
SDCBP-201ENST00000260130 TMEM231Q9H6L2 316 aa13.45□□□□□ -0.26
SDCBP-201ENST00000260130 ZFP57Q9NU63 452 aa13.45□□□□□ -0.26
SDCBP-201ENST00000260130 K7EPK0 472 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 HSD17B6O14756 317 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 MED6O75586 246 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 JTBO76095 146 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 CD24P25063 80 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 KIR2DS4P43632 304 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 ZNF816Q0VGE8 651 aaPredicted RBP13.44□□□□□ -0.26
SDCBP-201ENST00000260130 KIR2DS1Q14954 304 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 SRSF7Q16629 238 aaKnown RBP eCLIP13.44□□□□□ -0.26
SDCBP-201ENST00000260130 TMEM219Q86XT9 240 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 FAM71E2Q8N5Q1 922 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 OR4F5Q8NH21 305 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 ABHD14AQ9BUJ0 271 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 A0A1W2PPI3 338 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 TIMM23O14925 209 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 HSPA12AO43301 675 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 CHST1O43916 411 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 RPL12P30050 165 aaKnown RBP13.44□□□□□ -0.26
SDCBP-201ENST00000260130 CEACAM6P40199 344 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 ZNF137PP52743 207 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 PARP11Q9NR21 331 aa13.44□□□□□ -0.26
SDCBP-201ENST00000260130 TENM1Q9UKZ4 2725 aa13.43□□□□□ -0.26
SDCBP-201ENST00000260130 IGKV1-6A0A0C4DH72 117 aa13.43□□□□□ -0.26
SDCBP-201ENST00000260130 CRYM-AS1A6NIL9 109 aa13.43□□□□□ -0.26
SDCBP-201ENST00000260130 DEDDO75618 318 aa13.43□□□□□ -0.26
SDCBP-201ENST00000260130 MDKP21741 143 aaPredicted RBP13.43□□□□□ -0.26
SDCBP-201ENST00000260130 DTYMKP23919 212 aa13.43□□□□□ -0.26
SDCBP-201ENST00000260130 REG1BP48304 166 aa13.43□□□□□ -0.26
SDCBP-201ENST00000260130 Q6ZSV7 163 aa13.43□□□□□ -0.26
SDCBP-201ENST00000260130 FOXRED2Q8IWF2 684 aa13.43□□□□□ -0.26
SDCBP-201ENST00000260130 LYG1Q8N1E2 194 aa13.43□□□□□ -0.26
SDCBP-201ENST00000260130 DRAM1Q8N682 238 aa13.43□□□□□ -0.26
SDCBP-201ENST00000260130 OR1A1Q9P1Q5 309 aa13.43□□□□□ -0.26
SDCBP-201ENST00000260130 ANK2Q01484 3957 aa13.43□□□□□ -0.26
SDCBP-201ENST00000260130 FAM106CPP0CH98 169 aa13.42□□□□□ -0.26
SDCBP-201ENST00000260130 NPBWR1P48145 328 aa13.42□□□□□ -0.26
SDCBP-201ENST00000260130 HOXA1P49639 335 aaPredicted RBP13.42□□□□□ -0.26
SDCBP-201ENST00000260130 F2RL1P55085 397 aa13.42□□□□□ -0.26
SDCBP-201ENST00000260130 Q6ZS49 121 aa13.42□□□□□ -0.26
SDCBP-201ENST00000260130 THNSL2Q86YJ6 484 aa13.42□□□□□ -0.26
SDCBP-201ENST00000260130 RTN4IP1Q8WWV3 396 aaPredicted RBP13.42□□□□□ -0.26
SDCBP-201ENST00000260130 CFHR4Q92496 578 aa13.42□□□□□ -0.26
SDCBP-201ENST00000260130 PLEKHA2Q9HB19 425 aa13.42□□□□□ -0.26
SDCBP-201ENST00000260130 ANXA10Q9UJ72 324 aa13.42□□□□□ -0.26
SDCBP-201ENST00000260130 MMP24Q9Y5R2 645 aa13.42□□□□□ -0.26
SDCBP-201ENST00000260130 IGHV1-3A0A0C4DH29 117 aa13.42□□□□□ -0.26
SDCBP-201ENST00000260130 A0A1B0GUS0 222 aa13.42□□□□□ -0.26
SDCBP-201ENST00000260130 FAM90A9PA6NNJ1 464 aa13.42□□□□□ -0.26
SDCBP-201ENST00000260130 LPAR6P43657 344 aa13.42□□□□□ -0.26
SDCBP-201ENST00000260130 HERPUD1Q15011 391 aa13.42□□□□□ -0.26
SDCBP-201ENST00000260130 TMEM268Q5VZI3 342 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms