RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 TMEM167AQ8TBQ9 72 aa13.93□□□□□ -0.18
SNRPA1-201ENST00000254193 TMEM68Q96MH6 324 aa13.93□□□□□ -0.18
SNRPA1-201ENST00000254193 RBM38Q9H0Z9 239 aaKnown RBP13.93□□□□□ -0.18
SNRPA1-201ENST00000254193 CMYA5Q8N3K9 4069 aa13.92□□□□□ -0.18
SNRPA1-201ENST00000254193 GABARAPH6UMI1 98 aa13.92□□□□□ -0.18
SNRPA1-201ENST00000254193 MPPED1O15442 326 aa13.92□□□□□ -0.18
SNRPA1-201ENST00000254193 S1PR2O95136 353 aa13.92□□□□□ -0.18
SNRPA1-201ENST00000254193 HPRT1P00492 218 aa13.92□□□□□ -0.18
SNRPA1-201ENST00000254193 IFNA6P05013 189 aa13.92□□□□□ -0.18
SNRPA1-201ENST00000254193 FHL3Q13643 280 aa13.92□□□□□ -0.18
SNRPA1-201ENST00000254193 IL18Q14116 193 aa13.92□□□□□ -0.18
SNRPA1-201ENST00000254193 FOXB2Q5VYV0 432 aa13.92□□□□□ -0.18
SNRPA1-201ENST00000254193 OR4D10Q8NGI6 311 aa13.92□□□□□ -0.18
SNRPA1-201ENST00000254193 CD300LFQ8TDQ1 290 aa13.92□□□□□ -0.18
SNRPA1-201ENST00000254193 NXF2Q9GZY0 626 aaKnown RBP13.92□□□□□ -0.18
SNRPA1-201ENST00000254193 SLA2Q9H6Q3 261 aa13.92□□□□□ -0.18
SNRPA1-201ENST00000254193 DUS4LO95620 317 aaKnown RBP13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 RPA2P15927 270 aa13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 TNFSF8P32971 234 aa13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 TAS2R31P59538 309 aa13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 PDLIM3Q53GG5 364 aaPredicted RBP13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 OR4A47Q6IF82 309 aa13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 LPCAT3Q6P1A2 487 aa13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 TMEM229BQ8NBD8 167 aa13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 SMIM4Q8WVI0 70 aa13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 DGCR14Q96DF8 476 aaKnown RBP13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 SPIN2AQ99865 258 aa13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 SPIN2BQ9BPZ2 258 aa13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 RSRP1Q9BUV0 290 aa13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 PLEKHA2Q9HB19 425 aa13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 HRASLSQ9HDD0 168 aa13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 COA4Q9NYJ1 87 aa13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 RSL24D1Q9UHA3 163 aaKnown RBP13.91□□□□□ -0.18
SNRPA1-201ENST00000254193 TRAV3A0A0B4J244 114 aa13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 HMX3A6NHT5 357 aa13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 H3BUA1 57 aa13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 CD74P04233 296 aa13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 IL6RP08887 468 aaPredicted RBP13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 LGALS1P09382 135 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 MYOD1P15172 320 aa13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 NQO2P16083 231 aa13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 TBPP20226 339 aa13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 F2RP25116 425 aa13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 LPAR6P43657 344 aa13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 UCP3P55916 312 aa13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 MRPS10P82664 201 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 DEFA5Q01523 94 aa13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 ZNF616Q08AN1 781 aa13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 SLC38A6Q8IZM9 456 aa13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 ADAD2Q8NCV1 583 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 DPF1Q92782 380 aa13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 AIFM2Q9BRQ8 373 aa13.9□□□□□ -0.18
SNRPA1-201ENST00000254193 A0A1B0GW64 132 aa13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 E7EUB6 86 aa13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 RAB3DO95716 219 aa13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 OR9G9P0C7N8 305 aa13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 HOXD3P31249 432 aaPredicted RBP13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 RPL27AP46776 148 aaKnown RBP13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 TAS2R19P59542 299 aa13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 RPL8P62917 257 aaKnown RBP13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 POU2AF1Q16633 256 aa13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 ZNF585BQ52M93 769 aa13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 STEAP1BQ6NZ63 245 aa13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 TBC1D26Q86UD7 250 aa13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 ARRDC1Q8N5I2 433 aa13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 DMBX1Q8NFW5 382 aa13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 FYTTD1Q96QD9 318 aaKnown RBP13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 MCRIP2Q9BUT9 160 aaKnown RBP13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 TMEM140Q9NV12 185 aa13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 BET1LQ9NYM9 111 aa13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 COMMD9Q9P000 198 aa13.89□□□□□ -0.19
SNRPA1-201ENST00000254193 IGHV4OR15-8A0A075B7B6 117 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 A0A087WW49 117 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 C13orf42A0A1B0GVH6 325 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 TEX22C9J3V5 150 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 UPK2O00526 184 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 CTDSPLO15194 276 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 RBMXL2O75526 392 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 PRH1P02810 166 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 OR8U8P0C7N1 319 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 PGAM2P15259 253 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 HLA-GP17693 338 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 PI3P19957 117 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 S100GP29377 79 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 MAS1LP35410 378 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 SSBP1Q04837 148 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 FAAP20Q6NZ36 180 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 LHFPL1Q86WI0 220 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 OR4A5Q8NH83 315 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 SOSTQ9BQB4 213 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 RABL2AQ9UBK7 228 aaPredicted RBP13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 RABL2BQ9UNT1 228 aa13.88□□□□□ -0.19
SNRPA1-201ENST00000254193 FABP12A6NFH5 140 aa13.87□□□□□ -0.19
SNRPA1-201ENST00000254193 LINC01619G3V211 115 aa13.87□□□□□ -0.19
SNRPA1-201ENST00000254193 BRI3O95415 125 aa13.87□□□□□ -0.19
SNRPA1-201ENST00000254193 KRASP01116 189 aa13.87□□□□□ -0.19
SNRPA1-201ENST00000254193 PPP5CP53041 499 aa13.87□□□□□ -0.19
SNRPA1-201ENST00000254193 KRTAP10-11P60412 298 aa13.87□□□□□ -0.19
SNRPA1-201ENST00000254193 TTC9CQ8N5M4 171 aa13.87□□□□□ -0.19
SNRPA1-201ENST00000254193 SLC2A9Q9NRM0 540 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms