RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 CNIH1O95406 144 aa10.4□□□□□ -0.74
PHGDH-220ENST00000641570 DUS4LO95620 317 aaKnown RBP10.4□□□□□ -0.74
PHGDH-220ENST00000641570 KRASP01116 189 aa10.4□□□□□ -0.74
PHGDH-220ENST00000641570 IGKV1-16P04430 117 aa10.4□□□□□ -0.74
PHGDH-220ENST00000641570 IL5P05113 134 aa10.4□□□□□ -0.74
PHGDH-220ENST00000641570 HABP2Q14520 560 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-220ENST00000641570 LDLRAD2Q5SZI1 272 aa10.4□□□□□ -0.74
PHGDH-220ENST00000641570 DDB2Q92466 427 aa10.4□□□□□ -0.74
PHGDH-220ENST00000641570 IL22RA2Q969J5 263 aa10.4□□□□□ -0.74
PHGDH-220ENST00000641570 TMEM230Q96A57 120 aa10.4□□□□□ -0.74
PHGDH-220ENST00000641570 RBM14Q96PK6 669 aaKnown RBP10.4□□□□□ -0.74
PHGDH-220ENST00000641570 MARVELD1Q9BSK0 173 aa10.4□□□□□ -0.74
PHGDH-220ENST00000641570 NPFFR1Q9GZQ6 430 aa10.4□□□□□ -0.74
PHGDH-220ENST00000641570 SOX21Q9Y651 276 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-220ENST00000641570 CSPG4Q6UVK1 2322 aa10.4□□□□□ -0.74
PHGDH-220ENST00000641570 DNAJC9-AS1A6NH13 148 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 FAM25EA8MYX2 175 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 SLC25A17O43808 307 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 OR2A4O95047 310 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 UCP1P25874 307 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 LINC00205P59089 165 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 UBE2KP61086 200 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 GNB1P62873 340 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 EIF4EBP1Q13541 118 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-220ENST00000641570 TATDN3Q17R31 274 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 FAM219AQ8IW50 185 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 MRPL41Q8IXM3 137 aaKnown RBP10.39□□□□□ -0.75
PHGDH-220ENST00000641570 C12orf45Q8N5I9 185 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-220ENST00000641570 OR4A5Q8NH83 315 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 CHPT1Q8WUD6 406 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 RHOVQ96L33 236 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 DUX5Q96PT3 197 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 OR2A7Q96R45 310 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 CLCC1Q96S66 551 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 SEC22CQ9BRL7 303 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 CACFD1Q9UGQ2 172 aa10.39□□□□□ -0.75
PHGDH-220ENST00000641570 SNRPGP15A8MWD9 76 aa10.38□□□□□ -0.75
PHGDH-220ENST00000641570 RRHO14718 337 aa10.38□□□□□ -0.75
PHGDH-220ENST00000641570 FGF16O43320 207 aa10.38□□□□□ -0.75
PHGDH-220ENST00000641570 PROP1O75360 226 aa10.38□□□□□ -0.75
PHGDH-220ENST00000641570 G6PCP35575 357 aa10.38□□□□□ -0.75
PHGDH-220ENST00000641570 HILS1P60008 231 aa10.38□□□□□ -0.75
PHGDH-220ENST00000641570 TMEM187Q14656 261 aa10.38□□□□□ -0.75
PHGDH-220ENST00000641570 OXA1LQ15070 435 aa10.38□□□□□ -0.75
PHGDH-220ENST00000641570 AJUBAQ96IF1 538 aa10.38□□□□□ -0.75
PHGDH-220ENST00000641570 ZNF48Q96MX3 618 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-220ENST00000641570 RANBP3Q9H6Z4 567 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-220ENST00000641570 ENY2Q9NPA8 101 aa10.38□□□□□ -0.75
PHGDH-220ENST00000641570 TMEM140Q9NV12 185 aa10.38□□□□□ -0.75
PHGDH-220ENST00000641570 FKBP11Q9NYL4 201 aa10.38□□□□□ -0.75
PHGDH-220ENST00000641570 TMED3Q9Y3Q3 217 aa10.38□□□□□ -0.75
PHGDH-220ENST00000641570 A0A0B4J2A0 478 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 C5orf51A6NDU8 294 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 A6NDX4 124 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 FAM90A9PA6NNJ1 464 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 KCNAB3O43448 404 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 CDS2O95674 445 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 HOXB5P09067 269 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 SAA1P0DJI8 122 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-220ENST00000641570 VSIG10L2P0DP72 767 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 SPNP16150 400 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 VDAC1P21796 283 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 MECP2P51608 486 aaKnown RBP10.37□□□□□ -0.75
PHGDH-220ENST00000641570 EBI3Q14213 229 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 PSG5Q15238 335 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 MMD2Q8IY49 270 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 SLC35G3Q8N808 338 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 TEX45Q8NA69 505 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 OR52B4Q8NGK2 314 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 OR1S1Q8NH92 325 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 MITD1Q8WV92 249 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 TMEM56Q96MV1 263 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 COMMD5Q9GZQ3 224 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 MED28Q9H204 178 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 PRDM13Q9H4Q3 707 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 SHPKQ9UHJ6 478 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 PRNDQ9UKY0 176 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 TMEM56-RWDD3S4R434 201 aa10.37□□□□□ -0.75
PHGDH-220ENST00000641570 ZNF469Q96JG9 3925 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-220ENST00000641570 C13orf42A0A1B0GVH6 325 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 CLDN34H7C241 214 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 WRBO00258 174 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 GPR137BO60478 399 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 KBTBD11O94819 623 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 RPL15P61313 204 aaKnown RBP10.36□□□□□ -0.75
PHGDH-220ENST00000641570 RPL8P62917 257 aaKnown RBP10.36□□□□□ -0.75
PHGDH-220ENST00000641570 SUPT4H1P63272 117 aaKnown RBP10.36□□□□□ -0.75
PHGDH-220ENST00000641570 TNXAQ16473 311 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 C5orf64Q2M2E5 130 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 OR4A47Q6IF82 309 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 GSG1LQ6UXU4 331 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 PPP1R27Q86WC6 154 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 SELENOHQ8IZQ5 122 aaKnown RBP10.36□□□□□ -0.75
PHGDH-220ENST00000641570 VKORC1L1Q8N0U8 176 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 NPBQ8NG41 125 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 GLYATL2Q8WU03 294 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 LSM10Q969L4 123 aaKnown RBP10.36□□□□□ -0.75
PHGDH-220ENST00000641570 CHIAQ9BZP6 476 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 PRSS22Q9GZN4 317 aa10.36□□□□□ -0.75
PHGDH-220ENST00000641570 OR51J1Q9H342 316 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 225 ms