RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 HOGA1Q86XE5 327 aa19.41■□□□□ 0.7
VEGFA-230ENST00000640482 GVQW1Q8N7I0 195 aa19.41■□□□□ 0.7
VEGFA-230ENST00000640482 TSPAN14Q8NG11 270 aa19.41■□□□□ 0.7
VEGFA-230ENST00000640482 OR4S2Q8NH73 311 aa19.41■□□□□ 0.7
VEGFA-230ENST00000640482 TCTEX1D2Q8WW35 142 aa19.41■□□□□ 0.7
VEGFA-230ENST00000640482 SRSF12Q8WXF0 261 aaKnown RBP19.41■□□□□ 0.7
VEGFA-230ENST00000640482 AUNIPQ9H7T9 357 aa19.41■□□□□ 0.7
VEGFA-230ENST00000640482 MPPED1O15442 326 aa19.4■□□□□ 0.7
VEGFA-230ENST00000640482 ZP3P21754 424 aa19.4■□□□□ 0.7
VEGFA-230ENST00000640482 CBX5P45973 191 aa19.4■□□□□ 0.7
VEGFA-230ENST00000640482 ZNF66Q6ZN08 573 aa19.4■□□□□ 0.7
VEGFA-230ENST00000640482 MMD2Q8IY49 270 aa19.4■□□□□ 0.7
VEGFA-230ENST00000640482 OR6Q1Q8NGQ2 317 aa19.4■□□□□ 0.7
VEGFA-230ENST00000640482 OR4C12Q96R67 309 aa19.4■□□□□ 0.7
VEGFA-230ENST00000640482 ELOVL1Q9BW60 279 aa19.4■□□□□ 0.7
VEGFA-230ENST00000640482 ZNF430Q9H8G1 570 aaPredicted RBP19.4■□□□□ 0.7
VEGFA-230ENST00000640482 NHLRC4P0CG21 123 aaPredicted RBP19.39■□□□□ 0.69
VEGFA-230ENST00000640482 APELAP0DMC3 54 aa19.39■□□□□ 0.69
VEGFA-230ENST00000640482 YIPF6Q96EC8 236 aa19.39■□□□□ 0.69
VEGFA-230ENST00000640482 USMG5Q96IX5 58 aa19.39■□□□□ 0.69
VEGFA-230ENST00000640482 OR9G9P0C7N8 305 aa19.38■□□□□ 0.69
VEGFA-230ENST00000640482 FCGR2CP31995 323 aa19.38■□□□□ 0.69
VEGFA-230ENST00000640482 TGFBR1P36897 503 aa19.38■□□□□ 0.69
VEGFA-230ENST00000640482 EIF4EBP1Q13541 118 aaPredicted RBP19.38■□□□□ 0.69
VEGFA-230ENST00000640482 MSMO1Q15800 293 aa19.38■□□□□ 0.69
VEGFA-230ENST00000640482 MFSD4AQ8N468 514 aa19.38■□□□□ 0.69
VEGFA-230ENST00000640482 VSTM2AQ8TAG5 236 aa19.38■□□□□ 0.69
VEGFA-230ENST00000640482 SECTM1Q8WVN6 248 aa19.38■□□□□ 0.69
VEGFA-230ENST00000640482 S100A16Q96FQ6 103 aaKnown RBP19.38■□□□□ 0.69
VEGFA-230ENST00000640482 SPIN2AQ99865 258 aa19.38■□□□□ 0.69
VEGFA-230ENST00000640482 SPIN2BQ9BPZ2 258 aa19.38■□□□□ 0.69
VEGFA-230ENST00000640482 DNAH9Q9NYC9 4486 aa19.38■□□□□ 0.69
VEGFA-230ENST00000640482 TAS2R8Q9NYW2 309 aa19.38■□□□□ 0.69
VEGFA-230ENST00000640482 ANKRD34BA5PLL1 514 aa19.37■□□□□ 0.69
VEGFA-230ENST00000640482 XRCC3O43542 346 aa19.37■□□□□ 0.69
VEGFA-230ENST00000640482 UBE2NLQ5JXB2 153 aa19.37■□□□□ 0.69
VEGFA-230ENST00000640482 ADAD2Q8NCV1 583 aaKnown RBP19.37■□□□□ 0.69
VEGFA-230ENST00000640482 OR13F1Q8NGS4 319 aa19.37■□□□□ 0.69
VEGFA-230ENST00000640482 PPYP01298 95 aa19.36■□□□□ 0.69
VEGFA-230ENST00000640482 RPS19P39019 145 aaKnown RBP19.36■□□□□ 0.69
VEGFA-230ENST00000640482 KIR2DS2P43631 304 aa19.36■□□□□ 0.69
VEGFA-230ENST00000640482 LSM3P62310 102 aaKnown RBP19.36■□□□□ 0.69
VEGFA-230ENST00000640482 ZBTB34Q8NCN2 500 aa19.36■□□□□ 0.69
VEGFA-230ENST00000640482 SMAD5-AS1Q9Y6J3 95 aa19.36■□□□□ 0.69
VEGFA-230ENST00000640482 OR2A4O95047 310 aa19.35■□□□□ 0.69
VEGFA-230ENST00000640482 PTHLHP12272 177 aa19.35■□□□□ 0.69
VEGFA-230ENST00000640482 SPNP16150 400 aa19.35■□□□□ 0.69
VEGFA-230ENST00000640482 DEFA5Q01523 94 aa19.35■□□□□ 0.69
VEGFA-230ENST00000640482 DYRK1AQ13627 763 aa19.35■□□□□ 0.69
VEGFA-230ENST00000640482 ZNF343Q6P1L6 599 aa19.35■□□□□ 0.69
VEGFA-230ENST00000640482 VKORC1L1Q8N0U8 176 aa19.35■□□□□ 0.69
VEGFA-230ENST00000640482 OR5AP2Q8NGF4 316 aa19.35■□□□□ 0.69
VEGFA-230ENST00000640482 OR2A7Q96R45 310 aa19.35■□□□□ 0.69
VEGFA-230ENST00000640482 IFT46Q9NQC8 304 aa19.35■□□□□ 0.69
VEGFA-230ENST00000640482 CCL28Q9NRJ3 127 aa19.35■□□□□ 0.69
VEGFA-230ENST00000640482 PEF1Q9UBV8 284 aaKnown RBP19.35■□□□□ 0.69
VEGFA-230ENST00000640482 KBTBD11O94819 623 aa19.34■□□□□ 0.69
VEGFA-230ENST00000640482 FCER2P06734 321 aa19.34■□□□□ 0.69
VEGFA-230ENST00000640482 GP9P14770 177 aa19.34■□□□□ 0.69
VEGFA-230ENST00000640482 SLC25A42Q86VD7 318 aa19.34■□□□□ 0.69
VEGFA-230ENST00000640482 SNAPC3Q92966 411 aa19.34■□□□□ 0.69
VEGFA-230ENST00000640482 FAM223BA6NKX1 122 aa19.33■□□□□ 0.68
VEGFA-230ENST00000640482 TNFSF12O43508 249 aa19.33■□□□□ 0.68
VEGFA-230ENST00000640482 HRASP01112 189 aa19.33■□□□□ 0.68
VEGFA-230ENST00000640482 FAM223AQ8IWN6 122 aa19.33■□□□□ 0.68
VEGFA-230ENST00000640482 PUSL1Q8N0Z8 303 aaKnown RBP19.33■□□□□ 0.68
VEGFA-230ENST00000640482 SAMD12Q8N8I0 201 aa19.33■□□□□ 0.68
VEGFA-230ENST00000640482 RSRP1Q9BUV0 290 aa19.33■□□□□ 0.68
VEGFA-230ENST00000640482 SLC5A7Q9GZV3 580 aa19.33■□□□□ 0.68
VEGFA-230ENST00000640482 MEIS3P1A6NDR6 274 aa19.32■□□□□ 0.68
VEGFA-230ENST00000640482 MAS1LP35410 378 aa19.32■□□□□ 0.68
VEGFA-230ENST00000640482 BRWD1-AS2P59051 145 aa19.32■□□□□ 0.68
VEGFA-230ENST00000640482 FXYD4P59646 89 aa19.32■□□□□ 0.68
VEGFA-230ENST00000640482 RHOGP84095 191 aa19.32■□□□□ 0.68
VEGFA-230ENST00000640482 KLF5Q13887 457 aaPredicted RBP19.32■□□□□ 0.68
VEGFA-230ENST00000640482 TMEM69Q5SWH9 247 aa19.32■□□□□ 0.68
VEGFA-230ENST00000640482 C10orf55Q5SWW7 151 aa19.32■□□□□ 0.68
VEGFA-230ENST00000640482 ANKRD13BQ86YJ7 626 aa19.32■□□□□ 0.68
VEGFA-230ENST00000640482 TTC9CQ8N5M4 171 aa19.32■□□□□ 0.68
VEGFA-230ENST00000640482 TMEM167AQ8TBQ9 72 aa19.32■□□□□ 0.68
VEGFA-230ENST00000640482 GIMAP1Q8WWP7 306 aa19.32■□□□□ 0.68
VEGFA-230ENST00000640482 AIFM2Q9BRQ8 373 aa19.32■□□□□ 0.68
VEGFA-230ENST00000640482 COL7A1Q02388 2944 aa19.32■□□□□ 0.68
VEGFA-230ENST00000640482 CATR1Q13166 79 aa19.31■□□□□ 0.68
VEGFA-230ENST00000640482 TATDN3Q17R31 274 aa19.31■□□□□ 0.68
VEGFA-230ENST00000640482 OR9G4Q8NGQ1 327 aa19.31■□□□□ 0.68
VEGFA-230ENST00000640482 KCTD12Q96CX2 325 aaKnown RBP19.31■□□□□ 0.68
VEGFA-230ENST00000640482 WWC2-AS2Q96NR7 200 aa19.31■□□□□ 0.68
VEGFA-230ENST00000640482 GPHA2Q96T91 129 aa19.31■□□□□ 0.68
VEGFA-230ENST00000640482 AKIP1Q9NQ31 210 aa19.31■□□□□ 0.68
VEGFA-230ENST00000640482 TRBV9A0A0B4J1U6 114 aa19.3■□□□□ 0.68
VEGFA-230ENST00000640482 RBMXL2O75526 392 aaKnown RBP19.3■□□□□ 0.68
VEGFA-230ENST00000640482 RPL27AP46776 148 aaKnown RBP19.3■□□□□ 0.68
VEGFA-230ENST00000640482 SYNJ2BPP57105 145 aa19.3■□□□□ 0.68
VEGFA-230ENST00000640482 TAS2R20P59543 309 aa19.3■□□□□ 0.68
VEGFA-230ENST00000640482 HERV-K104P61576 105 aa19.3■□□□□ 0.68
VEGFA-230ENST00000640482 ATP5G2Q06055 141 aa19.3■□□□□ 0.68
VEGFA-230ENST00000640482 RPEL1Q2QD12 228 aa19.3■□□□□ 0.68
VEGFA-230ENST00000640482 SPAG16Q8N0X2 631 aa19.3■□□□□ 0.68
VEGFA-230ENST00000640482 BORCS5Q969J3 196 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms