RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 TRBV24-1A0A075B6N3 115 aa14.29□□□□□ -0.12
NEK3-206ENST00000611833 SEC14L6B5MCN3 397 aa14.29□□□□□ -0.12
NEK3-206ENST00000611833 PPP1R2P9O14990 202 aa14.29□□□□□ -0.12
NEK3-206ENST00000611833 PAGE4O60829 102 aa14.29□□□□□ -0.12
NEK3-206ENST00000611833 DEFA4P12838 97 aa14.29□□□□□ -0.12
NEK3-206ENST00000611833 CDC34P49427 236 aaPredicted RBP14.29□□□□□ -0.12
NEK3-206ENST00000611833 C4orf17Q53FE4 359 aa14.29□□□□□ -0.12
NEK3-206ENST00000611833 C16orf82Q7Z2V1 217 aa14.29□□□□□ -0.12
NEK3-206ENST00000611833 VKORC1L1Q8N0U8 176 aa14.29□□□□□ -0.12
NEK3-206ENST00000611833 LAMA5O15230 3695 aa14.28□□□□□ -0.12
NEK3-206ENST00000611833 LY86O95711 162 aa14.28□□□□□ -0.12
NEK3-206ENST00000611833 CRYAAP02489 173 aa14.28□□□□□ -0.12
NEK3-206ENST00000611833 MDKP21741 143 aaPredicted RBP14.28□□□□□ -0.12
NEK3-206ENST00000611833 SPCS3P61009 180 aa14.28□□□□□ -0.12
NEK3-206ENST00000611833 RPL23P62829 140 aaKnown RBP14.28□□□□□ -0.12
NEK3-206ENST00000611833 ZNF474Q6S9Z5 364 aaPredicted RBP14.28□□□□□ -0.12
NEK3-206ENST00000611833 ABHD5Q8WTS1 349 aa14.28□□□□□ -0.12
NEK3-206ENST00000611833 S100PBPQ96BU1 408 aa14.28□□□□□ -0.12
NEK3-206ENST00000611833 S1PR3Q99500 378 aa14.28□□□□□ -0.12
NEK3-206ENST00000611833 HEYLQ9NQ87 328 aaPredicted RBP14.28□□□□□ -0.12
NEK3-206ENST00000611833 CNOT1A5YKK6 2376 aaKnown RBP14.28□□□□□ -0.12
NEK3-206ENST00000611833 FAM90A9PA6NNJ1 464 aa14.27□□□□□ -0.12
NEK3-206ENST00000611833 SPRY3O43610 288 aa14.27□□□□□ -0.12
NEK3-206ENST00000611833 KLF3P57682 345 aaPredicted RBP14.27□□□□□ -0.12
NEK3-206ENST00000611833 NECAP1Q8NC96 275 aa14.27□□□□□ -0.12
NEK3-206ENST00000611833 MEGF10Q96KG7 1140 aa14.27□□□□□ -0.12
NEK3-206ENST00000611833 CFHR2P36980 270 aa14.27□□□□□ -0.13
NEK3-206ENST00000611833 ZNF134P52741 427 aa14.27□□□□□ -0.13
NEK3-206ENST00000611833 LOXL3P58215 753 aa14.27□□□□□ -0.13
NEK3-206ENST00000611833 PDZD11Q5EBL8 140 aa14.27□□□□□ -0.13
NEK3-206ENST00000611833 WDR83OSQ9Y284 106 aa14.27□□□□□ -0.13
NEK3-206ENST00000611833 FAM215AQ9Y5M1 114 aa14.27□□□□□ -0.13
NEK3-206ENST00000611833 ELOA3CA0A087WX78 387 aaPredicted RBP14.26□□□□□ -0.13
NEK3-206ENST00000611833 CR1LQ2VPA4 569 aa14.26□□□□□ -0.13
NEK3-206ENST00000611833 TIMM23BQ5SRD1 257 aa14.26□□□□□ -0.13
NEK3-206ENST00000611833 FAM216AQ8WUB2 273 aa14.26□□□□□ -0.13
NEK3-206ENST00000611833 NEIL1Q96FI4 390 aaPredicted RBP14.26□□□□□ -0.13
NEK3-206ENST00000611833 OR5B12Q96R08 314 aa14.26□□□□□ -0.13
NEK3-206ENST00000611833 H7BYZ3 331 aa14.26□□□□□ -0.13
NEK3-206ENST00000611833 F2RL2O00254 374 aa14.26□□□□□ -0.13
NEK3-206ENST00000611833 GFI1BQ5VTD9 330 aa14.26□□□□□ -0.13
NEK3-206ENST00000611833 OR10A7Q8NGE5 316 aa14.26□□□□□ -0.13
NEK3-206ENST00000611833 Q8TCH9 128 aa14.26□□□□□ -0.13
NEK3-206ENST00000611833 IFI27L2Q9H2X8 130 aa14.26□□□□□ -0.13
NEK3-206ENST00000611833 CALYQ9NYX4 217 aa14.26□□□□□ -0.13
NEK3-206ENST00000611833 ZNF318Q5VUA4 2279 aa14.26□□□□□ -0.13
NEK3-206ENST00000611833 A0A1W2PPV4 95 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 C11orf94C9JXX5 98 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 RBFOX2O43251 390 aaKnown RBP eCLIP14.25□□□□□ -0.13
NEK3-206ENST00000611833 SOD3P08294 240 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 GLRXP35754 106 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 AARDQ4LEZ3 155 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 IGFL3Q6UXB1 125 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 OR10D4PQ8NGN7 298 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 OR52E5Q8NH55 327 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 ITLN1Q8WWA0 313 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 GPR61Q9BZJ8 451 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 CADP27708 2225 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 TRAV38-1A0A0B4J264 116 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 GALR1P47211 349 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 PYY3Q5JQD4 70 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 GCSAMLQ5JQS6 135 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 HIST3H2BBQ8N257 126 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 DIRC2Q96SL1 478 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 TMEM140Q9NV12 185 aa14.25□□□□□ -0.13
NEK3-206ENST00000611833 RRHO14718 337 aa14.24□□□□□ -0.13
NEK3-206ENST00000611833 GYPAP02724 150 aa14.24□□□□□ -0.13
NEK3-206ENST00000611833 KIR2DS2P43631 304 aa14.24□□□□□ -0.13
NEK3-206ENST00000611833 Q8N7P7 452 aa14.24□□□□□ -0.13
NEK3-206ENST00000611833 LEAP2Q969E1 77 aa14.24□□□□□ -0.13
NEK3-206ENST00000611833 GAB2Q9UQC2 676 aa14.24□□□□□ -0.13
NEK3-206ENST00000611833 TRAV3A0A0B4J244 114 aa14.24□□□□□ -0.13
NEK3-206ENST00000611833 SLC31A2O15432 143 aa14.24□□□□□ -0.13
NEK3-206ENST00000611833 NDUFS6O75380 124 aaKnown RBP14.24□□□□□ -0.13
NEK3-206ENST00000611833 LHBP01229 141 aa14.24□□□□□ -0.13
NEK3-206ENST00000611833 PFN1P07737 140 aaKnown RBP14.24□□□□□ -0.13
NEK3-206ENST00000611833 RAB7AP51149 207 aa14.24□□□□□ -0.13
NEK3-206ENST00000611833 RELBQ01201 579 aa14.24□□□□□ -0.13
NEK3-206ENST00000611833 PDLIM3Q53GG5 364 aaPredicted RBP14.24□□□□□ -0.13
NEK3-206ENST00000611833 FAM201AQ5SY85 155 aa14.24□□□□□ -0.13
NEK3-206ENST00000611833 MPDU1O75352 247 aa14.23□□□□□ -0.13
NEK3-206ENST00000611833 SELLP14151 372 aa14.23□□□□□ -0.13
NEK3-206ENST00000611833 VDAC2P45880 294 aaPredicted RBP14.23□□□□□ -0.13
NEK3-206ENST00000611833 RTP5Q14D33 572 aa14.23□□□□□ -0.13
NEK3-206ENST00000611833 Q6ZS92 163 aa14.23□□□□□ -0.13
NEK3-206ENST00000611833 ABHD12Q8N2K0 398 aa14.23□□□□□ -0.13
NEK3-206ENST00000611833 OR4S2Q8NH73 311 aa14.23□□□□□ -0.13
NEK3-206ENST00000611833 SRD5A3Q9H8P0 318 aa14.23□□□□□ -0.13
NEK3-206ENST00000611833 PATZ1Q9HBE1 687 aaKnown RBP14.23□□□□□ -0.13
NEK3-206ENST00000611833 RAB9BQ9NP90 201 aa14.23□□□□□ -0.13
NEK3-206ENST00000611833 SOX15O60248 233 aa14.23□□□□□ -0.13
NEK3-206ENST00000611833 BMP5P22003 454 aa14.23□□□□□ -0.13
NEK3-206ENST00000611833 UBE2G2P60604 165 aa14.23□□□□□ -0.13
NEK3-206ENST00000611833 CST9LP1Q5W188 147 aa14.23□□□□□ -0.13
NEK3-206ENST00000611833 TREML4Q6UXN2 200 aa14.23□□□□□ -0.13
NEK3-206ENST00000611833 OR5T1Q8NG75 326 aa14.23□□□□□ -0.13
NEK3-206ENST00000611833 OR51G1Q8NGK1 321 aa14.23□□□□□ -0.13
NEK3-206ENST00000611833 ANAPC16Q96DE5 110 aa14.23□□□□□ -0.13
NEK3-206ENST00000611833 K7EM74 188 aa14.22□□□□□ -0.13
NEK3-206ENST00000611833 PHOX2AO14813 284 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms