RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 ZNF383Q8NA42 475 aa9.37□□□□□ -0.91
CTCFL-221ENST00000608903 ZBTB34Q8NCN2 500 aa9.37□□□□□ -0.91
CTCFL-221ENST00000608903 DCUN1D4Q92564 292 aa9.37□□□□□ -0.91
CTCFL-221ENST00000608903 TMEM186Q96B77 213 aa9.37□□□□□ -0.91
CTCFL-221ENST00000608903 ZANQ9Y493 2812 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 hCG_1809904A0A1W2PP81 198 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 A0A1W2PPE2 198 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 A0A1W2PR64 198 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 A0A1W2PRV1 198 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 BUB1B-PAK6H3BSN5 160 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 FGF16O43320 207 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 RAMP3O60896 148 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 IGKV1-39P01597 117 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 IGKV1D-39P04432 117 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 LYL1P12980 280 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 ZNF137PP52743 207 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 IAH1Q2TAA2 248 aaPredicted RBP9.36□□□□□ -0.91
CTCFL-221ENST00000608903 OR2B11Q5JQS5 317 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 CMTM1Q8IZ96 169 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 DYNAPQ8N1N2 210 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 BEND2Q8NDZ0 799 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 OR1S2Q8NGQ3 325 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 STOML3Q8TAV4 291 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 DDB2Q92466 427 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 LHX4Q969G2 390 aa9.36□□□□□ -0.91
CTCFL-221ENST00000608903 SOX21Q9Y651 276 aaPredicted RBP9.36□□□□□ -0.91
CTCFL-221ENST00000608903 IGHV3OR16-10A0A075B7F0 116 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 CENPVL3A0A0U1RRI6 287 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 TMEM218A2RU14 115 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 TGFAP01135 160 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 ARG1P05089 322 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 ZNF16P17020 682 aaPredicted RBP9.35□□□□□ -0.91
CTCFL-221ENST00000608903 PRSS54Q6PEW0 395 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 LYZL2Q7Z4W2 148 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 CCDC71LQ8N9Z2 235 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 OR13D1Q8NGV5 346 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 OR10X1Q8NGY0 326 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 FAM216AQ8WUB2 273 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 MRPL20Q9BYC9 149 aaKnown RBP9.35□□□□□ -0.91
CTCFL-221ENST00000608903 NOTCH2Q04721 2471 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 BAHCC1Q9P281 2608 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 MYO9AB2RTY4 2548 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 TRAV20A0A0B4J274 112 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 CYSRT1A8MQ03 144 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 SMAD7O15105 426 aaKnown RBP9.35□□□□□ -0.91
CTCFL-221ENST00000608903 ADCYAP1P18509 176 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 PRRX1P54821 245 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 KRTAP1-1Q07627 177 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 KLF17Q5JT82 389 aaPredicted RBP9.35□□□□□ -0.91
CTCFL-221ENST00000608903 C10orf91Q5T1B1 145 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 LIAT1Q6ZQX7 453 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 PIP4P2Q8N4L2 257 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 INO80EQ8NBZ0 244 aaPredicted RBP9.35□□□□□ -0.91
CTCFL-221ENST00000608903 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.35□□□□□ -0.91
CTCFL-221ENST00000608903 NARS2Q96I59 477 aaKnown RBP9.35□□□□□ -0.91
CTCFL-221ENST00000608903 C18orf12Q96KH6 178 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 TMEM222Q9H0R3 208 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 C7orf69Q9H7B7 122 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 KCNIP3Q9Y2W7 256 aa9.35□□□□□ -0.91
CTCFL-221ENST00000608903 H0Y980 276 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 IGHV4-38-2P0DP08 117 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 UCP1P25874 307 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 ARHGDIBP52566 201 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 S100A10P60903 97 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 ZNF66Q6ZN08 573 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 FOXRED2Q8IWF2 684 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 SELENOHQ8IZQ5 122 aaKnown RBP9.34□□□□□ -0.91
CTCFL-221ENST00000608903 PUSL1Q8N0Z8 303 aaKnown RBP9.34□□□□□ -0.91
CTCFL-221ENST00000608903 SVBPQ8N300 66 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 LRTM2Q8N967 370 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 TCTEX1D2Q8WW35 142 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 NABP2Q9BQ15 211 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 CYTL1Q9NRR1 136 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 CARHSP1Q9Y2V2 147 aaKnown RBP9.34□□□□□ -0.91
CTCFL-221ENST00000608903 CSPG4Q6UVK1 2322 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 FBLN7Q53RD9 439 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 RUSC1-AS1Q66K80 236 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 TMEM56Q96MV1 263 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 TSNAXQ99598 290 aaKnown RBP9.34□□□□□ -0.91
CTCFL-221ENST00000608903 HSD17B10Q99714 261 aaKnown RBP9.34□□□□□ -0.91
CTCFL-221ENST00000608903 TMEM56-RWDD3S4R434 201 aa9.34□□□□□ -0.91
CTCFL-221ENST00000608903 CREBBPQ92793 2442 aa9.33□□□□□ -0.92
CTCFL-221ENST00000608903 NUDT19A8MXV4 375 aa9.33□□□□□ -0.92
CTCFL-221ENST00000608903 CDS2O95674 445 aa9.33□□□□□ -0.92
CTCFL-221ENST00000608903 LPAR6P43657 344 aa9.33□□□□□ -0.92
CTCFL-221ENST00000608903 UBE2E1P51965 193 aa9.33□□□□□ -0.92
CTCFL-221ENST00000608903 ZNF816Q0VGE8 651 aaPredicted RBP9.33□□□□□ -0.92
CTCFL-221ENST00000608903 GUCA2BQ16661 112 aa9.33□□□□□ -0.92
CTCFL-221ENST00000608903 TPTE2P1Q5T6R2 138 aa9.33□□□□□ -0.92
CTCFL-221ENST00000608903 SPAG16Q8N0X2 631 aa9.33□□□□□ -0.92
CTCFL-221ENST00000608903 S1PR3Q99500 378 aa9.33□□□□□ -0.92
CTCFL-221ENST00000608903 SAV1Q9H4B6 383 aaPredicted RBP9.33□□□□□ -0.92
CTCFL-221ENST00000608903 CELSR1Q9NYQ6 3014 aa9.32□□□□□ -0.92
CTCFL-221ENST00000608903 IGHV3-72A0A0B4J1Y9 119 aa9.32□□□□□ -0.92
CTCFL-221ENST00000608903 A0A0G2JRQ6 117 aa9.32□□□□□ -0.92
CTCFL-221ENST00000608903 HOXA1P49639 335 aaPredicted RBP9.32□□□□□ -0.92
CTCFL-221ENST00000608903 DHRS7BQ6IAN0 325 aaPredicted RBP9.32□□□□□ -0.92
CTCFL-221ENST00000608903 SLC35G3Q8N808 338 aa9.32□□□□□ -0.92
CTCFL-221ENST00000608903 RITA1Q96K30 269 aa9.32□□□□□ -0.92
CTCFL-221ENST00000608903 AQP10Q96PS8 301 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms