RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 HIST1H1DP16402 221 aaKnown RBP13.51□□□□□ -0.25
SHKBP1-227ENST00000602011 DTYMKP23919 212 aa13.51□□□□□ -0.25
SHKBP1-227ENST00000602011 FABP5Q01469 135 aa13.51□□□□□ -0.25
SHKBP1-227ENST00000602011 CDK10Q15131 360 aa13.51□□□□□ -0.25
SHKBP1-227ENST00000602011 MRGPRG-AS1Q2M3A8 158 aa13.51□□□□□ -0.25
SHKBP1-227ENST00000602011 H1FOOQ8IZA3 346 aaPredicted RBP13.51□□□□□ -0.25
SHKBP1-227ENST00000602011 VSTM2AQ8TAG5 236 aa13.51□□□□□ -0.25
SHKBP1-227ENST00000602011 ACOT12Q8WYK0 555 aa13.51□□□□□ -0.25
SHKBP1-227ENST00000602011 AKIP1Q9NQ31 210 aa13.51□□□□□ -0.25
SHKBP1-227ENST00000602011 ZNF230Q9UIE0 474 aaPredicted RBP13.51□□□□□ -0.25
SHKBP1-227ENST00000602011 MRPS7Q9Y2R9 242 aaKnown RBP13.51□□□□□ -0.25
SHKBP1-227ENST00000602011 LGALS9O00182 355 aa13.5□□□□□ -0.25
SHKBP1-227ENST00000602011 MFNGO00587 321 aa13.5□□□□□ -0.25
SHKBP1-227ENST00000602011 TRBV12-3P01733 135 aa13.5□□□□□ -0.25
SHKBP1-227ENST00000602011 GALP22466 123 aa13.5□□□□□ -0.25
SHKBP1-227ENST00000602011 HSPA13P48723 471 aa13.5□□□□□ -0.25
SHKBP1-227ENST00000602011 ARFRP1Q13795 201 aa13.5□□□□□ -0.25
SHKBP1-227ENST00000602011 NEURL2Q9BR09 285 aa13.5□□□□□ -0.25
SHKBP1-227ENST00000602011 HIPK2Q9H2X6 1198 aa13.5□□□□□ -0.25
SHKBP1-227ENST00000602011 ZNF257Q9Y2Q1 563 aa13.5□□□□□ -0.25
SHKBP1-227ENST00000602011 PLECQ15149 4684 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 IFITM5A6NNB3 132 aa13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 BMPR1BO00238 502 aa13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 GGCTO75223 188 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 DHFRP00374 187 aa13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 GNB3P16520 340 aa13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 CD36P16671 472 aa13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 MAS1LP35410 378 aa13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 KIR2DS2P43631 304 aa13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 CD81P60033 236 aa13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 EXOSC2Q13868 293 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 DEFB114Q30KQ6 69 aa13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 HES5Q5TA89 166 aa13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 ZNF645Q8N7E2 425 aa13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 DYNLRB2Q8TF09 96 aa13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 DCUN1D5Q9BTE7 237 aa13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 CCDC90BQ9GZT6 254 aa13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 DCSTAMPQ9H295 470 aa13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 ZNF430Q9H8G1 570 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 ALMS1Q8TCU4 4167 aa13.49□□□□□ -0.25
SHKBP1-227ENST00000602011 SCGNO76038 276 aa13.48□□□□□ -0.25
SHKBP1-227ENST00000602011 MYL9P24844 172 aa13.48□□□□□ -0.25
SHKBP1-227ENST00000602011 CD300EQ496F6 205 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-227ENST00000602011 GPHB5Q86YW7 130 aa13.48□□□□□ -0.25
SHKBP1-227ENST00000602011 AIFM2Q9BRQ8 373 aa13.48□□□□□ -0.25
SHKBP1-227ENST00000602011 OR51E2Q9H255 320 aa13.48□□□□□ -0.25
SHKBP1-227ENST00000602011 ZC4H2Q9NQZ6 224 aa13.48□□□□□ -0.25
SHKBP1-227ENST00000602011 OR2W1Q9Y3N9 320 aa13.48□□□□□ -0.25
SHKBP1-227ENST00000602011 IZUMO1RA6ND01 250 aa13.47□□□□□ -0.25
SHKBP1-227ENST00000602011 LINC00473A8K010 186 aa13.47□□□□□ -0.25
SHKBP1-227ENST00000602011 ZNF785A8K8V0 405 aa13.47□□□□□ -0.25
SHKBP1-227ENST00000602011 HLA-DQB1P01920 261 aa13.47□□□□□ -0.25
SHKBP1-227ENST00000602011 CRHBPP24387 322 aa13.47□□□□□ -0.25
SHKBP1-227ENST00000602011 C15orf32Q32M92 178 aa13.47□□□□□ -0.25
SHKBP1-227ENST00000602011 SLC16A13Q7RTY0 426 aa13.47□□□□□ -0.25
SHKBP1-227ENST00000602011 C5orf30Q96GV9 206 aa13.47□□□□□ -0.25
SHKBP1-227ENST00000602011 HSD17B10Q99714 261 aaKnown RBP13.47□□□□□ -0.25
SHKBP1-227ENST00000602011 ADAM30Q9UKF2 790 aa13.47□□□□□ -0.25
SHKBP1-227ENST00000602011 BLOC1S6Q9UL45 172 aa13.47□□□□□ -0.25
SHKBP1-227ENST00000602011 DPPA5A6NC42 116 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 NPIPB5A8MRT5 1133 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 OR11H12B2RN74 326 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 FCGR3BO75015 233 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 RBMXL2O75526 392 aaKnown RBP13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 SAA1P0DJI8 122 aaPredicted RBP13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 APELAP0DMC3 54 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 FOLR2P14207 255 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 RAB3BP20337 219 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 AQP4P55087 323 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 ZNF45Q02386 682 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 KLK9Q2XQG4 91 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 ANKRD55Q3KP44 614 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 FAM106AQ4KMX7 169 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 IDO2Q6ZQW0 420 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 ZNF367Q7RTV3 350 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 OR2A7Q96R45 310 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 KRTAP17-1Q9BYP8 105 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 KLK9Q9UKQ9 250 aa13.46□□□□□ -0.25
SHKBP1-227ENST00000602011 A0A075B6Q4 140 aa13.45□□□□□ -0.26
SHKBP1-227ENST00000602011 TRDV1A0A1B0GX56 115 aa13.45□□□□□ -0.26
SHKBP1-227ENST00000602011 C2orf70A6NJV1 201 aa13.45□□□□□ -0.26
SHKBP1-227ENST00000602011 HIST1H1BP16401 226 aaKnown RBP13.45□□□□□ -0.26
SHKBP1-227ENST00000602011 PLA2G7Q13093 441 aa13.45□□□□□ -0.26
SHKBP1-227ENST00000602011 TBCEQ15813 527 aaPredicted RBP13.45□□□□□ -0.26
SHKBP1-227ENST00000602011 OR4A47Q6IF82 309 aa13.45□□□□□ -0.26
SHKBP1-227ENST00000602011 CNIH2Q6PI25 160 aa13.45□□□□□ -0.26
SHKBP1-227ENST00000602011 IZUMO2Q6UXV1 221 aa13.45□□□□□ -0.26
SHKBP1-227ENST00000602011 KCTD9Q7L273 389 aa13.45□□□□□ -0.26
SHKBP1-227ENST00000602011 OR4S2Q8NH73 311 aa13.45□□□□□ -0.26
SHKBP1-227ENST00000602011 PLEKHA3Q9HB20 300 aa13.45□□□□□ -0.26
SHKBP1-227ENST00000602011 RETNQ9HD89 108 aa13.45□□□□□ -0.26
SHKBP1-227ENST00000602011 SLC2A9Q9NRM0 540 aa13.45□□□□□ -0.26
SHKBP1-227ENST00000602011 RAB26Q9ULW5 256 aa13.45□□□□□ -0.26
SHKBP1-227ENST00000602011 RBMX2Q9Y388 322 aaKnown RBP13.45□□□□□ -0.26
SHKBP1-227ENST00000602011 HRASP01112 189 aa13.44□□□□□ -0.26
SHKBP1-227ENST00000602011 CRYGCP07315 174 aa13.44□□□□□ -0.26
SHKBP1-227ENST00000602011 CDNFQ49AH0 187 aa13.44□□□□□ -0.26
SHKBP1-227ENST00000602011 HACD4Q5VWC8 232 aa13.44□□□□□ -0.26
SHKBP1-227ENST00000602011 ZNF66Q6ZN08 573 aa13.44□□□□□ -0.26
SHKBP1-227ENST00000602011 TMEM167AQ8TBQ9 72 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms