RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 A0A1B0GU03 582 aa14.95□□□□□ -0.02
SSBP4-212ENST00000601919 FAM90A9PA6NNJ1 464 aa14.95□□□□□ -0.02
SSBP4-212ENST00000601919 CCSO14618 274 aa14.95□□□□□ -0.02
SSBP4-212ENST00000601919 CCNKO75909 580 aa14.95□□□□□ -0.02
SSBP4-212ENST00000601919 MOSP00540 346 aa14.95□□□□□ -0.02
SSBP4-212ENST00000601919 CD99P14209 185 aa14.95□□□□□ -0.02
SSBP4-212ENST00000601919 CXCL3P19876 107 aa14.95□□□□□ -0.02
SSBP4-212ENST00000601919 C2orf68Q2NKX9 166 aa14.95□□□□□ -0.02
SSBP4-212ENST00000601919 NMSQ5H8A3 153 aa14.95□□□□□ -0.02
SSBP4-212ENST00000601919 C9orf139Q6ZV77 190 aa14.95□□□□□ -0.02
SSBP4-212ENST00000601919 THNSL2Q86YJ6 484 aa14.95□□□□□ -0.02
SSBP4-212ENST00000601919 TMEM160Q9NX00 188 aa14.95□□□□□ -0.02
SSBP4-212ENST00000601919 IGKV1D-33P01593 117 aa14.94□□□□□ -0.02
SSBP4-212ENST00000601919 IGKV1-33P01594 117 aa14.94□□□□□ -0.02
SSBP4-212ENST00000601919 IGKV1-5P01602 117 aa14.94□□□□□ -0.02
SSBP4-212ENST00000601919 GIPP09681 153 aaPredicted RBP14.94□□□□□ -0.02
SSBP4-212ENST00000601919 CD83Q01151 205 aa14.94□□□□□ -0.02
SSBP4-212ENST00000601919 HES1Q14469 280 aa14.94□□□□□ -0.02
SSBP4-212ENST00000601919 AANATQ16613 207 aa14.94□□□□□ -0.02
SSBP4-212ENST00000601919 IAH1Q2TAA2 248 aaPredicted RBP14.94□□□□□ -0.02
SSBP4-212ENST00000601919 VMA21Q3ZAQ7 101 aa14.94□□□□□ -0.02
SSBP4-212ENST00000601919 FAM120AOSQ5T036 256 aa14.94□□□□□ -0.02
SSBP4-212ENST00000601919 NMES1Q9C002 83 aa14.94□□□□□ -0.02
SSBP4-212ENST00000601919 CACFD1Q9UGQ2 172 aa14.94□□□□□ -0.02
SSBP4-212ENST00000601919 SNAPC5O75971 98 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 OR2A4O95047 310 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 SPDEFO95238 335 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 SIX6O95475 246 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 SNRNP70P08621 437 aaKnown RBP14.93□□□□□ -0.02
SSBP4-212ENST00000601919 SRP14P37108 136 aaKnown RBP14.93□□□□□ -0.02
SSBP4-212ENST00000601919 H2BFSP57053 126 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 RAP2BP61225 183 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 SCGB2A2Q13296 93 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 EBI3Q14213 229 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 SMCO1Q147U7 214 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 LRRC75BQ2VPJ9 315 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 SSX9Q7RTT3 188 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 OR4A5Q8NH83 315 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 GPR146Q96CH1 333 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 OR2A7Q96R45 310 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 TMUB1Q9BVT8 246 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 CHIAQ9BZP6 476 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 RANBP3Q9H6Z4 567 aaPredicted RBP14.93□□□□□ -0.02
SSBP4-212ENST00000601919 TMEM140Q9NV12 185 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 COA4Q9NYJ1 87 aa14.93□□□□□ -0.02
SSBP4-212ENST00000601919 CSPG4Q6UVK1 2322 aa14.92□□□□□ -0.02
SSBP4-212ENST00000601919 P0C879 139 aa14.92□□□□□ -0.02
SSBP4-212ENST00000601919 UBE2KP61086 200 aa14.92□□□□□ -0.02
SSBP4-212ENST00000601919 SRSF4Q08170 494 aaKnown RBP14.92□□□□□ -0.02
SSBP4-212ENST00000601919 OR8H1Q8NGG4 311 aa14.92□□□□□ -0.02
SSBP4-212ENST00000601919 EAF1Q96JC9 268 aaPredicted RBP14.92□□□□□ -0.02
SSBP4-212ENST00000601919 OR10C1Q96KK4 312 aa14.92□□□□□ -0.02
SSBP4-212ENST00000601919 ZFP57Q9NU63 452 aa14.92□□□□□ -0.02
SSBP4-212ENST00000601919 BET1LQ9NYM9 111 aa14.92□□□□□ -0.02
SSBP4-212ENST00000601919 C1RLQ9NZP8 487 aa14.92□□□□□ -0.02
SSBP4-212ENST00000601919 GSKIPQ9P0R6 139 aa14.92□□□□□ -0.02
SSBP4-212ENST00000601919 CACNG5Q9UF02 275 aa14.92□□□□□ -0.02
SSBP4-212ENST00000601919 CSMD1Q96PZ7 3565 aa14.92□□□□□ -0.02
SSBP4-212ENST00000601919 RBMXL2O75526 392 aaKnown RBP14.91□□□□□ -0.02
SSBP4-212ENST00000601919 TMEM11P17152 192 aa14.91□□□□□ -0.02
SSBP4-212ENST00000601919 PAX6P26367 422 aa14.91□□□□□ -0.02
SSBP4-212ENST00000601919 OR4A47Q6IF82 309 aa14.91□□□□□ -0.02
SSBP4-212ENST00000601919 VKORC1L1Q8N0U8 176 aa14.91□□□□□ -0.02
SSBP4-212ENST00000601919 TEX45Q8NA69 505 aa14.91□□□□□ -0.02
SSBP4-212ENST00000601919 ZBTB8BQ8NAP8 495 aaPredicted RBP14.91□□□□□ -0.02
SSBP4-212ENST00000601919 OR4A16Q8NH70 328 aa14.91□□□□□ -0.02
SSBP4-212ENST00000601919 OR1S1Q8NH92 325 aa14.91□□□□□ -0.02
SSBP4-212ENST00000601919 SSX3Q99909 188 aa14.91□□□□□ -0.02
SSBP4-212ENST00000601919 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.91□□□□□ -0.02
SSBP4-212ENST00000601919 KIAA1456Q9P272 454 aa14.91□□□□□ -0.02
SSBP4-212ENST00000601919 TEX15Q9BXT5 2789 aa14.91□□□□□ -0.02
SSBP4-212ENST00000601919 SRRM4A7MD48 611 aaKnown RBP14.9□□□□□ -0.02
SSBP4-212ENST00000601919 MPTX1A8MV57 137 aa14.9□□□□□ -0.02
SSBP4-212ENST00000601919 SAA1P0DJI8 122 aaPredicted RBP14.9□□□□□ -0.02
SSBP4-212ENST00000601919 FGL1Q08830 312 aa14.9□□□□□ -0.02
SSBP4-212ENST00000601919 HNF4GQ14541 408 aa14.9□□□□□ -0.02
SSBP4-212ENST00000601919 MMDQ15546 238 aa14.9□□□□□ -0.02
SSBP4-212ENST00000601919 ZDHHC16Q969W1 377 aa14.9□□□□□ -0.02
SSBP4-212ENST00000601919 RANGRFQ9HD47 186 aaPredicted RBP14.9□□□□□ -0.02
SSBP4-212ENST00000601919 ZANQ9Y493 2812 aa14.9□□□□□ -0.02
SSBP4-212ENST00000601919 A0A0G2JRQ6 117 aa14.89□□□□□ -0.03
SSBP4-212ENST00000601919 NBR2O15453 112 aa14.89□□□□□ -0.03
SSBP4-212ENST00000601919 KBTBD11O94819 623 aa14.89□□□□□ -0.03
SSBP4-212ENST00000601919 LY6G6DO95868 133 aa14.89□□□□□ -0.03
SSBP4-212ENST00000601919 IGLV2-23P01705 113 aa14.89□□□□□ -0.03
SSBP4-212ENST00000601919 FGF2P09038 288 aa14.89□□□□□ -0.03
SSBP4-212ENST00000601919 PSG5Q15238 335 aa14.89□□□□□ -0.03
SSBP4-212ENST00000601919 TCTE3Q8IZS6 198 aa14.89□□□□□ -0.03
SSBP4-212ENST00000601919 PUSL1Q8N0Z8 303 aaKnown RBP14.89□□□□□ -0.03
SSBP4-212ENST00000601919 NPBQ8NG41 125 aa14.89□□□□□ -0.03
SSBP4-212ENST00000601919 ST6GAL2Q96JF0 529 aa14.89□□□□□ -0.03
SSBP4-212ENST00000601919 NEURL2Q9BR09 285 aa14.89□□□□□ -0.03
SSBP4-212ENST00000601919 FKBP11Q9NYL4 201 aa14.89□□□□□ -0.03
SSBP4-212ENST00000601919 PITPNC1Q9UKF7 332 aa14.89□□□□□ -0.03
SSBP4-212ENST00000601919 PRNDQ9UKY0 176 aa14.89□□□□□ -0.03
SSBP4-212ENST00000601919 BTBD17A6NE02 478 aa14.88□□□□□ -0.03
SSBP4-212ENST00000601919 FAM90A26D6RGX4 464 aa14.88□□□□□ -0.03
SSBP4-212ENST00000601919 UPK2O00526 184 aa14.88□□□□□ -0.03
SSBP4-212ENST00000601919 SLC25A17O43808 307 aa14.88□□□□□ -0.03
SSBP4-212ENST00000601919 PET100P0DJ07 73 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms