RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 KCNAB3O43448 404 aa14.35□□□□□ -0.11
SHKBP1-224ENST00000600718 APOA2P02652 100 aa14.35□□□□□ -0.11
SHKBP1-224ENST00000600718 COX7A1P24310 79 aa14.35□□□□□ -0.11
SHKBP1-224ENST00000600718 P2RY1P47900 373 aa14.35□□□□□ -0.11
SHKBP1-224ENST00000600718 PNKDQ8N490 385 aa14.35□□□□□ -0.11
SHKBP1-224ENST00000600718 OR11H6Q8NGC7 330 aa14.35□□□□□ -0.11
SHKBP1-224ENST00000600718 OR5AN1Q8NGI8 311 aa14.35□□□□□ -0.11
SHKBP1-224ENST00000600718 PSMG3-AS1Q96PY0 264 aa14.35□□□□□ -0.11
SHKBP1-224ENST00000600718 PCGF1Q9BSM1 259 aa14.35□□□□□ -0.11
SHKBP1-224ENST00000600718 C11orf1Q9H5F2 150 aa14.35□□□□□ -0.11
SHKBP1-224ENST00000600718 UNKLQ9H9P5 680 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-224ENST00000600718 POLR3KQ9Y2Y1 108 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-224ENST00000600718 KANTRA0A1W2PQU2 76 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 BUB1B-PAK6H3BSN5 160 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 APOC3P02656 99 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 HKR1P10072 659 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 RPL12P30050 165 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 DLX1P56177 255 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 MIDNQ504T8 468 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 TGIF2LXQ8IUE1 241 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 NABP2Q9BQ15 211 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 MAGT1Q9H0U3 335 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 COL12A1Q99715 3063 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 FAM208BQ5VWN6 2430 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 MSGN1A6NI15 193 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 HRASP01112 189 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 VAMP2P63027 116 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 GPR157Q5UAW9 335 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 ATRAIDQ6UW56 229 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 ZMAT5Q9UDW3 170 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 DCHS2Q6V1P9 2916 aa14.34□□□□□ -0.11
SHKBP1-224ENST00000600718 SPTAN1Q13813 2472 aaKnown RBP14.33□□□□□ -0.11
SHKBP1-224ENST00000600718 IGHV4-61A0A0C4DH41 118 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 H0YJW9 148 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 BCL2L11O43521 198 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 CHST1O43916 411 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 MC5RP33032 325 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 REG1BP48304 166 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 DIAPH2-AS1Q14236 149 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 POU2AF1Q16633 256 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 OR4P4Q8NGL7 312 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 SIRT7Q9NRC8 400 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 IGHV4-30-2A0A087WSY4 118 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 SSSCA1O60232 199 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 NXPH3O95157 252 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 GAPDHP04406 335 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 KRTAP10-9P60411 292 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 PRB3Q04118 309 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 RAB40CQ96S21 281 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 SIRPDQ9H106 197 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 MMP26Q9NRE1 261 aa14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 BEX4Q9NWD9 120 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-224ENST00000600718 TXNL1O43396 289 aa14.32□□□□□ -0.12
SHKBP1-224ENST00000600718 SYNGR2O43760 224 aa14.32□□□□□ -0.12
SHKBP1-224ENST00000600718 GPR137BO60478 399 aa14.32□□□□□ -0.12
SHKBP1-224ENST00000600718 H2AFB1P0C5Y9 115 aa14.32□□□□□ -0.12
SHKBP1-224ENST00000600718 VMO1Q7Z5L0 202 aa14.32□□□□□ -0.12
SHKBP1-224ENST00000600718 PDPNQ86YL7 162 aa14.32□□□□□ -0.12
SHKBP1-224ENST00000600718 OSR1Q8TAX0 266 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-224ENST00000600718 LHX4Q969G2 390 aa14.32□□□□□ -0.12
SHKBP1-224ENST00000600718 RHOVQ96L33 236 aa14.32□□□□□ -0.12
SHKBP1-224ENST00000600718 HSPB7Q9UBY9 170 aa14.32□□□□□ -0.12
SHKBP1-224ENST00000600718 LY6LH3BQJ8 138 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 H7C2Y5 167 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 MED6O75586 246 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 ARG1P05089 322 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 DVL1P1P54792 670 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 B2MP61769 119 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 HCP5Q6MZN7 132 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 SSX9Q7RTT3 188 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 OR2C3Q8N628 320 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 ST8SIA2Q92186 375 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 CACFD1Q9UGQ2 172 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 FAM157AC9JC47 383 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 SPDEFO95238 335 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 IGKV1-16P04430 117 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 OR9G9P0C7N8 305 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 SLC25A16P16260 332 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 HTR1DP28221 377 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 RAB13P51153 203 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 TNFRSF9Q07011 255 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 CLEC12BQ2HXU8 276 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 AARDQ4LEZ3 155 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 TMEM177Q53S58 311 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 VKORC1L1Q8N0U8 176 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 OR4A16Q8NH70 328 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 FLYWCH2Q96CP2 140 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 NKX6-2Q9C056 277 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 TMEM140Q9NV12 185 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 WASHC3Q9Y3C0 194 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 INSIG2Q9Y5U4 225 aa14.31□□□□□ -0.12
SHKBP1-224ENST00000600718 ODF3BA8MYP8 253 aa14.3□□□□□ -0.12
SHKBP1-224ENST00000600718 TEX46H3BTG2 121 aa14.3□□□□□ -0.12
SHKBP1-224ENST00000600718 TAAR5O14804 337 aa14.3□□□□□ -0.12
SHKBP1-224ENST00000600718 RBMXL2O75526 392 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-224ENST00000600718 PAX9P55771 341 aa14.3□□□□□ -0.12
SHKBP1-224ENST00000600718 RPL23AP62750 156 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-224ENST00000600718 OR4C13Q8NGP0 309 aa14.3□□□□□ -0.12
SHKBP1-224ENST00000600718 RPEQ96AT9 228 aa14.3□□□□□ -0.12
SHKBP1-224ENST00000600718 SLC25A31Q9H0C2 315 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms